RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 CABLES1Q8TDN4 633 aa24.54■■□□□ 1.52
NXF1-217ENST00000533671 TMC1Q8TDI8 760 aa24.53■■□□□ 1.52
NXF1-217ENST00000533671 TESK2Q96S53 571 aa24.52■■□□□ 1.52
NXF1-217ENST00000533671 TMF1P82094 1093 aa24.51■■□□□ 1.51
NXF1-217ENST00000533671 ABCA3Q99758 1704 aa24.5■■□□□ 1.51
NXF1-217ENST00000533671 POTEAQ6S8J7 498 aa24.5■■□□□ 1.51
NXF1-217ENST00000533671 ZNF692Q9BU19 519 aaPredicted RBP24.5■■□□□ 1.51
NXF1-217ENST00000533671 AKAP12Q02952 1782 aa24.49■■□□□ 1.51
NXF1-217ENST00000533671 NUTM2GQ5VZR2 741 aa24.49■■□□□ 1.51
NXF1-217ENST00000533671 ABTB2Q8N961 1025 aa24.49■■□□□ 1.51
NXF1-217ENST00000533671 BRD4O60885 1362 aaPredicted RBP24.48■■□□□ 1.51
NXF1-217ENST00000533671 PUS7Q96PZ0 661 aaKnown RBP24.48■■□□□ 1.51
NXF1-217ENST00000533671 USP6P35125 1406 aa24.47■■□□□ 1.51
NXF1-217ENST00000533671 USP21Q9UK80 565 aa24.46■■□□□ 1.51
NXF1-217ENST00000533671 KTN1Q86UP2 1357 aaKnown RBP24.45■■□□□ 1.5
NXF1-217ENST00000533671 EIF4G2P78344 907 aaKnown RBP eCLIP24.45■■□□□ 1.5
NXF1-217ENST00000533671 CDCA8Q53HL2 280 aa24.45■■□□□ 1.5
NXF1-217ENST00000533671 HDGFL2Q7Z4V5 671 aaPredicted RBP24.45■■□□□ 1.5
NXF1-217ENST00000533671 NLRP13Q86W25 1043 aa24.43■■□□□ 1.5
NXF1-217ENST00000533671 SLC12A5Q9H2X9 1139 aa24.43■■□□□ 1.5
NXF1-217ENST00000533671 QTRT2Q9H974 415 aaKnown RBP24.43■■□□□ 1.5
NXF1-217ENST00000533671 FNBP4Q8N3X1 1017 aaPredicted RBP24.42■■□□□ 1.5
NXF1-217ENST00000533671 TERF2IPQ9NYB0 399 aa24.42■■□□□ 1.5
NXF1-217ENST00000533671 CRYBG1Q9Y4K1 1723 aa24.41■■□□□ 1.5
NXF1-217ENST00000533671 MON2Q7Z3U7 1717 aa24.41■■□□□ 1.5
NXF1-217ENST00000533671 PHRF1Q9P1Y6 1649 aaKnown RBP24.4■■□□□ 1.5
NXF1-217ENST00000533671 RXRBP28702 533 aa24.4■■□□□ 1.5
NXF1-217ENST00000533671 NLRP6P59044 892 aa24.4■■□□□ 1.5
NXF1-217ENST00000533671 CPSF1Q10570 1443 aaKnown RBP24.4■■□□□ 1.5
NXF1-217ENST00000533671 NINLQ9Y2I6 1382 aa24.4■■□□□ 1.5
NXF1-217ENST00000533671 HSPA5P11021 654 aaKnown RBP24.39■■□□□ 1.49
NXF1-217ENST00000533671 TRPC5Q9UL62 973 aaPredicted RBP24.39■■□□□ 1.49
NXF1-217ENST00000533671 TTC21BQ7Z4L5 1316 aa24.38■■□□□ 1.49
NXF1-217ENST00000533671 TTC21AQ8NDW8 1320 aa24.37■■□□□ 1.49
NXF1-217ENST00000533671 PLCH1Q4KWH8 1693 aa24.37■■□□□ 1.49
NXF1-217ENST00000533671 FAM83GA6ND36 823 aa24.36■■□□□ 1.49
NXF1-217ENST00000533671 ZC3H6P61129 1189 aaKnown RBP24.36■■□□□ 1.49
NXF1-217ENST00000533671 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.36■■□□□ 1.49
NXF1-217ENST00000533671 POLR3GLQ9BT43 218 aa24.36■■□□□ 1.49
NXF1-217ENST00000533671 PRDM11Q9NQV5 511 aa24.36■■□□□ 1.49
NXF1-217ENST00000533671 SSH2Q76I76 1423 aa24.35■■□□□ 1.49
NXF1-217ENST00000533671 NWD2Q9ULI1 1742 aa24.35■■□□□ 1.49
NXF1-217ENST00000533671 COL14A1Q05707 1796 aaKnown RBP24.35■■□□□ 1.49
NXF1-217ENST00000533671 PIK3C2AO00443 1686 aa24.35■■□□□ 1.49
NXF1-217ENST00000533671 NRKQ7Z2Y5 1582 aa24.35■■□□□ 1.49
NXF1-217ENST00000533671 UNC5CLQ8IV45 518 aa24.35■■□□□ 1.49
NXF1-217ENST00000533671 CD163L1Q9NR16 1453 aa24.34■■□□□ 1.49
NXF1-217ENST00000533671 RBM6P78332 1123 aaKnown RBP24.34■■□□□ 1.49
NXF1-217ENST00000533671 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.34■■□□□ 1.49
NXF1-217ENST00000533671 SLIT2O94813 1529 aa24.34■■□□□ 1.49
NXF1-217ENST00000533671 BCL9LQ86UU0 1499 aa24.33■■□□□ 1.49
NXF1-217ENST00000533671 A0A1W2PP64 1363 aa24.33■■□□□ 1.49
NXF1-217ENST00000533671 USP19O94966 1318 aa24.33■■□□□ 1.48
NXF1-217ENST00000533671 GCP02774 474 aa24.32■■□□□ 1.48
NXF1-217ENST00000533671 KIAA0232Q92628 1395 aa24.31■■□□□ 1.48
NXF1-217ENST00000533671 ATRNO75882 1429 aa24.31■■□□□ 1.48
NXF1-217ENST00000533671 EDC4Q6P2E9 1401 aaKnown RBP24.31■■□□□ 1.48
NXF1-217ENST00000533671 BTG4Q9NY30 223 aa24.31■■□□□ 1.48
NXF1-217ENST00000533671 CCDC9Q9Y3X0 531 aaKnown RBP24.31■■□□□ 1.48
NXF1-217ENST00000533671 ZBTB7CA1YPR0 619 aa24.3■■□□□ 1.48
NXF1-217ENST00000533671 SOCS7O14512 581 aa24.3■■□□□ 1.48
NXF1-217ENST00000533671 CHRNA2Q15822 529 aa24.3■■□□□ 1.48
NXF1-217ENST00000533671 ANKRD36BQ8N2N9 1353 aa24.29■■□□□ 1.48
NXF1-217ENST00000533671 SOX12O15370 315 aa24.28■■□□□ 1.48
NXF1-217ENST00000533671 NME9Q86XW9 330 aa24.27■■□□□ 1.48
NXF1-217ENST00000533671 KCNH5Q8NCM2 988 aa24.27■■□□□ 1.48
NXF1-217ENST00000533671 SLIT3O75094 1523 aa24.26■■□□□ 1.47
NXF1-217ENST00000533671 GJD4Q96KN9 370 aaPredicted RBP24.26■■□□□ 1.47
NXF1-217ENST00000533671 NRAPQ86VF7 1730 aa24.25■■□□□ 1.47
NXF1-217ENST00000533671 CDK12Q9NYV4 1490 aaPredicted RBP24.25■■□□□ 1.47
NXF1-217ENST00000533671 MYOM1P52179 1685 aa24.24■■□□□ 1.47
NXF1-217ENST00000533671 EVA1CP58658 441 aa24.24■■□□□ 1.47
NXF1-217ENST00000533671 VPS72Q15906 364 aa24.24■■□□□ 1.47
NXF1-217ENST00000533671 ZRANB1Q9UGI0 708 aa24.24■■□□□ 1.47
NXF1-217ENST00000533671 CPDO75976 1380 aa24.24■■□□□ 1.47
NXF1-217ENST00000533671 STRN4Q9NRL3 753 aa24.22■■□□□ 1.47
NXF1-217ENST00000533671 USP31Q70CQ4 1352 aa24.21■■□□□ 1.47
NXF1-217ENST00000533671 USP54Q70EL1 1684 aa24.2■■□□□ 1.46
NXF1-217ENST00000533671 RGS12O14924 1447 aa24.19■■□□□ 1.46
NXF1-217ENST00000533671 COG3Q96JB2 828 aa24.19■■□□□ 1.46
NXF1-217ENST00000533671 GLI3P10071 1580 aa24.18■■□□□ 1.46
NXF1-217ENST00000533671 A0A0G2JS52 829 aa24.17■■□□□ 1.46
NXF1-217ENST00000533671 MYT1Q01538 1121 aa24.17■■□□□ 1.46
NXF1-217ENST00000533671 KIF20BQ96Q89 1820 aa24.17■■□□□ 1.46
NXF1-217ENST00000533671 LMO7Q8WWI1 1683 aa24.16■■□□□ 1.46
NXF1-217ENST00000533671 CAMTA1Q9Y6Y1 1673 aa24.15■■□□□ 1.46
NXF1-217ENST00000533671 ARHGEF25Q86VW2 580 aa24.15■■□□□ 1.46
NXF1-217ENST00000533671 AATKQ6ZMQ8 1374 aa24.15■■□□□ 1.46
NXF1-217ENST00000533671 LTN1O94822 1766 aa24.14■■□□□ 1.46
NXF1-217ENST00000533671 NSD3Q9BZ95 1437 aa24.14■■□□□ 1.45
NXF1-217ENST00000533671 NFAT5O94916 1531 aa24.14■■□□□ 1.45
NXF1-217ENST00000533671 RGPD5Q99666 1765 aa24.14■■□□□ 1.45
NXF1-217ENST00000533671 OVOS2A0A0J9YW53 1432 aa24.13■■□□□ 1.45
NXF1-217ENST00000533671 OVOS2Q6IE36 1432 aa24.13■■□□□ 1.45
NXF1-217ENST00000533671 C11orf95C9JLR9 678 aaPredicted RBP24.13■■□□□ 1.45
NXF1-217ENST00000533671 SPATA31A5Q5VU36 1347 aa24.12■■□□□ 1.45
NXF1-217ENST00000533671 SPATA31A7Q8IWB4 1347 aa24.12■■□□□ 1.45
NXF1-217ENST00000533671 GGNBP2Q9H3C7 697 aa24.12■■□□□ 1.45
NXF1-217ENST00000533671 USP35Q9P2H5 1018 aa24.12■■□□□ 1.45
NXF1-217ENST00000533671 COL18A1P39060 1754 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms