RNA–Protein interactions for RNA: ENST00000532145.1

LRRK1-209, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-209ENST00000532145 SAFB2Q14151 953 aaKnown RBP eCLIP17.98■□□□□ 0.47
LRRK1-209ENST00000532145 GGNBP2Q9H3C7 697 aa17.98■□□□□ 0.47
LRRK1-209ENST00000532145 SMC4Q9NTJ3 1288 aa17.98■□□□□ 0.47
LRRK1-209ENST00000532145 CD163L1Q9NR16 1453 aa17.97■□□□□ 0.47
LRRK1-209ENST00000532145 U2SURPO15042 1029 aaKnown RBP17.97■□□□□ 0.47
LRRK1-209ENST00000532145 FYB1O15117 783 aa17.97■□□□□ 0.47
LRRK1-209ENST00000532145 TERF2IPQ9NYB0 399 aa17.96■□□□□ 0.47
LRRK1-209ENST00000532145 SSH1Q8WYL5 1049 aa17.96■□□□□ 0.47
LRRK1-209ENST00000532145 DDX19BQ9UMR2 479 aa17.96■□□□□ 0.47
LRRK1-209ENST00000532145 ANKRD26Q9UPS8 1709 aa17.96■□□□□ 0.47
LRRK1-209ENST00000532145 PNPLA6Q8IY17 1366 aa17.96■□□□□ 0.47
LRRK1-209ENST00000532145 ATF7IPQ6VMQ6 1270 aa17.96■□□□□ 0.46
LRRK1-209ENST00000532145 CLTCQ00610 1675 aaKnown RBP17.95■□□□□ 0.46
LRRK1-209ENST00000532145 STK26Q9P289 416 aa17.95■□□□□ 0.46
LRRK1-209ENST00000532145 TBC1D2Q9BYX2 928 aa17.95■□□□□ 0.46
LRRK1-209ENST00000532145 RTN4Q9NQC3 1192 aaKnown RBP17.95■□□□□ 0.46
LRRK1-209ENST00000532145 SLKQ9H2G2 1235 aaPredicted RBP17.94■□□□□ 0.46
LRRK1-209ENST00000532145 TMEM131LA2VDJ0 1609 aa17.93■□□□□ 0.46
LRRK1-209ENST00000532145 YTHDC2Q9H6S0 1430 aaKnown RBP17.92■□□□□ 0.46
LRRK1-209ENST00000532145 SMC5Q8IY18 1101 aa17.92■□□□□ 0.46
LRRK1-209ENST00000532145 PRAM1Q96QH2 718 aa17.92■□□□□ 0.46
LRRK1-209ENST00000532145 PNNQ9H307 717 aaKnown RBP17.92■□□□□ 0.46
LRRK1-209ENST00000532145 RIPK4P57078 832 aa17.91■□□□□ 0.46
LRRK1-209ENST00000532145 NOB1Q9ULX3 412 aaKnown RBP17.91■□□□□ 0.46
LRRK1-209ENST00000532145 DIAPH1O60610 1272 aaKnown RBP17.91■□□□□ 0.46
LRRK1-209ENST00000532145 ITPRIPQ8IWB1 547 aa17.91■□□□□ 0.46
LRRK1-209ENST00000532145 MINK1Q8N4C8 1332 aaPredicted RBP17.91■□□□□ 0.46
LRRK1-209ENST00000532145 OSCARQ8IYS5 282 aa17.91■□□□□ 0.46
LRRK1-209ENST00000532145 ZBTB40Q9NUA8 1239 aa17.91■□□□□ 0.46
LRRK1-209ENST00000532145 KIF16BQ96L93 1317 aa17.9■□□□□ 0.46
LRRK1-209ENST00000532145 RICTORQ6R327 1708 aa17.9■□□□□ 0.46
LRRK1-209ENST00000532145 PREX1Q8TCU6 1659 aa17.89■□□□□ 0.45
LRRK1-209ENST00000532145 MYO5BQ9ULV0 1848 aa17.89■□□□□ 0.45
LRRK1-209ENST00000532145 CDC42BPGQ6DT37 1551 aa17.89■□□□□ 0.45
LRRK1-209ENST00000532145 ARHGEF40Q8TER5 1519 aa17.89■□□□□ 0.45
LRRK1-209ENST00000532145 POGKQ9P215 609 aa17.89■□□□□ 0.45
LRRK1-209ENST00000532145 IPO8O15397 1037 aaKnown RBP17.88■□□□□ 0.45
LRRK1-209ENST00000532145 ALDH1L2Q3SY69 923 aa17.88■□□□□ 0.45
LRRK1-209ENST00000532145 HDGFL2Q7Z4V5 671 aaPredicted RBP17.88■□□□□ 0.45
LRRK1-209ENST00000532145 TMEM57Q8N5G2 664 aa17.88■□□□□ 0.45
LRRK1-209ENST00000532145 FCHSD2O94868 740 aa17.88■□□□□ 0.45
LRRK1-209ENST00000532145 C22orf23Q9BZE7 217 aa17.88■□□□□ 0.45
LRRK1-209ENST00000532145 YEATS2Q9ULM3 1422 aa17.87■□□□□ 0.45
LRRK1-209ENST00000532145 BRPF1P55201 1214 aaPredicted RBP17.86■□□□□ 0.45
LRRK1-209ENST00000532145 ZNF428Q96B54 188 aa17.86■□□□□ 0.45
LRRK1-209ENST00000532145 CDK19Q9BWU1 502 aa17.86■□□□□ 0.45
LRRK1-209ENST00000532145 PPIP5K1Q6PFW1 1433 aa17.85■□□□□ 0.45
LRRK1-209ENST00000532145 ALKQ9UM73 1620 aa17.85■□□□□ 0.45
LRRK1-209ENST00000532145 CABP1Q9NZU7 370 aa17.85■□□□□ 0.45
LRRK1-209ENST00000532145 LRRC7Q96NW7 1537 aa17.84■□□□□ 0.45
LRRK1-209ENST00000532145 FAM135BQ49AJ0 1406 aa17.84■□□□□ 0.45
LRRK1-209ENST00000532145 KIF20BQ96Q89 1820 aa17.83■□□□□ 0.45
LRRK1-209ENST00000532145 MFAP1P55081 439 aaKnown RBP17.83■□□□□ 0.45
LRRK1-209ENST00000532145 NUCB1Q02818 461 aa17.83■□□□□ 0.45
LRRK1-209ENST00000532145 RSPH6AQ9H0K4 717 aa17.83■□□□□ 0.45
LRRK1-209ENST00000532145 SENP3Q9H4L4 574 aaPredicted RBP17.83■□□□□ 0.44
LRRK1-209ENST00000532145 POLKQ9UBT6 870 aa17.81■□□□□ 0.44
LRRK1-209ENST00000532145 ATP7BP35670 1465 aa17.81■□□□□ 0.44
LRRK1-209ENST00000532145 PRKAR2BP31323 418 aa17.8■□□□□ 0.44
LRRK1-209ENST00000532145 DLC1Q96QB1 1528 aa17.8■□□□□ 0.44
LRRK1-209ENST00000532145 FBXO31Q5XUX0 539 aaPredicted RBP17.79■□□□□ 0.44
LRRK1-209ENST00000532145 CHMP5Q9NZZ3 219 aa17.79■□□□□ 0.44
LRRK1-209ENST00000532145 RBM25P49756 843 aaKnown RBP17.79■□□□□ 0.44
LRRK1-209ENST00000532145 ANO8Q9HCE9 1232 aaPredicted RBP17.79■□□□□ 0.44
LRRK1-209ENST00000532145 ARHGAP45Q92619 1136 aa17.79■□□□□ 0.44
LRRK1-209ENST00000532145 PIK3R4Q99570 1358 aa17.78■□□□□ 0.44
LRRK1-209ENST00000532145 MCM4P33991 863 aa17.78■□□□□ 0.44
LRRK1-209ENST00000532145 L1TD1Q5T7N2 865 aaKnown RBP17.78■□□□□ 0.44
LRRK1-209ENST00000532145 CHD1LQ86WJ1 897 aa17.78■□□□□ 0.44
LRRK1-209ENST00000532145 NFE2L2Q16236 605 aa17.78■□□□□ 0.44
LRRK1-209ENST00000532145 FAM43AQ8N2R8 423 aa17.77■□□□□ 0.44
LRRK1-209ENST00000532145 ZBTB7BO15156 539 aaPredicted RBP17.77■□□□□ 0.43
LRRK1-209ENST00000532145 VAMP4O75379 141 aa17.77■□□□□ 0.43
LRRK1-209ENST00000532145 CALD1Q05682 793 aaKnown RBP17.77■□□□□ 0.43
LRRK1-209ENST00000532145 CHMP4BQ9H444 224 aaKnown RBP17.77■□□□□ 0.43
LRRK1-209ENST00000532145 PTCH1Q13635 1447 aa17.76■□□□□ 0.43
LRRK1-209ENST00000532145 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
LRRK1-209ENST00000532145 PHACTR3Q96KR7 559 aa17.76■□□□□ 0.43
LRRK1-209ENST00000532145 BMP2KLQ5H9B9 411 aa17.76■□□□□ 0.43
LRRK1-209ENST00000532145 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.76■□□□□ 0.43
LRRK1-209ENST00000532145 LNPKQ9C0E8 428 aa17.76■□□□□ 0.43
LRRK1-209ENST00000532145 HSCBQ8IWL3 235 aa17.75■□□□□ 0.43
LRRK1-209ENST00000532145 MRPL50Q8N5N7 158 aaKnown RBP17.75■□□□□ 0.43
LRRK1-209ENST00000532145 SPRYD3Q8NCJ5 442 aa17.75■□□□□ 0.43
LRRK1-209ENST00000532145 SNX21Q969T3 373 aa17.75■□□□□ 0.43
LRRK1-209ENST00000532145 GCC1Q96CN9 775 aa17.75■□□□□ 0.43
LRRK1-209ENST00000532145 ZNF692Q9BU19 519 aaPredicted RBP17.75■□□□□ 0.43
LRRK1-209ENST00000532145 IFT57Q9NWB7 429 aa17.75■□□□□ 0.43
LRRK1-209ENST00000532145 FBLN1P23142 703 aa17.74■□□□□ 0.43
LRRK1-209ENST00000532145 ZNF853P0CG23 659 aa17.74■□□□□ 0.43
LRRK1-209ENST00000532145 DDIT3P35638 169 aa17.74■□□□□ 0.43
LRRK1-209ENST00000532145 GNAI1P63096 354 aa17.74■□□□□ 0.43
LRRK1-209ENST00000532145 STAG3Q9UJ98 1225 aa17.74■□□□□ 0.43
LRRK1-209ENST00000532145 CPSF1Q10570 1443 aaKnown RBP17.73■□□□□ 0.43
LRRK1-209ENST00000532145 IL13P35225 146 aa17.73■□□□□ 0.43
LRRK1-209ENST00000532145 FSD2A1L4K1 749 aa17.73■□□□□ 0.43
LRRK1-209ENST00000532145 WAPLQ7Z5K2 1190 aa17.73■□□□□ 0.43
LRRK1-209ENST00000532145 EDC4Q6P2E9 1401 aaKnown RBP17.72■□□□□ 0.43
LRRK1-209ENST00000532145 A2ML1A8K2U0 1454 aa17.72■□□□□ 0.43
LRRK1-209ENST00000532145 CDK12Q9NYV4 1490 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms