RNA–Protein interactions for RNA: ENST00000531590.1

LRFN4-203, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 3

Gene LRFN4, Length 274 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-203ENST00000531590 TERF2IPQ9NYB0 399 aa22.64■■□□□ 1.21
LRFN4-203ENST00000531590 CCDC7Q96M83 1385 aa22.63■■□□□ 1.21
LRFN4-203ENST00000531590 TTC21BQ7Z4L5 1316 aa22.63■■□□□ 1.21
LRFN4-203ENST00000531590 LMOD2Q6P5Q4 547 aa22.63■■□□□ 1.21
LRFN4-203ENST00000531590 MYOM1P52179 1685 aa22.62■■□□□ 1.21
LRFN4-203ENST00000531590 BRD4O60885 1362 aaPredicted RBP22.62■■□□□ 1.21
LRFN4-203ENST00000531590 ARHGEF10O15013 1369 aa22.61■■□□□ 1.21
LRFN4-203ENST00000531590 NRKQ7Z2Y5 1582 aa22.59■■□□□ 1.21
LRFN4-203ENST00000531590 SHPRHQ149N8 1683 aa22.59■■□□□ 1.21
LRFN4-203ENST00000531590 NUTM2GQ5VZR2 741 aa22.59■■□□□ 1.21
LRFN4-203ENST00000531590 ALS2Q96Q42 1657 aa22.58■■□□□ 1.21
LRFN4-203ENST00000531590 SPATA31A6Q5VVP1 1343 aa22.58■■□□□ 1.21
LRFN4-203ENST00000531590 AKAP12Q02952 1782 aa22.58■■□□□ 1.21
LRFN4-203ENST00000531590 EDC4Q6P2E9 1401 aaKnown RBP22.58■■□□□ 1.21
LRFN4-203ENST00000531590 PLEKHG5O94827 1062 aa22.58■■□□□ 1.21
LRFN4-203ENST00000531590 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.58■■□□□ 1.21
LRFN4-203ENST00000531590 ABTB2Q8N961 1025 aa22.58■■□□□ 1.21
LRFN4-203ENST00000531590 CARD14Q9BXL6 1004 aa22.58■■□□□ 1.21
LRFN4-203ENST00000531590 LRP6O75581 1613 aa22.57■■□□□ 1.2
LRFN4-203ENST00000531590 CABLES1Q8TDN4 633 aa22.57■■□□□ 1.2
LRFN4-203ENST00000531590 MON2Q7Z3U7 1717 aa22.57■■□□□ 1.2
LRFN4-203ENST00000531590 COL22A1Q8NFW1 1626 aaPredicted RBP22.57■■□□□ 1.2
LRFN4-203ENST00000531590 TTC21AQ8NDW8 1320 aa22.57■■□□□ 1.2
LRFN4-203ENST00000531590 NUTM2BA6NNL0 878 aaPredicted RBP22.56■■□□□ 1.2
LRFN4-203ENST00000531590 NUTM2EB1AL46 878 aaPredicted RBP22.56■■□□□ 1.2
LRFN4-203ENST00000531590 NUTM2AQ8IVF1 878 aaPredicted RBP22.56■■□□□ 1.2
LRFN4-203ENST00000531590 PANK3Q9H999 370 aa22.56■■□□□ 1.2
LRFN4-203ENST00000531590 NME9Q86XW9 330 aa22.55■■□□□ 1.2
LRFN4-203ENST00000531590 ZRANB1Q9UGI0 708 aa22.54■■□□□ 1.2
LRFN4-203ENST00000531590 NSD3Q9BZ95 1437 aa22.54■■□□□ 1.2
LRFN4-203ENST00000531590 MED1Q15648 1581 aaPredicted RBP22.52■■□□□ 1.2
LRFN4-203ENST00000531590 PIK3C2AO00443 1686 aa22.52■■□□□ 1.2
LRFN4-203ENST00000531590 NLRP6P59044 892 aa22.51■■□□□ 1.19
LRFN4-203ENST00000531590 USP19O94966 1318 aa22.51■■□□□ 1.19
LRFN4-203ENST00000531590 NLRP13Q86W25 1043 aa22.5■■□□□ 1.19
LRFN4-203ENST00000531590 USP31Q70CQ4 1352 aa22.5■■□□□ 1.19
LRFN4-203ENST00000531590 ADAMTS2O95450 1211 aa22.49■■□□□ 1.19
LRFN4-203ENST00000531590 FYB1O15117 783 aa22.47■■□□□ 1.19
LRFN4-203ENST00000531590 OVOS2A0A0J9YW53 1432 aa22.47■■□□□ 1.19
LRFN4-203ENST00000531590 OVOS2Q6IE36 1432 aa22.47■■□□□ 1.19
LRFN4-203ENST00000531590 HAP1P54257 671 aaPredicted RBP22.46■■□□□ 1.19
LRFN4-203ENST00000531590 GGNBP2Q9H3C7 697 aa22.45■■□□□ 1.18
LRFN4-203ENST00000531590 SLIT3O75094 1523 aa22.45■■□□□ 1.18
LRFN4-203ENST00000531590 CRYBG1Q9Y4K1 1723 aa22.45■■□□□ 1.18
LRFN4-203ENST00000531590 GCP02774 474 aa22.44■■□□□ 1.18
LRFN4-203ENST00000531590 MEX3CQ5U5Q3 659 aaKnown RBP22.44■■□□□ 1.18
LRFN4-203ENST00000531590 ABCA3Q99758 1704 aa22.44■■□□□ 1.18
LRFN4-203ENST00000531590 PER1O15534 1290 aaPredicted RBP22.43■■□□□ 1.18
LRFN4-203ENST00000531590 PHRF1Q9P1Y6 1649 aaKnown RBP22.42■■□□□ 1.18
LRFN4-203ENST00000531590 CGNL1Q0VF96 1302 aa22.42■■□□□ 1.18
LRFN4-203ENST00000531590 C8orf37Q96NL8 207 aa22.42■■□□□ 1.18
LRFN4-203ENST00000531590 MARF1Q9Y4F3 1742 aaKnown RBP22.41■■□□□ 1.18
LRFN4-203ENST00000531590 SOX12O15370 315 aa22.41■■□□□ 1.18
LRFN4-203ENST00000531590 ZC3H6P61129 1189 aaKnown RBP22.41■■□□□ 1.18
LRFN4-203ENST00000531590 COG3Q96JB2 828 aa22.41■■□□□ 1.18
LRFN4-203ENST00000531590 KIAA0232Q92628 1395 aa22.4■■□□□ 1.18
LRFN4-203ENST00000531590 ZNF316A6NFI3 1004 aaPredicted RBP22.39■■□□□ 1.17
LRFN4-203ENST00000531590 AMER1Q5JTC6 1135 aaPredicted RBP22.39■■□□□ 1.17
LRFN4-203ENST00000531590 KNSTRNQ9Y448 316 aa22.39■■□□□ 1.17
LRFN4-203ENST00000531590 USP54Q70EL1 1684 aa22.39■■□□□ 1.17
LRFN4-203ENST00000531590 NFAT5O94916 1531 aa22.38■■□□□ 1.17
LRFN4-203ENST00000531590 FAM83GA6ND36 823 aa22.38■■□□□ 1.17
LRFN4-203ENST00000531590 KCNH5Q8NCM2 988 aa22.38■■□□□ 1.17
LRFN4-203ENST00000531590 CPDO75976 1380 aa22.38■■□□□ 1.17
LRFN4-203ENST00000531590 PRDM11Q9NQV5 511 aa22.37■■□□□ 1.17
LRFN4-203ENST00000531590 FBLN1P23142 703 aa22.36■■□□□ 1.17
LRFN4-203ENST00000531590 CHRNA2Q15822 529 aa22.36■■□□□ 1.17
LRFN4-203ENST00000531590 NGLY1Q96IV0 654 aa22.36■■□□□ 1.17
LRFN4-203ENST00000531590 RGS17Q9UGC6 210 aaPredicted RBP22.36■■□□□ 1.17
LRFN4-203ENST00000531590 AFF2P51816 1311 aa22.35■■□□□ 1.17
LRFN4-203ENST00000531590 DDX10Q13206 875 aaKnown RBP22.35■■□□□ 1.17
LRFN4-203ENST00000531590 FNBP4Q8N3X1 1017 aaPredicted RBP22.35■■□□□ 1.17
LRFN4-203ENST00000531590 ARHGEF25Q86VW2 580 aa22.34■■□□□ 1.17
LRFN4-203ENST00000531590 SLIT2O94813 1529 aa22.34■■□□□ 1.17
LRFN4-203ENST00000531590 ZBTB7CA1YPR0 619 aa22.33■■□□□ 1.17
LRFN4-203ENST00000531590 NSD2O96028 1365 aa22.33■■□□□ 1.17
LRFN4-203ENST00000531590 PHF23Q9BUL5 403 aaPredicted RBP22.32■■□□□ 1.16
LRFN4-203ENST00000531590 KIF20BQ96Q89 1820 aa22.31■■□□□ 1.16
LRFN4-203ENST00000531590 BCL9LQ86UU0 1499 aa22.31■■□□□ 1.16
LRFN4-203ENST00000531590 CC2D1BQ5T0F9 858 aaKnown RBP22.31■■□□□ 1.16
LRFN4-203ENST00000531590 BTG4Q9NY30 223 aa22.3■■□□□ 1.16
LRFN4-203ENST00000531590 AATKQ6ZMQ8 1374 aa22.29■■□□□ 1.16
LRFN4-203ENST00000531590 NPC1L1Q9UHC9 1359 aa22.29■■□□□ 1.16
LRFN4-203ENST00000531590 RRS1Q15050 365 aaKnown RBP22.29■■□□□ 1.16
LRFN4-203ENST00000531590 USP21Q9UK80 565 aa22.29■■□□□ 1.16
LRFN4-203ENST00000531590 MAP3K19Q56UN5 1328 aa22.29■■□□□ 1.16
LRFN4-203ENST00000531590 CNGB1Q14028 1251 aaPredicted RBP22.28■■□□□ 1.16
LRFN4-203ENST00000531590 AXIN2Q9Y2T1 843 aa22.28■■□□□ 1.16
LRFN4-203ENST00000531590 TNNT2P45379 298 aaPredicted RBP22.27■■□□□ 1.16
LRFN4-203ENST00000531590 UNC5CLQ8IV45 518 aa22.27■■□□□ 1.16
LRFN4-203ENST00000531590 COL14A1Q05707 1796 aaKnown RBP22.27■■□□□ 1.16
LRFN4-203ENST00000531590 MORC1Q86VD1 984 aa22.26■■□□□ 1.15
LRFN4-203ENST00000531590 LMO7Q8WWI1 1683 aa22.26■■□□□ 1.15
LRFN4-203ENST00000531590 CAMTA1Q9Y6Y1 1673 aa22.26■■□□□ 1.15
LRFN4-203ENST00000531590 ZNF772Q68DY9 489 aaPredicted RBP22.25■■□□□ 1.15
LRFN4-203ENST00000531590 POTEAQ6S8J7 498 aa22.25■■□□□ 1.15
LRFN4-203ENST00000531590 EMILIN1Q9Y6C2 1016 aa22.24■■□□□ 1.15
LRFN4-203ENST00000531590 PLCH1Q4KWH8 1693 aa22.23■■□□□ 1.15
LRFN4-203ENST00000531590 ATRNO75882 1429 aa22.23■■□□□ 1.15
LRFN4-203ENST00000531590 COL5A2P05997 1499 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms