RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 IQSEC2Q5JU85 1478 aa11.3□□□□□ -0.6
TRIM49-202ENST00000532501 C1orf167Q5SNV9 1468 aa11.29□□□□□ -0.6
TRIM49-202ENST00000532501 EIF3AQ14152 1382 aaKnown RBP11.29□□□□□ -0.6
TRIM49-202ENST00000532501 WASLO00401 505 aaPredicted RBP11.29□□□□□ -0.6
TRIM49-202ENST00000532501 ORAI2Q96SN7 254 aa11.29□□□□□ -0.6
TRIM49-202ENST00000532501 CABP2Q9NPB3 220 aa11.29□□□□□ -0.6
TRIM49-202ENST00000532501 UBAP1LF5GYI3 381 aa11.28□□□□□ -0.6
TRIM49-202ENST00000532501 EIF4G2P78344 907 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRIM49-202ENST00000532501 DDX17Q92841 729 aaKnown RBP11.28□□□□□ -0.6
TRIM49-202ENST00000532501 CDK19Q9BWU1 502 aa11.28□□□□□ -0.6
TRIM49-202ENST00000532501 METRNQ9UJH8 293 aa11.28□□□□□ -0.6
TRIM49-202ENST00000532501 FMN2Q9NZ56 1722 aa11.28□□□□□ -0.6
TRIM49-202ENST00000532501 BRINP3Q76B58 766 aa11.26□□□□□ -0.61
TRIM49-202ENST00000532501 PHF12Q96QT6 1004 aa11.26□□□□□ -0.61
TRIM49-202ENST00000532501 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
TRIM49-202ENST00000532501 POTEJP0CG39 1038 aa11.26□□□□□ -0.61
TRIM49-202ENST00000532501 ATF3P18847 181 aa11.26□□□□□ -0.61
TRIM49-202ENST00000532501 PIP4K2BP78356 416 aa11.26□□□□□ -0.61
TRIM49-202ENST00000532501 CADPS2Q86UW7 1296 aa11.26□□□□□ -0.61
TRIM49-202ENST00000532501 SLAIN2Q9P270 581 aa11.26□□□□□ -0.61
TRIM49-202ENST00000532501 ANKARQ7Z5J8 1434 aa11.24□□□□□ -0.61
TRIM49-202ENST00000532501 NUDT16Q96DE0 195 aaKnown RBP11.24□□□□□ -0.61
TRIM49-202ENST00000532501 TOPAZ1Q8N9V7 1692 aa11.23□□□□□ -0.61
TRIM49-202ENST00000532501 SRPK2P78362 688 aaKnown RBP11.23□□□□□ -0.61
TRIM49-202ENST00000532501 PMFBP1Q8TBY8 1022 aa11.23□□□□□ -0.61
TRIM49-202ENST00000532501 EVC2Q86UK5 1308 aa11.23□□□□□ -0.61
TRIM49-202ENST00000532501 ROBO1Q9Y6N7 1651 aa11.22□□□□□ -0.61
TRIM49-202ENST00000532501 CD163L1Q9NR16 1453 aa11.22□□□□□ -0.61
TRIM49-202ENST00000532501 XPCQ01831 940 aaPredicted RBP11.22□□□□□ -0.61
TRIM49-202ENST00000532501 SLC39A7Q92504 469 aa11.22□□□□□ -0.61
TRIM49-202ENST00000532501 RGPD8O14715 1765 aaPredicted RBP11.22□□□□□ -0.61
TRIM49-202ENST00000532501 TOM1O60784 492 aa11.21□□□□□ -0.61
TRIM49-202ENST00000532501 ESCO1Q5FWF5 840 aa11.21□□□□□ -0.61
TRIM49-202ENST00000532501 SCUBE2Q9NQ36 999 aa11.21□□□□□ -0.61
TRIM49-202ENST00000532501 KIF7Q2M1P5 1343 aa11.21□□□□□ -0.61
TRIM49-202ENST00000532501 WASHC2AQ641Q2 1341 aa11.21□□□□□ -0.61
TRIM49-202ENST00000532501 PPIP5K1Q6PFW1 1433 aa11.21□□□□□ -0.62
TRIM49-202ENST00000532501 SLC12A5Q9H2X9 1139 aa11.2□□□□□ -0.62
TRIM49-202ENST00000532501 CABP1Q9NZU7 370 aa11.2□□□□□ -0.62
TRIM49-202ENST00000532501 PHF8Q9UPP1 1060 aa11.2□□□□□ -0.62
TRIM49-202ENST00000532501 FOXO3O43524 673 aa11.19□□□□□ -0.62
TRIM49-202ENST00000532501 C7P10643 843 aa11.19□□□□□ -0.62
TRIM49-202ENST00000532501 TMF1P82094 1093 aa11.19□□□□□ -0.62
TRIM49-202ENST00000532501 CCDC61Q9Y6R9 512 aa11.19□□□□□ -0.62
TRIM49-202ENST00000532501 CCDC7Q96M83 1385 aa11.19□□□□□ -0.62
TRIM49-202ENST00000532501 MYOM1P52179 1685 aa11.19□□□□□ -0.62
TRIM49-202ENST00000532501 HSPA1LP34931 641 aa11.18□□□□□ -0.62
TRIM49-202ENST00000532501 CDAN1Q8IWY9 1227 aa11.18□□□□□ -0.62
TRIM49-202ENST00000532501 POLR3GLQ9BT43 218 aa11.18□□□□□ -0.62
TRIM49-202ENST00000532501 CREBZFQ9NS37 354 aa11.18□□□□□ -0.62
TRIM49-202ENST00000532501 ATAD2Q6PL18 1390 aa11.18□□□□□ -0.62
TRIM49-202ENST00000532501 PXDNQ92626 1479 aa11.18□□□□□ -0.62
TRIM49-202ENST00000532501 AHDC1Q5TGY3 1603 aaPredicted RBP11.18□□□□□ -0.62
TRIM49-202ENST00000532501 POLR3AO14802 1390 aaPredicted RBP11.18□□□□□ -0.62
TRIM49-202ENST00000532501 ACEP12821 1306 aa11.18□□□□□ -0.62
TRIM49-202ENST00000532501 PLEKHG3A1L390 1219 aa11.18□□□□□ -0.62
TRIM49-202ENST00000532501 NHSL1Q5SYE7 1610 aa11.17□□□□□ -0.62
TRIM49-202ENST00000532501 CPSF1Q10570 1443 aaKnown RBP11.17□□□□□ -0.62
TRIM49-202ENST00000532501 A0A1W2PP64 1363 aa11.17□□□□□ -0.62
TRIM49-202ENST00000532501 COL16A1Q07092 1604 aaPredicted RBP11.16□□□□□ -0.62
TRIM49-202ENST00000532501 SSH2Q76I76 1423 aa11.16□□□□□ -0.62
TRIM49-202ENST00000532501 SOS2Q07890 1332 aaPredicted RBP11.16□□□□□ -0.62
TRIM49-202ENST00000532501 TMC1Q8TDI8 760 aa11.16□□□□□ -0.62
TRIM49-202ENST00000532501 ASTLQ6HA08 431 aaPredicted RBP11.15□□□□□ -0.62
TRIM49-202ENST00000532501 PUS7Q96PZ0 661 aaKnown RBP11.15□□□□□ -0.62
TRIM49-202ENST00000532501 CARD14Q9BXL6 1004 aa11.15□□□□□ -0.62
TRIM49-202ENST00000532501 USP6P35125 1406 aa11.14□□□□□ -0.63
TRIM49-202ENST00000532501 KIF1AQ12756 1690 aa11.14□□□□□ -0.63
TRIM49-202ENST00000532501 NGDNQ8NEJ9 315 aaKnown RBP11.14□□□□□ -0.63
TRIM49-202ENST00000532501 SOCS7O14512 581 aa11.13□□□□□ -0.63
TRIM49-202ENST00000532501 KRT28Q7Z3Y7 464 aa11.13□□□□□ -0.63
TRIM49-202ENST00000532501 TRPM3Q9HCF6 1732 aaPredicted RBP11.13□□□□□ -0.63
TRIM49-202ENST00000532501 NRKQ7Z2Y5 1582 aa11.13□□□□□ -0.63
TRIM49-202ENST00000532501 NPHP3Q7Z494 1330 aa11.12□□□□□ -0.63
TRIM49-202ENST00000532501 ITSN1Q15811 1721 aa11.12□□□□□ -0.63
TRIM49-202ENST00000532501 ATMINO43313 823 aaPredicted RBP11.12□□□□□ -0.63
TRIM49-202ENST00000532501 PNPLA6Q8IY17 1366 aa11.12□□□□□ -0.63
TRIM49-202ENST00000532501 ANKRD36BQ8N2N9 1353 aa11.12□□□□□ -0.63
TRIM49-202ENST00000532501 SPATA31A3Q5VYP0 1347 aa11.11□□□□□ -0.63
TRIM49-202ENST00000532501 TTC21BQ7Z4L5 1316 aa11.11□□□□□ -0.63
TRIM49-202ENST00000532501 PHLPP1O60346 1717 aa11.1□□□□□ -0.63
TRIM49-202ENST00000532501 NUTM2GQ5VZR2 741 aa11.1□□□□□ -0.63
TRIM49-202ENST00000532501 TNS3Q68CZ2 1445 aa11.1□□□□□ -0.63
TRIM49-202ENST00000532501 NME9Q86XW9 330 aa11.1□□□□□ -0.63
TRIM49-202ENST00000532501 NSD3Q9BZ95 1437 aa11.1□□□□□ -0.63
TRIM49-202ENST00000532501 PANK3Q9H999 370 aa11.1□□□□□ -0.63
TRIM49-202ENST00000532501 KTN1Q86UP2 1357 aaKnown RBP11.1□□□□□ -0.63
TRIM49-202ENST00000532501 AKAP12Q02952 1782 aa11.1□□□□□ -0.63
TRIM49-202ENST00000532501 MON2Q7Z3U7 1717 aa11.1□□□□□ -0.63
TRIM49-202ENST00000532501 PLEKHG5O94827 1062 aa11.09□□□□□ -0.63
TRIM49-202ENST00000532501 PSME1Q06323 249 aa11.09□□□□□ -0.63
TRIM49-202ENST00000532501 SBNO1A3KN83 1393 aa11.09□□□□□ -0.63
TRIM49-202ENST00000532501 NINLQ9Y2I6 1382 aa11.09□□□□□ -0.63
TRIM49-202ENST00000532501 PIK3C2AO00443 1686 aa11.09□□□□□ -0.63
TRIM49-202ENST00000532501 ALS2Q96Q42 1657 aa11.09□□□□□ -0.63
TRIM49-202ENST00000532501 CDCA8Q53HL2 280 aa11.09□□□□□ -0.63
TRIM49-202ENST00000532501 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRIM49-202ENST00000532501 CABLES1Q8TDN4 633 aa11.09□□□□□ -0.63
TRIM49-202ENST00000532501 LRP6O75581 1613 aa11.09□□□□□ -0.63
TRIM49-202ENST00000532501 MED1Q15648 1581 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms