RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 AKAP12Q02952 1782 aa20.26■□□□□ 0.83
SF3B2-214ENST00000533595 CD163L1Q9NR16 1453 aa20.26■□□□□ 0.83
SF3B2-214ENST00000533595 KTN1Q86UP2 1357 aaKnown RBP20.26■□□□□ 0.83
SF3B2-214ENST00000533595 C11orf95C9JLR9 678 aaPredicted RBP20.25■□□□□ 0.83
SF3B2-214ENST00000533595 COL22A1Q8NFW1 1626 aaPredicted RBP20.24■□□□□ 0.83
SF3B2-214ENST00000533595 ALS2Q96Q42 1657 aa20.24■□□□□ 0.83
SF3B2-214ENST00000533595 A0A1W2PP64 1363 aa20.23■□□□□ 0.83
SF3B2-214ENST00000533595 NUTM2BA6NNL0 878 aaPredicted RBP20.23■□□□□ 0.83
SF3B2-214ENST00000533595 NUTM2EB1AL46 878 aaPredicted RBP20.23■□□□□ 0.83
SF3B2-214ENST00000533595 NUTM2AQ8IVF1 878 aaPredicted RBP20.23■□□□□ 0.83
SF3B2-214ENST00000533595 MON2Q7Z3U7 1717 aa20.22■□□□□ 0.83
SF3B2-214ENST00000533595 SSH2Q76I76 1423 aa20.22■□□□□ 0.83
SF3B2-214ENST00000533595 ANKRD36BQ8N2N9 1353 aa20.21■□□□□ 0.83
SF3B2-214ENST00000533595 ABTB2Q8N961 1025 aa20.21■□□□□ 0.83
SF3B2-214ENST00000533595 MYOM1P52179 1685 aa20.21■□□□□ 0.83
SF3B2-214ENST00000533595 KIF7Q2M1P5 1343 aa20.21■□□□□ 0.83
SF3B2-214ENST00000533595 TTC21BQ7Z4L5 1316 aa20.21■□□□□ 0.83
SF3B2-214ENST00000533595 TTC21AQ8NDW8 1320 aa20.2■□□□□ 0.82
SF3B2-214ENST00000533595 MED1Q15648 1581 aaPredicted RBP20.19■□□□□ 0.82
SF3B2-214ENST00000533595 NRKQ7Z2Y5 1582 aa20.19■□□□□ 0.82
SF3B2-214ENST00000533595 LRP6O75581 1613 aa20.19■□□□□ 0.82
SF3B2-214ENST00000533595 EDC4Q6P2E9 1401 aaKnown RBP20.19■□□□□ 0.82
SF3B2-214ENST00000533595 PLEKHG5O94827 1062 aa20.18■□□□□ 0.82
SF3B2-214ENST00000533595 NUTM2GQ5VZR2 741 aa20.18■□□□□ 0.82
SF3B2-214ENST00000533595 CABLES1Q8TDN4 633 aa20.18■□□□□ 0.82
SF3B2-214ENST00000533595 HAP1P54257 671 aaPredicted RBP20.17■□□□□ 0.82
SF3B2-214ENST00000533595 MEX3CQ5U5Q3 659 aaKnown RBP20.17■□□□□ 0.82
SF3B2-214ENST00000533595 NLRP13Q86W25 1043 aa20.17■□□□□ 0.82
SF3B2-214ENST00000533595 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.17■□□□□ 0.82
SF3B2-214ENST00000533595 CCDC7Q96M83 1385 aa20.16■□□□□ 0.82
SF3B2-214ENST00000533595 ADAMTS2O95450 1211 aa20.15■□□□□ 0.82
SF3B2-214ENST00000533595 NLRP6P59044 892 aa20.15■□□□□ 0.82
SF3B2-214ENST00000533595 WASHC2AQ641Q2 1341 aa20.15■□□□□ 0.82
SF3B2-214ENST00000533595 PIK3C2AO00443 1686 aa20.14■□□□□ 0.81
SF3B2-214ENST00000533595 ABCA3Q99758 1704 aa20.13■□□□□ 0.81
SF3B2-214ENST00000533595 NME9Q86XW9 330 aa20.13■□□□□ 0.81
SF3B2-214ENST00000533595 USP19O94966 1318 aa20.12■□□□□ 0.81
SF3B2-214ENST00000533595 CARD14Q9BXL6 1004 aa20.12■□□□□ 0.81
SF3B2-214ENST00000533595 CRYBG1Q9Y4K1 1723 aa20.12■□□□□ 0.81
SF3B2-214ENST00000533595 PANK3Q9H999 370 aa20.11■□□□□ 0.81
SF3B2-214ENST00000533595 NSD3Q9BZ95 1437 aa20.1■□□□□ 0.81
SF3B2-214ENST00000533595 USP31Q70CQ4 1352 aa20.09■□□□□ 0.81
SF3B2-214ENST00000533595 PHRF1Q9P1Y6 1649 aaKnown RBP20.09■□□□□ 0.81
SF3B2-214ENST00000533595 C8orf37Q96NL8 207 aa20.09■□□□□ 0.81
SF3B2-214ENST00000533595 PHF23Q9BUL5 403 aaPredicted RBP20.09■□□□□ 0.81
SF3B2-214ENST00000533595 ZRANB1Q9UGI0 708 aa20.09■□□□□ 0.81
SF3B2-214ENST00000533595 MARF1Q9Y4F3 1742 aaKnown RBP20.08■□□□□ 0.81
SF3B2-214ENST00000533595 GCP02774 474 aa20.08■□□□□ 0.81
SF3B2-214ENST00000533595 NGLY1Q96IV0 654 aa20.08■□□□□ 0.81
SF3B2-214ENST00000533595 SLIT3O75094 1523 aa20.07■□□□□ 0.8
SF3B2-214ENST00000533595 FYB1O15117 783 aa20.06■□□□□ 0.8
SF3B2-214ENST00000533595 USP54Q70EL1 1684 aa20.06■□□□□ 0.8
SF3B2-214ENST00000533595 CGNL1Q0VF96 1302 aa20.05■□□□□ 0.8
SF3B2-214ENST00000533595 OVOS2A0A0J9YW53 1432 aa20.05■□□□□ 0.8
SF3B2-214ENST00000533595 OVOS2Q6IE36 1432 aa20.05■□□□□ 0.8
SF3B2-214ENST00000533595 ZC3H6P61129 1189 aaKnown RBP20.05■□□□□ 0.8
SF3B2-214ENST00000533595 KCNH5Q8NCM2 988 aa20.05■□□□□ 0.8
SF3B2-214ENST00000533595 COG3Q96JB2 828 aa20.05■□□□□ 0.8
SF3B2-214ENST00000533595 AFF2P51816 1311 aa20.04■□□□□ 0.8
SF3B2-214ENST00000533595 GGNBP2Q9H3C7 697 aa20.04■□□□□ 0.8
SF3B2-214ENST00000533595 PRDM11Q9NQV5 511 aa20.04■□□□□ 0.8
SF3B2-214ENST00000533595 KIAA0232Q92628 1395 aa20.04■□□□□ 0.8
SF3B2-214ENST00000533595 FAM83GA6ND36 823 aa20.03■□□□□ 0.8
SF3B2-214ENST00000533595 SOX12O15370 315 aa20.03■□□□□ 0.8
SF3B2-214ENST00000533595 KIF20BQ96Q89 1820 aa20.03■□□□□ 0.8
SF3B2-214ENST00000533595 FNBP4Q8N3X1 1017 aaPredicted RBP20.02■□□□□ 0.8
SF3B2-214ENST00000533595 KNSTRNQ9Y448 316 aa20.02■□□□□ 0.8
SF3B2-214ENST00000533595 CPDO75976 1380 aa20.02■□□□□ 0.8
SF3B2-214ENST00000533595 ZNF772Q68DY9 489 aaPredicted RBP20.01■□□□□ 0.79
SF3B2-214ENST00000533595 RGS17Q9UGC6 210 aaPredicted RBP20■□□□□ 0.79
SF3B2-214ENST00000533595 COL14A1Q05707 1796 aaKnown RBP20■□□□□ 0.79
SF3B2-214ENST00000533595 SLIT2O94813 1529 aa19.99■□□□□ 0.79
SF3B2-214ENST00000533595 NFAT5O94916 1531 aa19.99■□□□□ 0.79
SF3B2-214ENST00000533595 CHRNA2Q15822 529 aa19.99■□□□□ 0.79
SF3B2-214ENST00000533595 USP21Q9UK80 565 aa19.99■□□□□ 0.79
SF3B2-214ENST00000533595 ZBTB7CA1YPR0 619 aa19.98■□□□□ 0.79
SF3B2-214ENST00000533595 PLCH1Q4KWH8 1693 aa19.97■□□□□ 0.79
SF3B2-214ENST00000533595 PER1O15534 1290 aaPredicted RBP19.97■□□□□ 0.79
SF3B2-214ENST00000533595 ARHGEF25Q86VW2 580 aa19.97■□□□□ 0.79
SF3B2-214ENST00000533595 BTG4Q9NY30 223 aa19.97■□□□□ 0.79
SF3B2-214ENST00000533595 NSD2O96028 1365 aa19.96■□□□□ 0.79
SF3B2-214ENST00000533595 UNC5CLQ8IV45 518 aa19.96■□□□□ 0.79
SF3B2-214ENST00000533595 BCL9LQ86UU0 1499 aa19.96■□□□□ 0.79
SF3B2-214ENST00000533595 NWD2Q9ULI1 1742 aa19.96■□□□□ 0.79
SF3B2-214ENST00000533595 AATKQ6ZMQ8 1374 aa19.95■□□□□ 0.79
SF3B2-214ENST00000533595 AMER1Q5JTC6 1135 aaPredicted RBP19.94■□□□□ 0.78
SF3B2-214ENST00000533595 QTRT2Q9H974 415 aaKnown RBP19.94■□□□□ 0.78
SF3B2-214ENST00000533595 POTEAQ6S8J7 498 aa19.93■□□□□ 0.78
SF3B2-214ENST00000533595 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.93■□□□□ 0.78
SF3B2-214ENST00000533595 ANKRD26Q9UPS8 1709 aa19.93■□□□□ 0.78
SF3B2-214ENST00000533595 LMO7Q8WWI1 1683 aa19.92■□□□□ 0.78
SF3B2-214ENST00000533595 ZNF316A6NFI3 1004 aaPredicted RBP19.92■□□□□ 0.78
SF3B2-214ENST00000533595 FBLN1P23142 703 aa19.92■□□□□ 0.78
SF3B2-214ENST00000533595 TRPC5Q9UL62 973 aaPredicted RBP19.92■□□□□ 0.78
SF3B2-214ENST00000533595 CAMTA1Q9Y6Y1 1673 aa19.91■□□□□ 0.78
SF3B2-214ENST00000533595 LTN1O94822 1766 aa19.91■□□□□ 0.78
SF3B2-214ENST00000533595 ATRNO75882 1429 aa19.91■□□□□ 0.78
SF3B2-214ENST00000533595 NRAPQ86VF7 1730 aa19.9■□□□□ 0.78
SF3B2-214ENST00000533595 COL18A1P39060 1754 aa19.9■□□□□ 0.78
SF3B2-214ENST00000533595 MORC1Q86VD1 984 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms