RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 NOL8Q76FK4 1167 aaKnown RBP9.86□□□□□ -0.83
CTNND1-230ENST00000532245 PTPRKQ15262 1439 aa9.86□□□□□ -0.83
CTNND1-230ENST00000532245 GOLGA6L4A6NEF3 574 aa9.86□□□□□ -0.83
CTNND1-230ENST00000532245 UBTFL1P0CB47 393 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-230ENST00000532245 TWISTNBQ3B726 338 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-230ENST00000532245 APPP05067 770 aa9.86□□□□□ -0.83
CTNND1-230ENST00000532245 EXOSC9Q06265 439 aaKnown RBP9.86□□□□□ -0.83
CTNND1-230ENST00000532245 PNISRQ8TF01 805 aaKnown RBP9.86□□□□□ -0.83
CTNND1-230ENST00000532245 DDX19BQ9UMR2 479 aa9.86□□□□□ -0.83
CTNND1-230ENST00000532245 WDR97A6NE52 1622 aa9.85□□□□□ -0.83
CTNND1-230ENST00000532245 BRD4O60885 1362 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-230ENST00000532245 AMOTL1Q8IY63 956 aa9.85□□□□□ -0.83
CTNND1-230ENST00000532245 ZBED9Q6R2W3 1325 aa9.85□□□□□ -0.83
CTNND1-230ENST00000532245 KIF16BQ96L93 1317 aa9.85□□□□□ -0.83
CTNND1-230ENST00000532245 CRBNQ96SW2 442 aa9.85□□□□□ -0.83
CTNND1-230ENST00000532245 MIS18AQ9NYP9 233 aa9.85□□□□□ -0.83
CTNND1-230ENST00000532245 GNAT3A8MTJ3 354 aa9.85□□□□□ -0.83
CTNND1-230ENST00000532245 SLC4A2P04920 1241 aa9.85□□□□□ -0.83
CTNND1-230ENST00000532245 CCDC27Q2M243 656 aa9.84□□□□□ -0.83
CTNND1-230ENST00000532245 NCBP3Q53F19 620 aaKnown RBP9.84□□□□□ -0.83
CTNND1-230ENST00000532245 FYB1O15117 783 aa9.83□□□□□ -0.84
CTNND1-230ENST00000532245 STARD3NLO95772 234 aa9.83□□□□□ -0.84
CTNND1-230ENST00000532245 RRP1P56182 461 aaKnown RBP9.83□□□□□ -0.84
CTNND1-230ENST00000532245 VPS53Q5VIR6 699 aa9.83□□□□□ -0.84
CTNND1-230ENST00000532245 MCM10Q7L590 875 aa9.83□□□□□ -0.84
CTNND1-230ENST00000532245 FBLN1P23142 703 aa9.83□□□□□ -0.84
CTNND1-230ENST00000532245 SAMD1Q6SPF0 538 aaPredicted RBP9.83□□□□□ -0.84
CTNND1-230ENST00000532245 ANKRD24Q8TF21 1146 aa9.83□□□□□ -0.84
CTNND1-230ENST00000532245 BCL11BQ9C0K0 894 aaPredicted RBP9.83□□□□□ -0.84
CTNND1-230ENST00000532245 CHD1O14646 1710 aa9.83□□□□□ -0.84
CTNND1-230ENST00000532245 EXOC6Q8TAG9 804 aa9.83□□□□□ -0.84
CTNND1-230ENST00000532245 DIAPH3Q9NSV4 1193 aa9.83□□□□□ -0.84
CTNND1-230ENST00000532245 SCAF11Q99590 1463 aaKnown RBP9.82□□□□□ -0.84
CTNND1-230ENST00000532245 FCHSD2O94868 740 aa9.82□□□□□ -0.84
CTNND1-230ENST00000532245 DCTN1Q14203 1278 aa9.82□□□□□ -0.84
CTNND1-230ENST00000532245 LRRFIP1Q32MZ4 808 aaKnown RBP9.82□□□□□ -0.84
CTNND1-230ENST00000532245 CDCA7LQ96GN5 454 aa9.82□□□□□ -0.84
CTNND1-230ENST00000532245 CTDP1Q9Y5B0 961 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-230ENST00000532245 ZPR1O75312 459 aa9.82□□□□□ -0.84
CTNND1-230ENST00000532245 LRRC59Q96AG4 307 aaKnown RBP9.82□□□□□ -0.84
CTNND1-230ENST00000532245 THUMPD2Q9BTF0 503 aaKnown RBP9.82□□□□□ -0.84
CTNND1-230ENST00000532245 CNNM1Q9NRU3 951 aa9.82□□□□□ -0.84
CTNND1-230ENST00000532245 YEATS2Q9ULM3 1422 aa9.82□□□□□ -0.84
CTNND1-230ENST00000532245 PANK1Q8TE04 598 aa9.82□□□□□ -0.84
CTNND1-230ENST00000532245 ZFYVE16Q7Z3T8 1539 aa9.81□□□□□ -0.84
CTNND1-230ENST00000532245 ATP7AQ04656 1500 aa9.81□□□□□ -0.84
CTNND1-230ENST00000532245 PLCB2Q00722 1185 aa9.81□□□□□ -0.84
CTNND1-230ENST00000532245 AMER1Q5JTC6 1135 aaPredicted RBP9.81□□□□□ -0.84
CTNND1-230ENST00000532245 NEO1Q92859 1461 aa9.81□□□□□ -0.84
CTNND1-230ENST00000532245 TSPOAP1O95153 1857 aa9.81□□□□□ -0.84
CTNND1-230ENST00000532245 ACSBG1Q96GR2 724 aa9.81□□□□□ -0.84
CTNND1-230ENST00000532245 AMOTQ4VCS5 1084 aa9.81□□□□□ -0.84
CTNND1-230ENST00000532245 CCDC85AQ96PX6 553 aaPredicted RBP9.8□□□□□ -0.84
CTNND1-230ENST00000532245 PHF14O94880 888 aa9.8□□□□□ -0.84
CTNND1-230ENST00000532245 TBX22Q9Y458 520 aa9.8□□□□□ -0.84
CTNND1-230ENST00000532245 HSP90AB4PQ58FF6 505 aa9.8□□□□□ -0.84
CTNND1-230ENST00000532245 NFE2L2Q16236 605 aa9.79□□□□□ -0.84
CTNND1-230ENST00000532245 CWC22Q9HCG8 908 aaKnown RBP9.79□□□□□ -0.84
CTNND1-230ENST00000532245 PPIP5K1Q6PFW1 1433 aa9.79□□□□□ -0.84
CTNND1-230ENST00000532245 WASHC4Q2M389 1173 aa9.79□□□□□ -0.84
CTNND1-230ENST00000532245 TTC21BQ7Z4L5 1316 aa9.79□□□□□ -0.84
CTNND1-230ENST00000532245 RPRD2Q5VT52 1461 aaKnown RBP9.79□□□□□ -0.84
CTNND1-230ENST00000532245 DHX16O60231 1041 aaKnown RBP9.78□□□□□ -0.84
CTNND1-230ENST00000532245 SURF6O75683 361 aaKnown RBP9.78□□□□□ -0.84
CTNND1-230ENST00000532245 MARCH6O60337 910 aa9.78□□□□□ -0.84
CTNND1-230ENST00000532245 HMGB2P26583 209 aaKnown RBP9.78□□□□□ -0.84
CTNND1-230ENST00000532245 MPHOSPH8Q99549 860 aa9.78□□□□□ -0.84
CTNND1-230ENST00000532245 SIL1Q9H173 461 aa9.78□□□□□ -0.84
CTNND1-230ENST00000532245 C11orf95C9JLR9 678 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-230ENST00000532245 GNAI3P08754 354 aa9.78□□□□□ -0.84
CTNND1-230ENST00000532245 DDX17Q92841 729 aaKnown RBP9.78□□□□□ -0.84
CTNND1-230ENST00000532245 AK7Q96M32 723 aa9.78□□□□□ -0.84
CTNND1-230ENST00000532245 ORAI2Q96SN7 254 aa9.78□□□□□ -0.84
CTNND1-230ENST00000532245 C1orf115Q9H7X2 142 aa9.78□□□□□ -0.84
CTNND1-230ENST00000532245 NOB1Q9ULX3 412 aaKnown RBP9.77□□□□□ -0.84
CTNND1-230ENST00000532245 TMPOP42166 694 aaKnown RBP9.77□□□□□ -0.85
CTNND1-230ENST00000532245 IFNL2Q8IZJ0 200 aa9.77□□□□□ -0.85
CTNND1-230ENST00000532245 ZNF219Q9P2Y4 722 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-230ENST00000532245 DDB1Q16531 1140 aa9.77□□□□□ -0.85
CTNND1-230ENST00000532245 ZRANB1Q9UGI0 708 aa9.77□□□□□ -0.85
CTNND1-230ENST00000532245 DISP3Q9P2K9 1392 aa9.77□□□□□ -0.85
CTNND1-230ENST00000532245 SRCIN1Q9C0H9 1055 aa9.77□□□□□ -0.85
CTNND1-230ENST00000532245 FOXD4L1Q9NU39 408 aa9.77□□□□□ -0.85
CTNND1-230ENST00000532245 RASSF8Q8NHQ8 419 aa9.76□□□□□ -0.85
CTNND1-230ENST00000532245 ZNF652Q9Y2D9 606 aa9.76□□□□□ -0.85
CTNND1-230ENST00000532245 HSP90AB2PQ58FF8 381 aa9.76□□□□□ -0.85
CTNND1-230ENST00000532245 ERICH6BQ5W0A0 696 aa9.76□□□□□ -0.85
CTNND1-230ENST00000532245 DNAJC2Q99543 621 aaKnown RBP9.76□□□□□ -0.85
CTNND1-230ENST00000532245 BTG4Q9NY30 223 aa9.76□□□□□ -0.85
CTNND1-230ENST00000532245 TAF7Q15545 349 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-230ENST00000532245 CCDC57Q2TAC2 916 aa9.76□□□□□ -0.85
CTNND1-230ENST00000532245 SYNE3Q6ZMZ3 975 aa9.76□□□□□ -0.85
CTNND1-230ENST00000532245 RUFY2Q8WXA3 655 aa9.76□□□□□ -0.85
CTNND1-230ENST00000532245 LNPKQ9C0E8 428 aa9.76□□□□□ -0.85
CTNND1-230ENST00000532245 RBM5P52756 815 aaKnown RBP eCLIP9.76□□□□□ -0.85
CTNND1-230ENST00000532245 CENPQQ7L2Z9 268 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-230ENST00000532245 ZCRB1Q8TBF4 217 aaKnown RBP9.76□□□□□ -0.85
CTNND1-230ENST00000532245 SLAIN2Q9P270 581 aa9.76□□□□□ -0.85
CTNND1-230ENST00000532245 TCOF1Q13428 1488 aaKnown RBP9.75□□□□□ -0.85
CTNND1-230ENST00000532245 TTC21AQ8NDW8 1320 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms