RNA–Protein interactions for RNA: ENST00000532838.1

CKLF-CMTM1-204, Transcript of CKLF-CMTM1 readthrough, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene CKLF-CMTM1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-204ENST00000532838 MARF1Q9Y4F3 1742 aaKnown RBP28.37■■■□□ 2.13
CKLF-CMTM1-204ENST00000532838 POTEAQ6S8J7 498 aa28.36■■■□□ 2.13
CKLF-CMTM1-204ENST00000532838 CABLES1Q8TDN4 633 aa28.35■■■□□ 2.13
CKLF-CMTM1-204ENST00000532838 ZNF692Q9BU19 519 aaPredicted RBP28.34■■■□□ 2.13
CKLF-CMTM1-204ENST00000532838 USP21Q9UK80 565 aa28.33■■■□□ 2.13
CKLF-CMTM1-204ENST00000532838 TMF1P82094 1093 aa28.32■■■□□ 2.12
CKLF-CMTM1-204ENST00000532838 ABTB2Q8N961 1025 aa28.32■■■□□ 2.12
CKLF-CMTM1-204ENST00000532838 TMC1Q8TDI8 760 aa28.32■■■□□ 2.12
CKLF-CMTM1-204ENST00000532838 PUS7Q96PZ0 661 aaKnown RBP28.32■■■□□ 2.12
CKLF-CMTM1-204ENST00000532838 USP6P35125 1406 aa28.3■■■□□ 2.12
CKLF-CMTM1-204ENST00000532838 TESK2Q96S53 571 aa28.3■■■□□ 2.12
CKLF-CMTM1-204ENST00000532838 ABCA3Q99758 1704 aa28.29■■■□□ 2.12
CKLF-CMTM1-204ENST00000532838 CDCA8Q53HL2 280 aa28.29■■■□□ 2.12
CKLF-CMTM1-204ENST00000532838 FNBP4Q8N3X1 1017 aaPredicted RBP28.29■■■□□ 2.12
CKLF-CMTM1-204ENST00000532838 QTRT2Q9H974 415 aaKnown RBP28.29■■■□□ 2.12
CKLF-CMTM1-204ENST00000532838 RXRBP28702 533 aa28.28■■■□□ 2.12
CKLF-CMTM1-204ENST00000532838 HDGFL2Q7Z4V5 671 aaPredicted RBP28.27■■■□□ 2.12
CKLF-CMTM1-204ENST00000532838 NLRP13Q86W25 1043 aa28.27■■■□□ 2.12
CKLF-CMTM1-204ENST00000532838 TRPC5Q9UL62 973 aaPredicted RBP28.27■■■□□ 2.12
CKLF-CMTM1-204ENST00000532838 NUTM2GQ5VZR2 741 aa28.26■■■□□ 2.11
CKLF-CMTM1-204ENST00000532838 TERF2IPQ9NYB0 399 aa28.26■■■□□ 2.11
CKLF-CMTM1-204ENST00000532838 KTN1Q86UP2 1357 aaKnown RBP28.25■■■□□ 2.11
CKLF-CMTM1-204ENST00000532838 SOCS7O14512 581 aa28.25■■■□□ 2.11
CKLF-CMTM1-204ENST00000532838 NINLQ9Y2I6 1382 aa28.24■■■□□ 2.11
CKLF-CMTM1-204ENST00000532838 AKAP12Q02952 1782 aa28.24■■■□□ 2.11
CKLF-CMTM1-204ENST00000532838 RBM6P78332 1123 aaKnown RBP28.22■■■□□ 2.11
CKLF-CMTM1-204ENST00000532838 EIF4G2P78344 907 aaKnown RBP eCLIP28.22■■■□□ 2.11
CKLF-CMTM1-204ENST00000532838 TTC21AQ8NDW8 1320 aa28.21■■■□□ 2.11
CKLF-CMTM1-204ENST00000532838 PRDM11Q9NQV5 511 aa28.21■■■□□ 2.11
CKLF-CMTM1-204ENST00000532838 CPSF1Q10570 1443 aaKnown RBP28.2■■■□□ 2.11
CKLF-CMTM1-204ENST00000532838 NLRP6P59044 892 aa28.2■■■□□ 2.1
CKLF-CMTM1-204ENST00000532838 UNC5CLQ8IV45 518 aa28.2■■■□□ 2.1
CKLF-CMTM1-204ENST00000532838 CRYBG1Q9Y4K1 1723 aa28.19■■■□□ 2.1
CKLF-CMTM1-204ENST00000532838 SLC12A5Q9H2X9 1139 aa28.19■■■□□ 2.1
CKLF-CMTM1-204ENST00000532838 TTC21BQ7Z4L5 1316 aa28.18■■■□□ 2.1
CKLF-CMTM1-204ENST00000532838 SLIT2O94813 1529 aa28.18■■■□□ 2.1
CKLF-CMTM1-204ENST00000532838 PHRF1Q9P1Y6 1649 aaKnown RBP28.18■■■□□ 2.1
CKLF-CMTM1-204ENST00000532838 PLCH1Q4KWH8 1693 aa28.17■■■□□ 2.1
CKLF-CMTM1-204ENST00000532838 BCL9LQ86UU0 1499 aa28.17■■■□□ 2.1
CKLF-CMTM1-204ENST00000532838 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.17■■■□□ 2.1
CKLF-CMTM1-204ENST00000532838 NWD2Q9ULI1 1742 aa28.17■■■□□ 2.1
CKLF-CMTM1-204ENST00000532838 COL14A1Q05707 1796 aaKnown RBP28.16■■■□□ 2.1
CKLF-CMTM1-204ENST00000532838 MON2Q7Z3U7 1717 aa28.16■■■□□ 2.1
CKLF-CMTM1-204ENST00000532838 FAM83GA6ND36 823 aa28.16■■■□□ 2.1
CKLF-CMTM1-204ENST00000532838 CDK12Q9NYV4 1490 aaPredicted RBP28.15■■■□□ 2.1
CKLF-CMTM1-204ENST00000532838 ATRNO75882 1429 aa28.15■■■□□ 2.1
CKLF-CMTM1-204ENST00000532838 SSH2Q76I76 1423 aa28.15■■■□□ 2.1
CKLF-CMTM1-204ENST00000532838 USP19O94966 1318 aa28.15■■■□□ 2.1
CKLF-CMTM1-204ENST00000532838 KIAA0232Q92628 1395 aa28.13■■■□□ 2.09
CKLF-CMTM1-204ENST00000532838 ZC3H6P61129 1189 aaKnown RBP28.13■■■□□ 2.09
CKLF-CMTM1-204ENST00000532838 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.13■■■□□ 2.09
CKLF-CMTM1-204ENST00000532838 BTG4Q9NY30 223 aa28.13■■■□□ 2.09
CKLF-CMTM1-204ENST00000532838 CCDC9Q9Y3X0 531 aaKnown RBP28.13■■■□□ 2.09
CKLF-CMTM1-204ENST00000532838 NRKQ7Z2Y5 1582 aa28.12■■■□□ 2.09
CKLF-CMTM1-204ENST00000532838 A0A1W2PP64 1363 aa28.11■■■□□ 2.09
CKLF-CMTM1-204ENST00000532838 EDC4Q6P2E9 1401 aaKnown RBP28.11■■■□□ 2.09
CKLF-CMTM1-204ENST00000532838 PIK3C2AO00443 1686 aa28.11■■■□□ 2.09
CKLF-CMTM1-204ENST00000532838 GCP02774 474 aa28.11■■■□□ 2.09
CKLF-CMTM1-204ENST00000532838 CD163L1Q9NR16 1453 aa28.1■■■□□ 2.09
CKLF-CMTM1-204ENST00000532838 GJD4Q96KN9 370 aaPredicted RBP28.1■■■□□ 2.09
CKLF-CMTM1-204ENST00000532838 HSPA5P11021 654 aaKnown RBP28.09■■■□□ 2.09
CKLF-CMTM1-204ENST00000532838 KCNH5Q8NCM2 988 aa28.09■■■□□ 2.09
CKLF-CMTM1-204ENST00000532838 VPS72Q15906 364 aa28.08■■■□□ 2.09
CKLF-CMTM1-204ENST00000532838 CPDO75976 1380 aa28.08■■■□□ 2.09
CKLF-CMTM1-204ENST00000532838 ANKRD36BQ8N2N9 1353 aa28.07■■■□□ 2.08
CKLF-CMTM1-204ENST00000532838 ZBTB7CA1YPR0 619 aa28.06■■■□□ 2.08
CKLF-CMTM1-204ENST00000532838 CHRNA2Q15822 529 aa28.06■■■□□ 2.08
CKLF-CMTM1-204ENST00000532838 SLIT3O75094 1523 aa28.05■■■□□ 2.08
CKLF-CMTM1-204ENST00000532838 POLR3GLQ9BT43 218 aa28.05■■■□□ 2.08
CKLF-CMTM1-204ENST00000532838 EVA1CP58658 441 aa28.04■■■□□ 2.08
CKLF-CMTM1-204ENST00000532838 RGS12O14924 1447 aa28.03■■■□□ 2.08
CKLF-CMTM1-204ENST00000532838 NRAPQ86VF7 1730 aa28.02■■■□□ 2.08
CKLF-CMTM1-204ENST00000532838 SOX12O15370 315 aa28.02■■■□□ 2.08
CKLF-CMTM1-204ENST00000532838 NME9Q86XW9 330 aa28.02■■■□□ 2.08
CKLF-CMTM1-204ENST00000532838 STRN4Q9NRL3 753 aa28.01■■■□□ 2.07
CKLF-CMTM1-204ENST00000532838 USP31Q70CQ4 1352 aa28■■■□□ 2.07
CKLF-CMTM1-204ENST00000532838 A0A0G2JS52 829 aa27.98■■■□□ 2.07
CKLF-CMTM1-204ENST00000532838 MYT1Q01538 1121 aa27.98■■■□□ 2.07
CKLF-CMTM1-204ENST00000532838 COG3Q96JB2 828 aa27.97■■■□□ 2.07
CKLF-CMTM1-204ENST00000532838 GLI3P10071 1580 aa27.97■■■□□ 2.07
CKLF-CMTM1-204ENST00000532838 AATKQ6ZMQ8 1374 aa27.96■■■□□ 2.07
CKLF-CMTM1-204ENST00000532838 USP54Q70EL1 1684 aa27.95■■■□□ 2.07
CKLF-CMTM1-204ENST00000532838 ZRANB1Q9UGI0 708 aa27.94■■■□□ 2.06
CKLF-CMTM1-204ENST00000532838 MYOM1P52179 1685 aa27.94■■■□□ 2.06
CKLF-CMTM1-204ENST00000532838 LMO7Q8WWI1 1683 aa27.93■■■□□ 2.06
CKLF-CMTM1-204ENST00000532838 SPATA31A5Q5VU36 1347 aa27.92■■■□□ 2.06
CKLF-CMTM1-204ENST00000532838 SPATA31A7Q8IWB4 1347 aa27.92■■■□□ 2.06
CKLF-CMTM1-204ENST00000532838 ARHGEF25Q86VW2 580 aa27.92■■■□□ 2.06
CKLF-CMTM1-204ENST00000532838 CAMTA1Q9Y6Y1 1673 aa27.91■■■□□ 2.06
CKLF-CMTM1-204ENST00000532838 SEPT12Q8IYM1 358 aa27.9■■■□□ 2.06
CKLF-CMTM1-204ENST00000532838 NFAT5O94916 1531 aa27.9■■■□□ 2.06
CKLF-CMTM1-204ENST00000532838 OVOS2A0A0J9YW53 1432 aa27.9■■■□□ 2.06
CKLF-CMTM1-204ENST00000532838 OVOS2Q6IE36 1432 aa27.9■■■□□ 2.06
CKLF-CMTM1-204ENST00000532838 FAM98CQ17RN3 349 aaKnown RBP27.89■■■□□ 2.06
CKLF-CMTM1-204ENST00000532838 USP35Q9P2H5 1018 aa27.88■■■□□ 2.05
CKLF-CMTM1-204ENST00000532838 COL5A2P05997 1499 aaPredicted RBP27.88■■■□□ 2.05
CKLF-CMTM1-204ENST00000532838 SPATA31A1Q5TZJ5 1347 aa27.88■■■□□ 2.05
CKLF-CMTM1-204ENST00000532838 NSD3Q9BZ95 1437 aa27.87■■■□□ 2.05
CKLF-CMTM1-204ENST00000532838 ONECUT3O60422 494 aaPredicted RBP27.86■■■□□ 2.05
CKLF-CMTM1-204ENST00000532838 LARP1Q6PKG0 1096 aaKnown RBP27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms