RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 PAK3O75914 559 aaPredicted RBP33.61■■■□□ 2.97
SMPD1-209ENST00000533196 CRYBG1Q9Y4K1 1723 aa33.61■■■□□ 2.97
SMPD1-209ENST00000533196 ROCK2O75116 1388 aaKnown RBP33.6■■■□□ 2.97
SMPD1-209ENST00000533196 ACEP12821 1306 aa33.59■■■□□ 2.97
SMPD1-209ENST00000533196 RALGAPBQ86X10 1494 aa33.59■■■□□ 2.97
SMPD1-209ENST00000533196 PLEKHG5O94827 1062 aa33.59■■■□□ 2.97
SMPD1-209ENST00000533196 SRPK2P78362 688 aaKnown RBP33.59■■■□□ 2.97
SMPD1-209ENST00000533196 VPS72Q15906 364 aa33.58■■■□□ 2.97
SMPD1-209ENST00000533196 NBPF8Q3BBV2 869 aa33.58■■■□□ 2.97
SMPD1-209ENST00000533196 GLI3P10071 1580 aa33.58■■■□□ 2.97
SMPD1-209ENST00000533196 FAM83GA6ND36 823 aa33.57■■■□□ 2.96
SMPD1-209ENST00000533196 COL14A1Q05707 1796 aaKnown RBP33.57■■■□□ 2.96
SMPD1-209ENST00000533196 PPIP5K1Q6PFW1 1433 aa33.53■■■□□ 2.96
SMPD1-209ENST00000533196 BRD4O60885 1362 aaPredicted RBP33.52■■■□□ 2.96
SMPD1-209ENST00000533196 CABP2Q9NPB3 220 aa33.52■■■□□ 2.96
SMPD1-209ENST00000533196 NRAPQ86VF7 1730 aa33.51■■■□□ 2.96
SMPD1-209ENST00000533196 EVC2Q86UK5 1308 aa33.51■■■□□ 2.95
SMPD1-209ENST00000533196 TONSLQ96HA7 1378 aa33.48■■■□□ 2.95
SMPD1-209ENST00000533196 PHRF1Q9P1Y6 1649 aaKnown RBP33.48■■■□□ 2.95
SMPD1-209ENST00000533196 BTG4Q9NY30 223 aa33.47■■■□□ 2.95
SMPD1-209ENST00000533196 ONECUT3O60422 494 aaPredicted RBP33.46■■■□□ 2.95
SMPD1-209ENST00000533196 CCDC9Q9Y3X0 531 aaKnown RBP33.45■■■□□ 2.95
SMPD1-209ENST00000533196 PRDM11Q9NQV5 511 aa33.44■■■□□ 2.94
SMPD1-209ENST00000533196 CCDC125Q86Z20 511 aa33.43■■■□□ 2.94
SMPD1-209ENST00000533196 ABTB2Q8N961 1025 aa33.43■■■□□ 2.94
SMPD1-209ENST00000533196 BRWD3Q6RI45 1802 aa33.42■■■□□ 2.94
SMPD1-209ENST00000533196 CABP1Q9NZU7 370 aa33.42■■■□□ 2.94
SMPD1-209ENST00000533196 SBNO2Q9Y2G9 1366 aa33.4■■■□□ 2.94
SMPD1-209ENST00000533196 SEPT12Q8IYM1 358 aa33.4■■■□□ 2.94
SMPD1-209ENST00000533196 KIAA0232Q92628 1395 aa33.39■■■□□ 2.94
SMPD1-209ENST00000533196 USP6P35125 1406 aa33.38■■■□□ 2.93
SMPD1-209ENST00000533196 USP19O94966 1318 aa33.38■■■□□ 2.93
SMPD1-209ENST00000533196 NUTM2GQ5VZR2 741 aa33.38■■■□□ 2.93
SMPD1-209ENST00000533196 NLRP13Q86W25 1043 aa33.38■■■□□ 2.93
SMPD1-209ENST00000533196 CARD11Q9BXL7 1154 aa33.38■■■□□ 2.93
SMPD1-209ENST00000533196 NRKQ7Z2Y5 1582 aa33.36■■■□□ 2.93
SMPD1-209ENST00000533196 CPDO75976 1380 aa33.34■■■□□ 2.93
SMPD1-209ENST00000533196 SPATA31A5Q5VU36 1347 aa33.33■■■□□ 2.93
SMPD1-209ENST00000533196 SPATA31A7Q8IWB4 1347 aa33.33■■■□□ 2.93
SMPD1-209ENST00000533196 ZNF692Q9BU19 519 aaPredicted RBP33.33■■■□□ 2.93
SMPD1-209ENST00000533196 ZC3H6P61129 1189 aaKnown RBP33.32■■■□□ 2.92
SMPD1-209ENST00000533196 EP400Q96L91 3159 aa33.31■■■□□ 2.92
SMPD1-209ENST00000533196 SSH2Q76I76 1423 aa33.31■■■□□ 2.92
SMPD1-209ENST00000533196 AKAP12Q02952 1782 aa33.31■■■□□ 2.92
SMPD1-209ENST00000533196 KRT27Q7Z3Y8 459 aa33.3■■■□□ 2.92
SMPD1-209ENST00000533196 CHRNA2Q15822 529 aa33.29■■■□□ 2.92
SMPD1-209ENST00000533196 GCP02774 474 aa33.28■■■□□ 2.92
SMPD1-209ENST00000533196 FAM98CQ17RN3 349 aaKnown RBP33.28■■■□□ 2.92
SMPD1-209ENST00000533196 BLMP54132 1417 aaPredicted RBP33.28■■■□□ 2.92
SMPD1-209ENST00000533196 A0A0G2JS52 829 aa33.25■■■□□ 2.91
SMPD1-209ENST00000533196 NLRP6P59044 892 aa33.25■■■□□ 2.91
SMPD1-209ENST00000533196 MYT1Q01538 1121 aa33.25■■■□□ 2.91
SMPD1-209ENST00000533196 SLIT3O75094 1523 aa33.24■■■□□ 2.91
SMPD1-209ENST00000533196 LMO7Q8WWI1 1683 aa33.24■■■□□ 2.91
SMPD1-209ENST00000533196 SPATA31A1Q5TZJ5 1347 aa33.24■■■□□ 2.91
SMPD1-209ENST00000533196 THSD7AQ9UPZ6 1657 aa33.23■■■□□ 2.91
SMPD1-209ENST00000533196 CPSF1Q10570 1443 aaKnown RBP33.23■■■□□ 2.91
SMPD1-209ENST00000533196 PIK3C2AO00443 1686 aa33.23■■■□□ 2.91
SMPD1-209ENST00000533196 TTC21AQ8NDW8 1320 aa33.22■■■□□ 2.91
SMPD1-209ENST00000533196 CAMTA1Q9Y6Y1 1673 aa33.21■■■□□ 2.91
SMPD1-209ENST00000533196 EVA1CP58658 441 aa33.21■■■□□ 2.91
SMPD1-209ENST00000533196 STRN4Q9NRL3 753 aa33.21■■■□□ 2.91
SMPD1-209ENST00000533196 TTC21BQ7Z4L5 1316 aa33.21■■■□□ 2.91
SMPD1-209ENST00000533196 PUS7Q96PZ0 661 aaKnown RBP33.19■■■□□ 2.9
SMPD1-209ENST00000533196 MON2Q7Z3U7 1717 aa33.17■■■□□ 2.9
SMPD1-209ENST00000533196 SLC24A1O60721 1099 aa33.17■■■□□ 2.9
SMPD1-209ENST00000533196 SF3B2Q13435 895 aaKnown RBP33.17■■■□□ 2.9
SMPD1-209ENST00000533196 KTN1Q86UP2 1357 aaKnown RBP33.17■■■□□ 2.9
SMPD1-209ENST00000533196 AATKQ6ZMQ8 1374 aa33.15■■■□□ 2.9
SMPD1-209ENST00000533196 BARGINQ6ZT62 677 aa33.14■■■□□ 2.9
SMPD1-209ENST00000533196 KCNH5Q8NCM2 988 aa33.13■■■□□ 2.89
SMPD1-209ENST00000533196 COL5A2P05997 1499 aaPredicted RBP33.12■■■□□ 2.89
SMPD1-209ENST00000533196 LARP1Q6PKG0 1096 aaKnown RBP33.11■■■□□ 2.89
SMPD1-209ENST00000533196 THRAP3Q9Y2W1 955 aaKnown RBP33.11■■■□□ 2.89
SMPD1-209ENST00000533196 CLSPNQ9HAW4 1339 aa33.1■■■□□ 2.89
SMPD1-209ENST00000533196 TIMELESSQ9UNS1 1208 aa33.1■■■□□ 2.89
SMPD1-209ENST00000533196 TCP11L2Q8N4U5 519 aa33.09■■■□□ 2.89
SMPD1-209ENST00000533196 ZRANB1Q9UGI0 708 aa33.09■■■□□ 2.89
SMPD1-209ENST00000533196 CD163L1Q9NR16 1453 aa33.08■■■□□ 2.89
SMPD1-209ENST00000533196 HDGFL2Q7Z4V5 671 aaPredicted RBP33.08■■■□□ 2.89
SMPD1-209ENST00000533196 COL18A1P39060 1754 aa33.08■■■□□ 2.89
SMPD1-209ENST00000533196 TMC1Q8TDI8 760 aa33.07■■■□□ 2.88
SMPD1-209ENST00000533196 TESK2Q96S53 571 aa33.07■■■□□ 2.88
SMPD1-209ENST00000533196 USP35Q9P2H5 1018 aa33.07■■■□□ 2.88
SMPD1-209ENST00000533196 USP54Q70EL1 1684 aa33.07■■■□□ 2.88
SMPD1-209ENST00000533196 RGPD1P0DJD0 1748 aa33.06■■■□□ 2.88
SMPD1-209ENST00000533196 ST20-MTHFSA0A0A6YYL1 179 aa33.06■■■□□ 2.88
SMPD1-209ENST00000533196 USP31Q70CQ4 1352 aa33.06■■■□□ 2.88
SMPD1-209ENST00000533196 CRB1P82279 1406 aa33.05■■■□□ 2.88
SMPD1-209ENST00000533196 TERF2IPQ9NYB0 399 aa33.05■■■□□ 2.88
SMPD1-209ENST00000533196 NINLQ9Y2I6 1382 aa33.05■■■□□ 2.88
SMPD1-209ENST00000533196 ARHGEF25Q86VW2 580 aa33.04■■■□□ 2.88
SMPD1-209ENST00000533196 ZBTB7CA1YPR0 619 aa33.03■■■□□ 2.88
SMPD1-209ENST00000533196 DEFB132Q7Z7B7 95 aa33.03■■■□□ 2.88
SMPD1-209ENST00000533196 SLC12A5Q9H2X9 1139 aa33.03■■■□□ 2.88
SMPD1-209ENST00000533196 BAG6P46379 1132 aa33.02■■■□□ 2.88
SMPD1-209ENST00000533196 FAM196AQ6ZSG2 479 aa33.01■■■□□ 2.87
SMPD1-209ENST00000533196 NFAT5O94916 1531 aa33.01■■■□□ 2.87
SMPD1-209ENST00000533196 ABCC6O95255 1503 aa33.01■■■□□ 2.87
SMPD1-209ENST00000533196 EDC4Q6P2E9 1401 aaKnown RBP33.01■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms