RNA–Protein interactions for RNA: ENST00000532014.1

TRIM53AP-201, Transcript of tripartite motif containing 53A, pseudogene, humanhuman

BASIC

Gene TRIM53AP, Length 1,544 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53AP-201ENST00000532014 TMC1Q8TDI8 760 aa12.92□□□□□ -0.34
TRIM53AP-201ENST00000532014 CRYBG1Q9Y4K1 1723 aa12.91□□□□□ -0.34
TRIM53AP-201ENST00000532014 FBXO41Q8TF61 875 aa12.91□□□□□ -0.34
TRIM53AP-201ENST00000532014 POLR3GLQ9BT43 218 aa12.91□□□□□ -0.34
TRIM53AP-201ENST00000532014 ANKRD36BQ8N2N9 1353 aa12.91□□□□□ -0.34
TRIM53AP-201ENST00000532014 NPHP3Q7Z494 1330 aa12.9□□□□□ -0.34
TRIM53AP-201ENST00000532014 NGDNQ8NEJ9 315 aaKnown RBP12.89□□□□□ -0.35
TRIM53AP-201ENST00000532014 CARD14Q9BXL6 1004 aa12.89□□□□□ -0.35
TRIM53AP-201ENST00000532014 HSPA1LP34931 641 aa12.88□□□□□ -0.35
TRIM53AP-201ENST00000532014 USP54Q70EL1 1684 aa12.88□□□□□ -0.35
TRIM53AP-201ENST00000532014 KIF20BQ96Q89 1820 aa12.88□□□□□ -0.35
TRIM53AP-201ENST00000532014 ABCA3Q99758 1704 aa12.88□□□□□ -0.35
TRIM53AP-201ENST00000532014 KTN1Q86UP2 1357 aaKnown RBP12.88□□□□□ -0.35
TRIM53AP-201ENST00000532014 COL22A1Q8NFW1 1626 aaPredicted RBP12.88□□□□□ -0.35
TRIM53AP-201ENST00000532014 KRT28Q7Z3Y7 464 aa12.88□□□□□ -0.35
TRIM53AP-201ENST00000532014 SHPRHQ149N8 1683 aa12.87□□□□□ -0.35
TRIM53AP-201ENST00000532014 ZNF316A6NFI3 1004 aaPredicted RBP12.87□□□□□ -0.35
TRIM53AP-201ENST00000532014 PSME1Q06323 249 aa12.87□□□□□ -0.35
TRIM53AP-201ENST00000532014 PANK3Q9H999 370 aa12.87□□□□□ -0.35
TRIM53AP-201ENST00000532014 TNS3Q68CZ2 1445 aa12.87□□□□□ -0.35
TRIM53AP-201ENST00000532014 EDC4Q6P2E9 1401 aaKnown RBP12.87□□□□□ -0.35
TRIM53AP-201ENST00000532014 SBNO1A3KN83 1393 aa12.86□□□□□ -0.35
TRIM53AP-201ENST00000532014 NSD3Q9BZ95 1437 aa12.86□□□□□ -0.35
TRIM53AP-201ENST00000532014 SPATA31A3Q5VYP0 1347 aa12.86□□□□□ -0.35
TRIM53AP-201ENST00000532014 MED1Q15648 1581 aaPredicted RBP12.85□□□□□ -0.35
TRIM53AP-201ENST00000532014 PHRF1Q9P1Y6 1649 aaKnown RBP12.85□□□□□ -0.35
TRIM53AP-201ENST00000532014 PER1O15534 1290 aaPredicted RBP12.85□□□□□ -0.35
TRIM53AP-201ENST00000532014 ZNF692Q9BU19 519 aaPredicted RBP12.85□□□□□ -0.35
TRIM53AP-201ENST00000532014 TERF2IPQ9NYB0 399 aa12.85□□□□□ -0.35
TRIM53AP-201ENST00000532014 TTC21BQ7Z4L5 1316 aa12.85□□□□□ -0.35
TRIM53AP-201ENST00000532014 ANKRD26Q9UPS8 1709 aa12.84□□□□□ -0.35
TRIM53AP-201ENST00000532014 PNPLA6Q8IY17 1366 aa12.84□□□□□ -0.35
TRIM53AP-201ENST00000532014 HDGFL2Q7Z4V5 671 aaPredicted RBP12.83□□□□□ -0.35
TRIM53AP-201ENST00000532014 BRD4O60885 1362 aaPredicted RBP12.83□□□□□ -0.36
TRIM53AP-201ENST00000532014 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRIM53AP-201ENST00000532014 ZRANB1Q9UGI0 708 aa12.83□□□□□ -0.36
TRIM53AP-201ENST00000532014 PAK3O75914 559 aaPredicted RBP12.82□□□□□ -0.36
TRIM53AP-201ENST00000532014 OVOS2A0A0J9YW53 1432 aa12.81□□□□□ -0.36
TRIM53AP-201ENST00000532014 OVOS2Q6IE36 1432 aa12.81□□□□□ -0.36
TRIM53AP-201ENST00000532014 DDX10Q13206 875 aaKnown RBP12.81□□□□□ -0.36
TRIM53AP-201ENST00000532014 ILDR1Q86SU0 546 aaPredicted RBP12.81□□□□□ -0.36
TRIM53AP-201ENST00000532014 NME9Q86XW9 330 aa12.81□□□□□ -0.36
TRIM53AP-201ENST00000532014 LRRC59Q96AG4 307 aaKnown RBP12.81□□□□□ -0.36
TRIM53AP-201ENST00000532014 TTC21AQ8NDW8 1320 aa12.81□□□□□ -0.36
TRIM53AP-201ENST00000532014 SLIT3O75094 1523 aa12.81□□□□□ -0.36
TRIM53AP-201ENST00000532014 FYB1O15117 783 aa12.8□□□□□ -0.36
TRIM53AP-201ENST00000532014 AMER1Q5JTC6 1135 aaPredicted RBP12.8□□□□□ -0.36
TRIM53AP-201ENST00000532014 NUTM2GQ5VZR2 741 aa12.8□□□□□ -0.36
TRIM53AP-201ENST00000532014 ARHGEF10O15013 1369 aa12.79□□□□□ -0.36
TRIM53AP-201ENST00000532014 LRP6O75581 1613 aa12.79□□□□□ -0.36
TRIM53AP-201ENST00000532014 NFAT5O94916 1531 aa12.79□□□□□ -0.36
TRIM53AP-201ENST00000532014 USP31Q70CQ4 1352 aa12.79□□□□□ -0.36
TRIM53AP-201ENST00000532014 ABTB2Q8N961 1025 aa12.79□□□□□ -0.36
TRIM53AP-201ENST00000532014 RNF216Q9NWF9 866 aaPredicted RBP12.79□□□□□ -0.36
TRIM53AP-201ENST00000532014 JCADQ9P266 1359 aa12.79□□□□□ -0.36
TRIM53AP-201ENST00000532014 USP19O94966 1318 aa12.78□□□□□ -0.36
TRIM53AP-201ENST00000532014 CABLES1Q8TDN4 633 aa12.78□□□□□ -0.36
TRIM53AP-201ENST00000532014 LTN1O94822 1766 aa12.77□□□□□ -0.36
TRIM53AP-201ENST00000532014 LMOD2Q6P5Q4 547 aa12.77□□□□□ -0.37
TRIM53AP-201ENST00000532014 GGNBP2Q9H3C7 697 aa12.77□□□□□ -0.37
TRIM53AP-201ENST00000532014 CGNL1Q0VF96 1302 aa12.76□□□□□ -0.37
TRIM53AP-201ENST00000532014 MAP2P11137 1827 aaKnown RBP12.75□□□□□ -0.37
TRIM53AP-201ENST00000532014 FBLN1P23142 703 aa12.75□□□□□ -0.37
TRIM53AP-201ENST00000532014 NLRP6P59044 892 aa12.75□□□□□ -0.37
TRIM53AP-201ENST00000532014 KNSTRNQ9Y448 316 aa12.75□□□□□ -0.37
TRIM53AP-201ENST00000532014 NPC1L1Q9UHC9 1359 aa12.75□□□□□ -0.37
TRIM53AP-201ENST00000532014 COL18A1P39060 1754 aa12.74□□□□□ -0.37
TRIM53AP-201ENST00000532014 PEAK1Q9H792 1746 aa12.74□□□□□ -0.37
TRIM53AP-201ENST00000532014 PLEKHG5O94827 1062 aa12.74□□□□□ -0.37
TRIM53AP-201ENST00000532014 RGPD5Q99666 1765 aa12.74□□□□□ -0.37
TRIM53AP-201ENST00000532014 LMO7Q8WWI1 1683 aa12.73□□□□□ -0.37
TRIM53AP-201ENST00000532014 NSD2O96028 1365 aa12.73□□□□□ -0.37
TRIM53AP-201ENST00000532014 PLCH1Q4KWH8 1693 aa12.73□□□□□ -0.37
TRIM53AP-201ENST00000532014 GCP02774 474 aa12.72□□□□□ -0.37
TRIM53AP-201ENST00000532014 NLRP13Q86W25 1043 aa12.72□□□□□ -0.37
TRIM53AP-201ENST00000532014 SPATA31A6Q5VVP1 1343 aa12.72□□□□□ -0.37
TRIM53AP-201ENST00000532014 CC2D1BQ5T0F9 858 aaKnown RBP12.72□□□□□ -0.37
TRIM53AP-201ENST00000532014 COG3Q96JB2 828 aa12.71□□□□□ -0.38
TRIM53AP-201ENST00000532014 EP400Q96L91 3159 aa12.7□□□□□ -0.38
TRIM53AP-201ENST00000532014 SOX12O15370 315 aa12.7□□□□□ -0.38
TRIM53AP-201ENST00000532014 PPP4R3CPQ6ZMV5 832 aa12.7□□□□□ -0.38
TRIM53AP-201ENST00000532014 NRAPQ86VF7 1730 aa12.7□□□□□ -0.38
TRIM53AP-201ENST00000532014 CPDO75976 1380 aa12.7□□□□□ -0.38
TRIM53AP-201ENST00000532014 PARD3Q8TEW0 1356 aa12.7□□□□□ -0.38
TRIM53AP-201ENST00000532014 KIAA0232Q92628 1395 aa12.7□□□□□ -0.38
TRIM53AP-201ENST00000532014 COL14A1Q05707 1796 aaKnown RBP12.7□□□□□ -0.38
TRIM53AP-201ENST00000532014 NUTM2BA6NNL0 878 aaPredicted RBP12.69□□□□□ -0.38
TRIM53AP-201ENST00000532014 NUTM2EB1AL46 878 aaPredicted RBP12.69□□□□□ -0.38
TRIM53AP-201ENST00000532014 CNGB1Q14028 1251 aaPredicted RBP12.69□□□□□ -0.38
TRIM53AP-201ENST00000532014 NUTM2AQ8IVF1 878 aaPredicted RBP12.69□□□□□ -0.38
TRIM53AP-201ENST00000532014 SMG6Q86US8 1419 aaKnown RBP12.69□□□□□ -0.38
TRIM53AP-201ENST00000532014 AATKQ6ZMQ8 1374 aa12.68□□□□□ -0.38
TRIM53AP-201ENST00000532014 ZC3H6P61129 1189 aaKnown RBP12.68□□□□□ -0.38
TRIM53AP-201ENST00000532014 ARHGEF25Q86VW2 580 aa12.68□□□□□ -0.38
TRIM53AP-201ENST00000532014 NWD2Q9ULI1 1742 aa12.68□□□□□ -0.38
TRIM53AP-201ENST00000532014 CAMTA1Q9Y6Y1 1673 aa12.68□□□□□ -0.38
TRIM53AP-201ENST00000532014 FAM83GA6ND36 823 aa12.67□□□□□ -0.38
TRIM53AP-201ENST00000532014 ADAMTS2O95450 1211 aa12.67□□□□□ -0.38
TRIM53AP-201ENST00000532014 TNNT2P45379 298 aaPredicted RBP12.67□□□□□ -0.38
TRIM53AP-201ENST00000532014 RRS1Q15050 365 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms