RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 NUTM2GQ5VZR2 741 aa24.04■■□□□ 1.44
NXF1-216ENST00000533499 COL16A1Q07092 1604 aaPredicted RBP24.03■■□□□ 1.44
NXF1-216ENST00000533499 ILDR1Q86SU0 546 aaPredicted RBP24.02■■□□□ 1.44
NXF1-216ENST00000533499 ABTB2Q8N961 1025 aa24.02■■□□□ 1.44
NXF1-216ENST00000533499 TTC21BQ7Z4L5 1316 aa24.02■■□□□ 1.44
NXF1-216ENST00000533499 MON2Q7Z3U7 1717 aa24.01■■□□□ 1.43
NXF1-216ENST00000533499 SPATA31A3Q5VYP0 1347 aa24.01■■□□□ 1.43
NXF1-216ENST00000533499 SBNO1A3KN83 1393 aa24.01■■□□□ 1.43
NXF1-216ENST00000533499 TNS3Q68CZ2 1445 aa24.01■■□□□ 1.43
NXF1-216ENST00000533499 DDX10Q13206 875 aaKnown RBP24■■□□□ 1.43
NXF1-216ENST00000533499 NSD3Q9BZ95 1437 aa24■■□□□ 1.43
NXF1-216ENST00000533499 TRPM3Q9HCF6 1732 aaPredicted RBP23.99■■□□□ 1.43
NXF1-216ENST00000533499 CNGB1Q14028 1251 aaPredicted RBP23.99■■□□□ 1.43
NXF1-216ENST00000533499 EDC4Q6P2E9 1401 aaKnown RBP23.99■■□□□ 1.43
NXF1-216ENST00000533499 CARD14Q9BXL6 1004 aa23.98■■□□□ 1.43
NXF1-216ENST00000533499 HAP1P54257 671 aaPredicted RBP23.97■■□□□ 1.43
NXF1-216ENST00000533499 NME9Q86XW9 330 aa23.97■■□□□ 1.43
NXF1-216ENST00000533499 BRD4O60885 1362 aaPredicted RBP23.96■■□□□ 1.43
NXF1-216ENST00000533499 JCADQ9P266 1359 aa23.96■■□□□ 1.43
NXF1-216ENST00000533499 TTC21AQ8NDW8 1320 aa23.96■■□□□ 1.43
NXF1-216ENST00000533499 NLRP6P59044 892 aa23.96■■□□□ 1.43
NXF1-216ENST00000533499 KNSTRNQ9Y448 316 aa23.96■■□□□ 1.43
NXF1-216ENST00000533499 ARHGEF10O15013 1369 aa23.95■■□□□ 1.42
NXF1-216ENST00000533499 NUTM2BA6NNL0 878 aaPredicted RBP23.95■■□□□ 1.42
NXF1-216ENST00000533499 NUTM2EB1AL46 878 aaPredicted RBP23.95■■□□□ 1.42
NXF1-216ENST00000533499 NUTM2AQ8IVF1 878 aaPredicted RBP23.95■■□□□ 1.42
NXF1-216ENST00000533499 CABLES1Q8TDN4 633 aa23.94■■□□□ 1.42
NXF1-216ENST00000533499 ZRANB1Q9UGI0 708 aa23.94■■□□□ 1.42
NXF1-216ENST00000533499 NRKQ7Z2Y5 1582 aa23.94■■□□□ 1.42
NXF1-216ENST00000533499 SSH2Q76I76 1423 aa23.93■■□□□ 1.42
NXF1-216ENST00000533499 PNPLA6Q8IY17 1366 aa23.93■■□□□ 1.42
NXF1-216ENST00000533499 SOX12O15370 315 aa23.92■■□□□ 1.42
NXF1-216ENST00000533499 NLRP13Q86W25 1043 aa23.92■■□□□ 1.42
NXF1-216ENST00000533499 GGNBP2Q9H3C7 697 aa23.92■■□□□ 1.42
NXF1-216ENST00000533499 ALS2Q96Q42 1657 aa23.92■■□□□ 1.42
NXF1-216ENST00000533499 CGNL1Q0VF96 1302 aa23.91■■□□□ 1.42
NXF1-216ENST00000533499 PIK3C2AO00443 1686 aa23.89■■□□□ 1.42
NXF1-216ENST00000533499 COG3Q96JB2 828 aa23.89■■□□□ 1.41
NXF1-216ENST00000533499 ZBTB7CA1YPR0 619 aa23.88■■□□□ 1.41
NXF1-216ENST00000533499 KIF20BQ96Q89 1820 aa23.88■■□□□ 1.41
NXF1-216ENST00000533499 SHPRHQ149N8 1683 aa23.88■■□□□ 1.41
NXF1-216ENST00000533499 FYB1O15117 783 aa23.87■■□□□ 1.41
NXF1-216ENST00000533499 ADAMTS2O95450 1211 aa23.86■■□□□ 1.41
NXF1-216ENST00000533499 CC2D1BQ5T0F9 858 aaKnown RBP23.86■■□□□ 1.41
NXF1-216ENST00000533499 MEX3CQ5U5Q3 659 aaKnown RBP23.85■■□□□ 1.41
NXF1-216ENST00000533499 SPATA31A6Q5VVP1 1343 aa23.84■■□□□ 1.41
NXF1-216ENST00000533499 PER1O15534 1290 aaPredicted RBP23.83■■□□□ 1.41
NXF1-216ENST00000533499 COL22A1Q8NFW1 1626 aaPredicted RBP23.82■■□□□ 1.4
NXF1-216ENST00000533499 TNNT2P45379 298 aaPredicted RBP23.82■■□□□ 1.4
NXF1-216ENST00000533499 MED1Q15648 1581 aaPredicted RBP23.82■■□□□ 1.4
NXF1-216ENST00000533499 USP31Q70CQ4 1352 aa23.81■■□□□ 1.4
NXF1-216ENST00000533499 ZC3H6P61129 1189 aaKnown RBP23.81■■□□□ 1.4
NXF1-216ENST00000533499 MORC1Q86VD1 984 aa23.81■■□□□ 1.4
NXF1-216ENST00000533499 USP19O94966 1318 aa23.8■■□□□ 1.4
NXF1-216ENST00000533499 GCP02774 474 aa23.79■■□□□ 1.4
NXF1-216ENST00000533499 AMER1Q5JTC6 1135 aaPredicted RBP23.79■■□□□ 1.4
NXF1-216ENST00000533499 OVOS2A0A0J9YW53 1432 aa23.78■■□□□ 1.4
NXF1-216ENST00000533499 OVOS2Q6IE36 1432 aa23.78■■□□□ 1.4
NXF1-216ENST00000533499 PHRF1Q9P1Y6 1649 aaKnown RBP23.78■■□□□ 1.4
NXF1-216ENST00000533499 KCNH5Q8NCM2 988 aa23.78■■□□□ 1.4
NXF1-216ENST00000533499 ABCA3Q99758 1704 aa23.78■■□□□ 1.4
NXF1-216ENST00000533499 MARF1Q9Y4F3 1742 aaKnown RBP23.77■■□□□ 1.4
NXF1-216ENST00000533499 FBLN1P23142 703 aa23.77■■□□□ 1.4
NXF1-216ENST00000533499 NSD2O96028 1365 aa23.77■■□□□ 1.4
NXF1-216ENST00000533499 PRDM11Q9NQV5 511 aa23.76■■□□□ 1.39
NXF1-216ENST00000533499 LRP6O75581 1613 aa23.75■■□□□ 1.39
NXF1-216ENST00000533499 C8orf37Q96NL8 207 aa23.75■■□□□ 1.39
NXF1-216ENST00000533499 CRYBG1Q9Y4K1 1723 aa23.75■■□□□ 1.39
NXF1-216ENST00000533499 SLIT3O75094 1523 aa23.74■■□□□ 1.39
NXF1-216ENST00000533499 ANKRD26Q9UPS8 1709 aa23.74■■□□□ 1.39
NXF1-216ENST00000533499 CHRNA2Q15822 529 aa23.74■■□□□ 1.39
NXF1-216ENST00000533499 KIAA0232Q92628 1395 aa23.74■■□□□ 1.39
NXF1-216ENST00000533499 NGLY1Q96IV0 654 aa23.72■■□□□ 1.39
NXF1-216ENST00000533499 USP54Q70EL1 1684 aa23.72■■□□□ 1.39
NXF1-216ENST00000533499 PPM1GO15355 546 aaPredicted RBP23.71■■□□□ 1.39
NXF1-216ENST00000533499 RRS1Q15050 365 aaKnown RBP23.71■■□□□ 1.39
NXF1-216ENST00000533499 NPC1L1Q9UHC9 1359 aa23.68■■□□□ 1.38
NXF1-216ENST00000533499 FAM83GA6ND36 823 aa23.68■■□□□ 1.38
NXF1-216ENST00000533499 AMPHP49418 695 aa23.68■■□□□ 1.38
NXF1-216ENST00000533499 NFAT5O94916 1531 aa23.68■■□□□ 1.38
NXF1-216ENST00000533499 LTN1O94822 1766 aa23.66■■□□□ 1.38
NXF1-216ENST00000533499 ARHGEF25Q86VW2 580 aa23.66■■□□□ 1.38
NXF1-216ENST00000533499 PHF23Q9BUL5 403 aaPredicted RBP23.66■■□□□ 1.38
NXF1-216ENST00000533499 MAP3K19Q56UN5 1328 aa23.65■■□□□ 1.38
NXF1-216ENST00000533499 EMILIN1Q9Y6C2 1016 aa23.65■■□□□ 1.38
NXF1-216ENST00000533499 CPDO75976 1380 aa23.65■■□□□ 1.38
NXF1-216ENST00000533499 MAP2P11137 1827 aaKnown RBP23.64■■□□□ 1.38
NXF1-216ENST00000533499 BTG4Q9NY30 223 aa23.64■■□□□ 1.37
NXF1-216ENST00000533499 STRN4Q9NRL3 753 aa23.63■■□□□ 1.37
NXF1-216ENST00000533499 COL14A1Q05707 1796 aaKnown RBP23.63■■□□□ 1.37
NXF1-216ENST00000533499 AFF2P51816 1311 aa23.62■■□□□ 1.37
NXF1-216ENST00000533499 EVA1CP58658 441 aa23.62■■□□□ 1.37
NXF1-216ENST00000533499 LTV1Q96GA3 475 aaPredicted RBP23.62■■□□□ 1.37
NXF1-216ENST00000533499 ANP32CO43423 234 aa23.61■■□□□ 1.37
NXF1-216ENST00000533499 POLKQ9UBT6 870 aa23.61■■□□□ 1.37
NXF1-216ENST00000533499 USP21Q9UK80 565 aa23.61■■□□□ 1.37
NXF1-216ENST00000533499 CSB-PGBD3P0DP91 1061 aa23.6■■□□□ 1.37
NXF1-216ENST00000533499 AATKQ6ZMQ8 1374 aa23.6■■□□□ 1.37
NXF1-216ENST00000533499 PLCH1Q4KWH8 1693 aa23.6■■□□□ 1.37
NXF1-216ENST00000533499 RALBP1Q15311 655 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms