RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 HDGFL1Q5TGJ6 251 aa13.81□□□□□ -0.2
PTPRK-221ENST00000532331 TRDNQ13061 729 aa13.81□□□□□ -0.2
PTPRK-221ENST00000532331 SAMD1Q6SPF0 538 aaPredicted RBP13.81□□□□□ -0.2
PTPRK-221ENST00000532331 STARD3NLO95772 234 aa13.81□□□□□ -0.2
PTPRK-221ENST00000532331 EXOC5O00471 708 aa13.8□□□□□ -0.2
PTPRK-221ENST00000532331 CPLX2Q6PUV4 134 aaKnown RBP13.8□□□□□ -0.2
PTPRK-221ENST00000532331 FOXD4L1Q9NU39 408 aa13.8□□□□□ -0.2
PTPRK-221ENST00000532331 UHRF1BP1LA0JNW5 1464 aa13.8□□□□□ -0.2
PTPRK-221ENST00000532331 KDM5BQ9UGL1 1544 aa13.8□□□□□ -0.2
PTPRK-221ENST00000532331 CNNM1Q9NRU3 951 aa13.8□□□□□ -0.2
PTPRK-221ENST00000532331 WWC1Q8IX03 1113 aa13.8□□□□□ -0.2
PTPRK-221ENST00000532331 BTBD11A6QL63 1104 aa13.8□□□□□ -0.2
PTPRK-221ENST00000532331 ERC2O15083 957 aa13.8□□□□□ -0.2
PTPRK-221ENST00000532331 FYB1O15117 783 aa13.8□□□□□ -0.2
PTPRK-221ENST00000532331 EIF4G3O43432 1585 aaKnown RBP13.79□□□□□ -0.2
PTPRK-221ENST00000532331 WDR62O43379 1518 aa13.79□□□□□ -0.2
PTPRK-221ENST00000532331 A2MP01023 1474 aa13.79□□□□□ -0.2
PTPRK-221ENST00000532331 CRBNQ96SW2 442 aa13.79□□□□□ -0.2
PTPRK-221ENST00000532331 BICDL1Q6ZP65 573 aa13.79□□□□□ -0.2
PTPRK-221ENST00000532331 MYL6BP14649 208 aa13.79□□□□□ -0.2
PTPRK-221ENST00000532331 NBPF8Q3BBV2 869 aa13.79□□□□□ -0.2
PTPRK-221ENST00000532331 ERICH2A1L162 156 aa13.79□□□□□ -0.2
PTPRK-221ENST00000532331 EXOC6Q8TAG9 804 aa13.79□□□□□ -0.2
PTPRK-221ENST00000532331 ADAMTS8Q9UP79 889 aa13.79□□□□□ -0.2
PTPRK-221ENST00000532331 FAM161AQ3B820 660 aa13.78□□□□□ -0.2
PTPRK-221ENST00000532331 GNL3LQ9NVN8 582 aaKnown RBP13.78□□□□□ -0.2
PTPRK-221ENST00000532331 WASHC4Q2M389 1173 aa13.78□□□□□ -0.2
PTPRK-221ENST00000532331 ZPR1O75312 459 aa13.78□□□□□ -0.2
PTPRK-221ENST00000532331 GNAI3P08754 354 aa13.78□□□□□ -0.2
PTPRK-221ENST00000532331 ADAMTS12P58397 1594 aa13.78□□□□□ -0.2
PTPRK-221ENST00000532331 GOLGA6L3A6NEY3 463 aa13.77□□□□□ -0.2
PTPRK-221ENST00000532331 NAIPQ13075 1403 aa13.77□□□□□ -0.2
PTPRK-221ENST00000532331 ADGRF5Q8IZF2 1346 aa13.77□□□□□ -0.2
PTPRK-221ENST00000532331 ZKSCAN1P17029 563 aaPredicted RBP13.77□□□□□ -0.2
PTPRK-221ENST00000532331 SF3A1Q15459 793 aaKnown RBP13.77□□□□□ -0.2
PTPRK-221ENST00000532331 TWISTNBQ3B726 338 aaPredicted RBP13.77□□□□□ -0.2
PTPRK-221ENST00000532331 TBC1D2BQ9UPU7 963 aa13.77□□□□□ -0.2
PTPRK-221ENST00000532331 FAM184AQ8NB25 1140 aa13.77□□□□□ -0.21
PTPRK-221ENST00000532331 BRD4O60885 1362 aaPredicted RBP13.77□□□□□ -0.21
PTPRK-221ENST00000532331 NOS1P29475 1434 aa13.76□□□□□ -0.21
PTPRK-221ENST00000532331 THOC2Q8NI27 1593 aaKnown RBP13.76□□□□□ -0.21
PTPRK-221ENST00000532331 LMTK3Q96Q04 1460 aa13.76□□□□□ -0.21
PTPRK-221ENST00000532331 CCAR1Q8IX12 1150 aaKnown RBP13.76□□□□□ -0.21
PTPRK-221ENST00000532331 ZNF652Q9Y2D9 606 aa13.76□□□□□ -0.21
PTPRK-221ENST00000532331 PHF14O94880 888 aa13.76□□□□□ -0.21
PTPRK-221ENST00000532331 TSHZ2Q9NRE2 1034 aa13.76□□□□□ -0.21
PTPRK-221ENST00000532331 NCKAP5LQ9HCH0 1330 aa13.76□□□□□ -0.21
PTPRK-221ENST00000532331 NCOA1Q15788 1441 aa13.76□□□□□ -0.21
PTPRK-221ENST00000532331 NPHP3Q7Z494 1330 aa13.75□□□□□ -0.21
PTPRK-221ENST00000532331 H3BQV1 296 aa13.75□□□□□ -0.21
PTPRK-221ENST00000532331 IFFO2Q5TF58 517 aa13.75□□□□□ -0.21
PTPRK-221ENST00000532331 MPHOSPH8Q99549 860 aa13.75□□□□□ -0.21
PTPRK-221ENST00000532331 GNAT3A8MTJ3 354 aa13.75□□□□□ -0.21
PTPRK-221ENST00000532331 GPATCH8Q9UKJ3 1502 aaKnown RBP13.75□□□□□ -0.21
PTPRK-221ENST00000532331 NFXL1Q6ZNB6 911 aa13.75□□□□□ -0.21
PTPRK-221ENST00000532331 NSD3Q9BZ95 1437 aa13.75□□□□□ -0.21
PTPRK-221ENST00000532331 ABCC2Q92887 1545 aa13.75□□□□□ -0.21
PTPRK-221ENST00000532331 AMOTQ4VCS5 1084 aa13.75□□□□□ -0.21
PTPRK-221ENST00000532331 RNF20Q5VTR2 975 aa13.75□□□□□ -0.21
PTPRK-221ENST00000532331 C8orf37Q96NL8 207 aa13.75□□□□□ -0.21
PTPRK-221ENST00000532331 PTCD1O75127 700 aaKnown RBP13.74□□□□□ -0.21
PTPRK-221ENST00000532331 MPRIPQ6WCQ1 1025 aa13.74□□□□□ -0.21
PTPRK-221ENST00000532331 PDE4AP27815 886 aa13.74□□□□□ -0.21
PTPRK-221ENST00000532331 TRIM29Q14134 588 aa13.74□□□□□ -0.21
PTPRK-221ENST00000532331 BCL11BQ9C0K0 894 aaPredicted RBP13.74□□□□□ -0.21
PTPRK-221ENST00000532331 SLC4A2P04920 1241 aa13.73□□□□□ -0.21
PTPRK-221ENST00000532331 NME9Q86XW9 330 aa13.73□□□□□ -0.21
PTPRK-221ENST00000532331 ABCC10Q5T3U5 1492 aa13.73□□□□□ -0.21
PTPRK-221ENST00000532331 ATP6V1DQ9Y5K8 247 aa13.73□□□□□ -0.21
PTPRK-221ENST00000532331 REC8O95072 547 aa13.73□□□□□ -0.21
PTPRK-221ENST00000532331 CPLX1O14810 134 aa13.73□□□□□ -0.21
PTPRK-221ENST00000532331 DDX11L8A8MPP1 907 aa13.72□□□□□ -0.21
PTPRK-221ENST00000532331 CLASRPQ8N2M8 674 aaKnown RBP13.72□□□□□ -0.21
PTPRK-221ENST00000532331 ANO2Q9NQ90 1003 aa13.72□□□□□ -0.21
PTPRK-221ENST00000532331 RBM5P52756 815 aaKnown RBP eCLIP13.72□□□□□ -0.21
PTPRK-221ENST00000532331 IKQ13123 557 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-221ENST00000532331 FOXD4L5Q5VV16 416 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-221ENST00000532331 FOXD4L4Q8WXT5 416 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-221ENST00000532331 FCHSD2O94868 740 aa13.72□□□□□ -0.21
PTPRK-221ENST00000532331 EXOSC9Q06265 439 aaKnown RBP13.72□□□□□ -0.21
PTPRK-221ENST00000532331 USHBP1Q8N6Y0 703 aa13.72□□□□□ -0.21
PTPRK-221ENST00000532331 UHRF1BP1Q6BDS2 1440 aa13.72□□□□□ -0.21
PTPRK-221ENST00000532331 CCDC57Q2TAC2 916 aa13.71□□□□□ -0.21
PTPRK-221ENST00000532331 MAP3K1Q13233 1512 aa13.71□□□□□ -0.21
PTPRK-221ENST00000532331 SURF6O75683 361 aaKnown RBP13.71□□□□□ -0.21
PTPRK-221ENST00000532331 AMER1Q5JTC6 1135 aaPredicted RBP13.71□□□□□ -0.21
PTPRK-221ENST00000532331 CCDC158Q5M9N0 1113 aa13.71□□□□□ -0.21
PTPRK-221ENST00000532331 C14orf93Q9H972 538 aaKnown RBP13.71□□□□□ -0.21
PTPRK-221ENST00000532331 TTC39AQ5SRH9 613 aa13.71□□□□□ -0.22
PTPRK-221ENST00000532331 RALYLQ86SE5 291 aaKnown RBP13.71□□□□□ -0.22
PTPRK-221ENST00000532331 ANO8Q9HCE9 1232 aaPredicted RBP13.71□□□□□ -0.22
PTPRK-221ENST00000532331 RIMS2Q9UQ26 1411 aa13.71□□□□□ -0.22
PTPRK-221ENST00000532331 KIAA0556O60303 1618 aa13.7□□□□□ -0.22
PTPRK-221ENST00000532331 CREBRFQ8IUR6 639 aa13.7□□□□□ -0.22
PTPRK-221ENST00000532331 NUP153P49790 1475 aaKnown RBP13.7□□□□□ -0.22
PTPRK-221ENST00000532331 AK7Q96M32 723 aa13.7□□□□□ -0.22
PTPRK-221ENST00000532331 UGGT2Q9NYU1 1516 aa13.7□□□□□ -0.22
PTPRK-221ENST00000532331 SYCP2Q9BX26 1530 aa13.7□□□□□ -0.22
PTPRK-221ENST00000532331 DUOX2Q9NRD8 1548 aa13.7□□□□□ -0.22
PTPRK-221ENST00000532331 ERC1Q8IUD2 1116 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms