RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 FAM69CQ0P6D2 419 aa21.67■■□□□ 1.06
VPS26B-206ENST00000531741 FRAT1Q92837 279 aaPredicted RBP21.67■■□□□ 1.06
VPS26B-206ENST00000531741 IL16Q14005 1332 aa21.67■■□□□ 1.06
VPS26B-206ENST00000531741 ATP7BP35670 1465 aa21.67■■□□□ 1.06
VPS26B-206ENST00000531741 CDK19Q9BWU1 502 aa21.66■■□□□ 1.06
VPS26B-206ENST00000531741 RIMBP3CA6NJZ7 1639 aa21.66■■□□□ 1.06
VPS26B-206ENST00000531741 RIMBP3BA6NNM3 1639 aa21.66■■□□□ 1.06
VPS26B-206ENST00000531741 RIMBP3Q9UFD9 1639 aa21.66■■□□□ 1.06
VPS26B-206ENST00000531741 TMPOP42166 694 aaKnown RBP21.65■■□□□ 1.06
VPS26B-206ENST00000531741 PNNQ9H307 717 aaKnown RBP21.65■■□□□ 1.06
VPS26B-206ENST00000531741 STAG3Q9UJ98 1225 aa21.64■■□□□ 1.05
VPS26B-206ENST00000531741 RLBP1P12271 317 aa21.64■■□□□ 1.05
VPS26B-206ENST00000531741 RIMS2Q9UQ26 1411 aa21.63■■□□□ 1.05
VPS26B-206ENST00000531741 TRIM35Q9UPQ4 493 aa21.62■■□□□ 1.05
VPS26B-206ENST00000531741 U2SURPO15042 1029 aaKnown RBP21.61■■□□□ 1.05
VPS26B-206ENST00000531741 TSPOAP1O95153 1857 aa21.61■■□□□ 1.05
VPS26B-206ENST00000531741 DIAPH1O60610 1272 aaKnown RBP21.6■■□□□ 1.05
VPS26B-206ENST00000531741 BCL11AQ9H165 835 aa21.6■■□□□ 1.05
VPS26B-206ENST00000531741 CABP1Q9NZU7 370 aa21.6■■□□□ 1.05
VPS26B-206ENST00000531741 ZKSCAN2Q63HK3 967 aa21.6■■□□□ 1.05
VPS26B-206ENST00000531741 MVPQ14764 893 aaKnown RBP21.59■■□□□ 1.05
VPS26B-206ENST00000531741 PCDHB15Q9Y5E8 787 aa21.59■■□□□ 1.05
VPS26B-206ENST00000531741 NRXN3Q9Y4C0 1643 aa21.58■■□□□ 1.05
VPS26B-206ENST00000531741 BCL2L13Q9BXK5 485 aa21.57■■□□□ 1.04
VPS26B-206ENST00000531741 RWDD1Q9H446 243 aaPredicted RBP21.57■■□□□ 1.04
VPS26B-206ENST00000531741 LAS1LQ9Y4W2 734 aaKnown RBP21.57■■□□□ 1.04
VPS26B-206ENST00000531741 FCHSD2O94868 740 aa21.57■■□□□ 1.04
VPS26B-206ENST00000531741 TNNQ9UQP3 1299 aa21.57■■□□□ 1.04
VPS26B-206ENST00000531741 DZIP1LQ8IYY4 767 aaKnown RBP21.56■■□□□ 1.04
VPS26B-206ENST00000531741 NEFMP07197 916 aa21.56■■□□□ 1.04
VPS26B-206ENST00000531741 CPSF1Q10570 1443 aaKnown RBP21.55■■□□□ 1.04
VPS26B-206ENST00000531741 KNDC1Q76NI1 1749 aa21.55■■□□□ 1.04
VPS26B-206ENST00000531741 EXOSC9Q06265 439 aaKnown RBP21.55■■□□□ 1.04
VPS26B-206ENST00000531741 TSR2Q969E8 191 aaKnown RBP21.55■■□□□ 1.04
VPS26B-206ENST00000531741 SENP3Q9H4L4 574 aaPredicted RBP21.55■■□□□ 1.04
VPS26B-206ENST00000531741 DAXXQ9UER7 740 aaPredicted RBP21.55■■□□□ 1.04
VPS26B-206ENST00000531741 LRRC7Q96NW7 1537 aa21.55■■□□□ 1.04
VPS26B-206ENST00000531741 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.54■■□□□ 1.04
VPS26B-206ENST00000531741 FAM135BQ49AJ0 1406 aa21.54■■□□□ 1.04
VPS26B-206ENST00000531741 EDC4Q6P2E9 1401 aaKnown RBP21.54■■□□□ 1.04
VPS26B-206ENST00000531741 RIPK4P57078 832 aa21.53■■□□□ 1.04
VPS26B-206ENST00000531741 FTSJ3Q8IY81 847 aaKnown RBP21.52■■□□□ 1.04
VPS26B-206ENST00000531741 SIRT1Q96EB6 747 aa21.52■■□□□ 1.04
VPS26B-206ENST00000531741 SMC4Q9NTJ3 1288 aa21.52■■□□□ 1.04
VPS26B-206ENST00000531741 TECPR2O15040 1411 aa21.52■■□□□ 1.04
VPS26B-206ENST00000531741 USP19O94966 1318 aa21.52■■□□□ 1.04
VPS26B-206ENST00000531741 PPIP5K1Q6PFW1 1433 aa21.52■■□□□ 1.04
VPS26B-206ENST00000531741 WAPLQ7Z5K2 1190 aa21.52■■□□□ 1.04
VPS26B-206ENST00000531741 POLKQ9UBT6 870 aa21.51■■□□□ 1.03
VPS26B-206ENST00000531741 SSH1Q8WYL5 1049 aa21.51■■□□□ 1.03
VPS26B-206ENST00000531741 TRIM27P14373 513 aa21.5■■□□□ 1.03
VPS26B-206ENST00000531741 ATF7IPQ6VMQ6 1270 aa21.5■■□□□ 1.03
VPS26B-206ENST00000531741 RSPH6AQ9H0K4 717 aa21.5■■□□□ 1.03
VPS26B-206ENST00000531741 MAP2P11137 1827 aaKnown RBP21.5■■□□□ 1.03
VPS26B-206ENST00000531741 AATKQ6ZMQ8 1374 aa21.5■■□□□ 1.03
VPS26B-206ENST00000531741 WASLO00401 505 aaPredicted RBP21.49■■□□□ 1.03
VPS26B-206ENST00000531741 ZNF428Q96B54 188 aa21.49■■□□□ 1.03
VPS26B-206ENST00000531741 DDX19BQ9UMR2 479 aa21.49■■□□□ 1.03
VPS26B-206ENST00000531741 PDZRN3Q9UPQ7 1066 aa21.49■■□□□ 1.03
VPS26B-206ENST00000531741 CDK12Q9NYV4 1490 aaPredicted RBP21.49■■□□□ 1.03
VPS26B-206ENST00000531741 ALDH1L2Q3SY69 923 aa21.49■■□□□ 1.03
VPS26B-206ENST00000531741 KIF16BQ96L93 1317 aa21.49■■□□□ 1.03
VPS26B-206ENST00000531741 MON2Q7Z3U7 1717 aa21.48■■□□□ 1.03
VPS26B-206ENST00000531741 HDAC1Q13547 482 aaPredicted RBP21.48■■□□□ 1.03
VPS26B-206ENST00000531741 CPS1P31327 1500 aa21.48■■□□□ 1.03
VPS26B-206ENST00000531741 BRPF1P55201 1214 aaPredicted RBP21.48■■□□□ 1.03
VPS26B-206ENST00000531741 METP08581 1390 aa21.46■■□□□ 1.03
VPS26B-206ENST00000531741 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.46■■□□□ 1.03
VPS26B-206ENST00000531741 IPO8O15397 1037 aaKnown RBP21.46■■□□□ 1.03
VPS26B-206ENST00000531741 HDGFP51858 240 aaKnown RBP21.46■■□□□ 1.03
VPS26B-206ENST00000531741 SLC4A3P48751 1232 aa21.45■■□□□ 1.02
VPS26B-206ENST00000531741 PRKAR2BP31323 418 aa21.44■■□□□ 1.02
VPS26B-206ENST00000531741 AKAP12Q02952 1782 aa21.44■■□□□ 1.02
VPS26B-206ENST00000531741 CALD1Q05682 793 aaKnown RBP21.44■■□□□ 1.02
VPS26B-206ENST00000531741 NOB1Q9ULX3 412 aaKnown RBP21.44■■□□□ 1.02
VPS26B-206ENST00000531741 NFE2L2Q16236 605 aa21.43■■□□□ 1.02
VPS26B-206ENST00000531741 SEC24BO95487 1268 aa21.43■■□□□ 1.02
VPS26B-206ENST00000531741 NFKBIBQ15653 356 aa21.42■■□□□ 1.02
VPS26B-206ENST00000531741 C3P01024 1663 aa21.42■■□□□ 1.02
VPS26B-206ENST00000531741 KIF13AQ9H1H9 1805 aa21.42■■□□□ 1.02
VPS26B-206ENST00000531741 IL13P35225 146 aa21.41■■□□□ 1.02
VPS26B-206ENST00000531741 MLECQ14165 292 aa21.41■■□□□ 1.02
VPS26B-206ENST00000531741 ITPRIPQ8IWB1 547 aa21.41■■□□□ 1.02
VPS26B-206ENST00000531741 CCDC61Q9Y6R9 512 aa21.41■■□□□ 1.02
VPS26B-206ENST00000531741 ITSN1Q15811 1721 aa21.4■■□□□ 1.02
VPS26B-206ENST00000531741 NUDT16Q96DE0 195 aaKnown RBP21.4■■□□□ 1.02
VPS26B-206ENST00000531741 ZBTB40Q9NUA8 1239 aa21.4■■□□□ 1.02
VPS26B-206ENST00000531741 SMC5Q8IY18 1101 aa21.4■■□□□ 1.02
VPS26B-206ENST00000531741 UPF2Q9HAU5 1272 aaKnown RBP21.4■■□□□ 1.02
VPS26B-206ENST00000531741 TNRQ92752 1358 aa21.38■■□□□ 1.01
VPS26B-206ENST00000531741 BECN1Q14457 450 aa21.38■■□□□ 1.01
VPS26B-206ENST00000531741 TMEM57Q8N5G2 664 aa21.38■■□□□ 1.01
VPS26B-206ENST00000531741 TBC1D32Q96NH3 1257 aa21.38■■□□□ 1.01
VPS26B-206ENST00000531741 ESF1Q9H501 851 aaKnown RBP21.38■■□□□ 1.01
VPS26B-206ENST00000531741 UBR1Q8IWV7 1749 aa21.38■■□□□ 1.01
VPS26B-206ENST00000531741 NME9Q86XW9 330 aa21.38■■□□□ 1.01
VPS26B-206ENST00000531741 ZNF692Q9BU19 519 aaPredicted RBP21.38■■□□□ 1.01
VPS26B-206ENST00000531741 IFT57Q9NWB7 429 aa21.38■■□□□ 1.01
VPS26B-206ENST00000531741 TXNDC2Q86VQ3 553 aa21.37■■□□□ 1.01
VPS26B-206ENST00000531741 ARHGAP45Q92619 1136 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms