RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 ATRNO75882 1429 aa17.31■□□□□ 0.36
SF3B2-213ENST00000533421 PPIP5K1Q6PFW1 1433 aa17.31■□□□□ 0.36
SF3B2-213ENST00000533421 ACEP12821 1306 aa17.31■□□□□ 0.36
SF3B2-213ENST00000533421 ABCA3Q99758 1704 aa17.31■□□□□ 0.36
SF3B2-213ENST00000533421 UNC5CLQ8IV45 518 aa17.3■□□□□ 0.36
SF3B2-213ENST00000533421 CABP2Q9NPB3 220 aa17.3■□□□□ 0.36
SF3B2-213ENST00000533421 SBNO2Q9Y2G9 1366 aa17.29■□□□□ 0.36
SF3B2-213ENST00000533421 SLC24A1O60721 1099 aa17.29■□□□□ 0.36
SF3B2-213ENST00000533421 PLEKHG5O94827 1062 aa17.29■□□□□ 0.36
SF3B2-213ENST00000533421 CABLES1Q8TDN4 633 aa17.29■□□□□ 0.36
SF3B2-213ENST00000533421 SLIT2O94813 1529 aa17.29■□□□□ 0.36
SF3B2-213ENST00000533421 NWD2Q9ULI1 1742 aa17.29■□□□□ 0.36
SF3B2-213ENST00000533421 BCL9LQ86UU0 1499 aa17.29■□□□□ 0.36
SF3B2-213ENST00000533421 ATAD2Q6PL18 1390 aa17.28■□□□□ 0.36
SF3B2-213ENST00000533421 GJD4Q96KN9 370 aaPredicted RBP17.27■□□□□ 0.36
SF3B2-213ENST00000533421 TIMELESSQ9UNS1 1208 aa17.27■□□□□ 0.36
SF3B2-213ENST00000533421 RGS12O14924 1447 aa17.27■□□□□ 0.35
SF3B2-213ENST00000533421 PLCH1Q4KWH8 1693 aa17.26■□□□□ 0.35
SF3B2-213ENST00000533421 ABTB2Q8N961 1025 aa17.25■□□□□ 0.35
SF3B2-213ENST00000533421 COL14A1Q05707 1796 aaKnown RBP17.25■□□□□ 0.35
SF3B2-213ENST00000533421 NLRP13Q86W25 1043 aa17.24■□□□□ 0.35
SF3B2-213ENST00000533421 ZNF692Q9BU19 519 aaPredicted RBP17.24■□□□□ 0.35
SF3B2-213ENST00000533421 PRDM11Q9NQV5 511 aa17.24■□□□□ 0.35
SF3B2-213ENST00000533421 CABP1Q9NZU7 370 aa17.24■□□□□ 0.35
SF3B2-213ENST00000533421 VPS72Q15906 364 aa17.23■□□□□ 0.35
SF3B2-213ENST00000533421 CCDC9Q9Y3X0 531 aaKnown RBP17.23■□□□□ 0.35
SF3B2-213ENST00000533421 CRYBG1Q9Y4K1 1723 aa17.22■□□□□ 0.35
SF3B2-213ENST00000533421 FAM83GA6ND36 823 aa17.22■□□□□ 0.35
SF3B2-213ENST00000533421 USP6P35125 1406 aa17.21■□□□□ 0.35
SF3B2-213ENST00000533421 PHRF1Q9P1Y6 1649 aaKnown RBP17.21■□□□□ 0.35
SF3B2-213ENST00000533421 UPF1Q92900 1129 aaKnown RBP eCLIP17.2■□□□□ 0.34
SF3B2-213ENST00000533421 BTG4Q9NY30 223 aa17.2■□□□□ 0.34
SF3B2-213ENST00000533421 NUTM2GQ5VZR2 741 aa17.19■□□□□ 0.34
SF3B2-213ENST00000533421 PUS7Q96PZ0 661 aaKnown RBP17.19■□□□□ 0.34
SF3B2-213ENST00000533421 USP19O94966 1318 aa17.18■□□□□ 0.34
SF3B2-213ENST00000533421 TTC21AQ8NDW8 1320 aa17.18■□□□□ 0.34
SF3B2-213ENST00000533421 KIAA0232Q92628 1395 aa17.17■□□□□ 0.34
SF3B2-213ENST00000533421 GLI3P10071 1580 aa17.17■□□□□ 0.34
SF3B2-213ENST00000533421 NRAPQ86VF7 1730 aa17.16■□□□□ 0.34
SF3B2-213ENST00000533421 NLRP6P59044 892 aa17.16■□□□□ 0.34
SF3B2-213ENST00000533421 HDGFL2Q7Z4V5 671 aaPredicted RBP17.16■□□□□ 0.34
SF3B2-213ENST00000533421 CPDO75976 1380 aa17.15■□□□□ 0.34
SF3B2-213ENST00000533421 KTN1Q86UP2 1357 aaKnown RBP17.15■□□□□ 0.34
SF3B2-213ENST00000533421 NRKQ7Z2Y5 1582 aa17.15■□□□□ 0.34
SF3B2-213ENST00000533421 AKAP12Q02952 1782 aa17.15■□□□□ 0.34
SF3B2-213ENST00000533421 A0A0G2JS52 829 aa17.15■□□□□ 0.34
SF3B2-213ENST00000533421 ZC3H6P61129 1189 aaKnown RBP17.15■□□□□ 0.34
SF3B2-213ENST00000533421 MYT1Q01538 1121 aa17.15■□□□□ 0.34
SF3B2-213ENST00000533421 NINLQ9Y2I6 1382 aa17.15■□□□□ 0.34
SF3B2-213ENST00000533421 GCP02774 474 aa17.14■□□□□ 0.33
SF3B2-213ENST00000533421 CCDC125Q86Z20 511 aa17.14■□□□□ 0.33
SF3B2-213ENST00000533421 TERF2IPQ9NYB0 399 aa17.14■□□□□ 0.33
SF3B2-213ENST00000533421 USP47Q96K76 1375 aa17.14■□□□□ 0.33
SF3B2-213ENST00000533421 CPSF1Q10570 1443 aaKnown RBP17.13■□□□□ 0.33
SF3B2-213ENST00000533421 ST20-MTHFSA0A0A6YYL1 179 aa17.13■□□□□ 0.33
SF3B2-213ENST00000533421 EVA1CP58658 441 aa17.13■□□□□ 0.33
SF3B2-213ENST00000533421 KCNH5Q8NCM2 988 aa17.13■□□□□ 0.33
SF3B2-213ENST00000533421 TMC1Q8TDI8 760 aa17.13■□□□□ 0.33
SF3B2-213ENST00000533421 TTC21BQ7Z4L5 1316 aa17.13■□□□□ 0.33
SF3B2-213ENST00000533421 SSH2Q76I76 1423 aa17.13■□□□□ 0.33
SF3B2-213ENST00000533421 ONECUT3O60422 494 aaPredicted RBP17.12■□□□□ 0.33
SF3B2-213ENST00000533421 CDCA8Q53HL2 280 aa17.12■□□□□ 0.33
SF3B2-213ENST00000533421 SEPT12Q8IYM1 358 aa17.12■□□□□ 0.33
SF3B2-213ENST00000533421 TMF1P82094 1093 aa17.11■□□□□ 0.33
SF3B2-213ENST00000533421 CHRNA2Q15822 529 aa17.11■□□□□ 0.33
SF3B2-213ENST00000533421 SPATA31A5Q5VU36 1347 aa17.11■□□□□ 0.33
SF3B2-213ENST00000533421 SPATA31A7Q8IWB4 1347 aa17.11■□□□□ 0.33
SF3B2-213ENST00000533421 MON2Q7Z3U7 1717 aa17.1■□□□□ 0.33
SF3B2-213ENST00000533421 STRN4Q9NRL3 753 aa17.1■□□□□ 0.33
SF3B2-213ENST00000533421 SLIT3O75094 1523 aa17.1■□□□□ 0.33
SF3B2-213ENST00000533421 PIK3C2AO00443 1686 aa17.1■□□□□ 0.33
SF3B2-213ENST00000533421 SRCAPQ6ZRS2 3230 aa17.09■□□□□ 0.33
SF3B2-213ENST00000533421 FAM98CQ17RN3 349 aaKnown RBP17.09■□□□□ 0.33
SF3B2-213ENST00000533421 KRT27Q7Z3Y8 459 aa17.09■□□□□ 0.33
SF3B2-213ENST00000533421 TESK2Q96S53 571 aa17.09■□□□□ 0.33
SF3B2-213ENST00000533421 EDC4Q6P2E9 1401 aaKnown RBP17.08■□□□□ 0.32
SF3B2-213ENST00000533421 AATKQ6ZMQ8 1374 aa17.07■□□□□ 0.32
SF3B2-213ENST00000533421 SPATA31A1Q5TZJ5 1347 aa17.07■□□□□ 0.32
SF3B2-213ENST00000533421 SF3B2Q13435 895 aaKnown RBP17.07■□□□□ 0.32
SF3B2-213ENST00000533421 ZBTB7CA1YPR0 619 aa17.06■□□□□ 0.32
SF3B2-213ENST00000533421 HSPA5P11021 654 aaKnown RBP17.06■□□□□ 0.32
SF3B2-213ENST00000533421 SLC12A5Q9H2X9 1139 aa17.06■□□□□ 0.32
SF3B2-213ENST00000533421 LMO7Q8WWI1 1683 aa17.06■□□□□ 0.32
SF3B2-213ENST00000533421 EP400Q96L91 3159 aa17.05■□□□□ 0.32
SF3B2-213ENST00000533421 BRWD3Q6RI45 1802 aa17.05■□□□□ 0.32
SF3B2-213ENST00000533421 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.05■□□□□ 0.32
SF3B2-213ENST00000533421 THRAP3Q9Y2W1 955 aaKnown RBP17.05■□□□□ 0.32
SF3B2-213ENST00000533421 BLMP54132 1417 aaPredicted RBP17.04■□□□□ 0.32
SF3B2-213ENST00000533421 CAMTA1Q9Y6Y1 1673 aa17.04■□□□□ 0.32
SF3B2-213ENST00000533421 A0A1W2PP64 1363 aa17.03■□□□□ 0.32
SF3B2-213ENST00000533421 USP31Q70CQ4 1352 aa17.03■□□□□ 0.32
SF3B2-213ENST00000533421 BARGINQ6ZT62 677 aa17.03■□□□□ 0.32
SF3B2-213ENST00000533421 TCP11L2Q8N4U5 519 aa17.03■□□□□ 0.32
SF3B2-213ENST00000533421 COL5A2P05997 1499 aaPredicted RBP17.03■□□□□ 0.32
SF3B2-213ENST00000533421 CD163L1Q9NR16 1453 aa17.03■□□□□ 0.32
SF3B2-213ENST00000533421 ABCC6O95255 1503 aa17.02■□□□□ 0.32
SF3B2-213ENST00000533421 USP54Q70EL1 1684 aa17.02■□□□□ 0.32
SF3B2-213ENST00000533421 THSD7AQ9UPZ6 1657 aa17.02■□□□□ 0.32
SF3B2-213ENST00000533421 USP35Q9P2H5 1018 aa17.02■□□□□ 0.32
SF3B2-213ENST00000533421 CRB1P82279 1406 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms