RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 ONECUT3O60422 494 aaPredicted RBP32.02■■■□□ 2.72
TRAPPC4-210ENST00000531290 KIAA1210Q9ULL0 1709 aa32.02■■■□□ 2.72
TRAPPC4-210ENST00000531290 PRDM11Q9NQV5 511 aa32.01■■■□□ 2.71
TRAPPC4-210ENST00000531290 GLI3P10071 1580 aa32.01■■■□□ 2.71
TRAPPC4-210ENST00000531290 TRPM3Q9HCF6 1732 aaPredicted RBP32■■■□□ 2.71
TRAPPC4-210ENST00000531290 POLR3AO14802 1390 aaPredicted RBP31.99■■■□□ 2.71
TRAPPC4-210ENST00000531290 A0A0G2JS52 829 aa31.99■■■□□ 2.71
TRAPPC4-210ENST00000531290 MYT1Q01538 1121 aa31.99■■■□□ 2.71
TRAPPC4-210ENST00000531290 NUTM2GQ5VZR2 741 aa31.97■■■□□ 2.71
TRAPPC4-210ENST00000531290 CABP2Q9NPB3 220 aa31.97■■■□□ 2.71
TRAPPC4-210ENST00000531290 KRT27Q7Z3Y8 459 aa31.95■■■□□ 2.71
TRAPPC4-210ENST00000531290 ALS2Q96Q42 1657 aa31.95■■■□□ 2.7
TRAPPC4-210ENST00000531290 FAM98CQ17RN3 349 aaKnown RBP31.94■■■□□ 2.7
TRAPPC4-210ENST00000531290 ABTB2Q8N961 1025 aa31.94■■■□□ 2.7
TRAPPC4-210ENST00000531290 ABCA3Q99758 1704 aa31.93■■■□□ 2.7
TRAPPC4-210ENST00000531290 NWD2Q9ULI1 1742 aa31.92■■■□□ 2.7
TRAPPC4-210ENST00000531290 ZC3H6P61129 1189 aaKnown RBP31.92■■■□□ 2.7
TRAPPC4-210ENST00000531290 PLCH1Q4KWH8 1693 aa31.91■■■□□ 2.7
TRAPPC4-210ENST00000531290 ITSN1Q15811 1721 aa31.91■■■□□ 2.7
TRAPPC4-210ENST00000531290 KIAA0232Q92628 1395 aa31.91■■■□□ 2.7
TRAPPC4-210ENST00000531290 SF3B2Q13435 895 aaKnown RBP31.9■■■□□ 2.7
TRAPPC4-210ENST00000531290 CHRNA2Q15822 529 aa31.9■■■□□ 2.7
TRAPPC4-210ENST00000531290 ZRANB1Q9UGI0 708 aa31.9■■■□□ 2.7
TRAPPC4-210ENST00000531290 PPIP5K1Q6PFW1 1433 aa31.9■■■□□ 2.7
TRAPPC4-210ENST00000531290 BLMP54132 1417 aaPredicted RBP31.89■■■□□ 2.7
TRAPPC4-210ENST00000531290 EP400Q96L91 3159 aa31.89■■■□□ 2.69
TRAPPC4-210ENST00000531290 CABP1Q9NZU7 370 aa31.88■■■□□ 2.69
TRAPPC4-210ENST00000531290 SPATA31A5Q5VU36 1347 aa31.88■■■□□ 2.69
TRAPPC4-210ENST00000531290 SPATA31A7Q8IWB4 1347 aa31.88■■■□□ 2.69
TRAPPC4-210ENST00000531290 ROCK2O75116 1388 aaKnown RBP31.88■■■□□ 2.69
TRAPPC4-210ENST00000531290 COL14A1Q05707 1796 aaKnown RBP31.86■■■□□ 2.69
TRAPPC4-210ENST00000531290 EVC2Q86UK5 1308 aa31.86■■■□□ 2.69
TRAPPC4-210ENST00000531290 NLRP13Q86W25 1043 aa31.86■■■□□ 2.69
TRAPPC4-210ENST00000531290 STRN4Q9NRL3 753 aa31.85■■■□□ 2.69
TRAPPC4-210ENST00000531290 EVA1CP58658 441 aa31.84■■■□□ 2.69
TRAPPC4-210ENST00000531290 BRD4O60885 1362 aaPredicted RBP31.81■■■□□ 2.68
TRAPPC4-210ENST00000531290 TOPAZ1Q8N9V7 1692 aa31.8■■■□□ 2.68
TRAPPC4-210ENST00000531290 DEFB132Q7Z7B7 95 aa31.8■■■□□ 2.68
TRAPPC4-210ENST00000531290 GCP02774 474 aa31.79■■■□□ 2.68
TRAPPC4-210ENST00000531290 USP19O94966 1318 aa31.78■■■□□ 2.68
TRAPPC4-210ENST00000531290 SPATA31A1Q5TZJ5 1347 aa31.78■■■□□ 2.68
TRAPPC4-210ENST00000531290 NRAPQ86VF7 1730 aa31.77■■■□□ 2.68
TRAPPC4-210ENST00000531290 NLRP6P59044 892 aa31.76■■■□□ 2.67
TRAPPC4-210ENST00000531290 CPDO75976 1380 aa31.74■■■□□ 2.67
TRAPPC4-210ENST00000531290 USP35Q9P2H5 1018 aa31.74■■■□□ 2.67
TRAPPC4-210ENST00000531290 CRYBG1Q9Y4K1 1723 aa31.74■■■□□ 2.67
TRAPPC4-210ENST00000531290 ZNF692Q9BU19 519 aaPredicted RBP31.73■■■□□ 2.67
TRAPPC4-210ENST00000531290 USP6P35125 1406 aa31.73■■■□□ 2.67
TRAPPC4-210ENST00000531290 QRICH2Q9H0J4 1663 aa31.73■■■□□ 2.67
TRAPPC4-210ENST00000531290 TRPM1Q7Z4N2 1603 aa31.71■■■□□ 2.67
TRAPPC4-210ENST00000531290 BRWD3Q6RI45 1802 aa31.71■■■□□ 2.67
TRAPPC4-210ENST00000531290 BAG6P46379 1132 aa31.71■■■□□ 2.67
TRAPPC4-210ENST00000531290 FAM182BQ5T319 152 aa31.71■■■□□ 2.67
TRAPPC4-210ENST00000531290 CARD11Q9BXL7 1154 aa31.71■■■□□ 2.67
TRAPPC4-210ENST00000531290 TONSLQ96HA7 1378 aa31.69■■■□□ 2.66
TRAPPC4-210ENST00000531290 PHRF1Q9P1Y6 1649 aaKnown RBP31.69■■■□□ 2.66
TRAPPC4-210ENST00000531290 ZBTB7CA1YPR0 619 aa31.69■■■□□ 2.66
TRAPPC4-210ENST00000531290 LARP1Q6PKG0 1096 aaKnown RBP31.69■■■□□ 2.66
TRAPPC4-210ENST00000531290 SSH2Q76I76 1423 aa31.68■■■□□ 2.66
TRAPPC4-210ENST00000531290 BARGINQ6ZT62 677 aa31.67■■■□□ 2.66
TRAPPC4-210ENST00000531290 TRIM26Q12899 539 aaPredicted RBP31.65■■■□□ 2.66
TRAPPC4-210ENST00000531290 TCP11L2Q8N4U5 519 aa31.65■■■□□ 2.66
TRAPPC4-210ENST00000531290 NRKQ7Z2Y5 1582 aa31.64■■■□□ 2.66
TRAPPC4-210ENST00000531290 CAMTA1Q9Y6Y1 1673 aa31.64■■■□□ 2.65
TRAPPC4-210ENST00000531290 PDE3BQ13370 1112 aa31.63■■■□□ 2.65
TRAPPC4-210ENST00000531290 FAM196AQ6ZSG2 479 aa31.63■■■□□ 2.65
TRAPPC4-210ENST00000531290 TTC21BQ7Z4L5 1316 aa31.63■■■□□ 2.65
TRAPPC4-210ENST00000531290 THRAP3Q9Y2W1 955 aaKnown RBP31.62■■■□□ 2.65
TRAPPC4-210ENST00000531290 SRCAPQ6ZRS2 3230 aa31.62■■■□□ 2.65
TRAPPC4-210ENST00000531290 AATKQ6ZMQ8 1374 aa31.58■■■□□ 2.65
TRAPPC4-210ENST00000531290 TTC21AQ8NDW8 1320 aa31.58■■■□□ 2.65
TRAPPC4-210ENST00000531290 EN1Q05925 392 aaPredicted RBP31.58■■■□□ 2.65
TRAPPC4-210ENST00000531290 KCNH5Q8NCM2 988 aa31.58■■■□□ 2.65
TRAPPC4-210ENST00000531290 THSD7AQ9UPZ6 1657 aa31.57■■■□□ 2.65
TRAPPC4-210ENST00000531290 SBNO2Q9Y2G9 1366 aa31.57■■■□□ 2.64
TRAPPC4-210ENST00000531290 KTN1Q86UP2 1357 aaKnown RBP31.56■■■□□ 2.64
TRAPPC4-210ENST00000531290 TRIM37O94972 964 aa31.55■■■□□ 2.64
TRAPPC4-210ENST00000531290 TMC1Q8TDI8 760 aa31.55■■■□□ 2.64
TRAPPC4-210ENST00000531290 COL5A2P05997 1499 aaPredicted RBP31.54■■■□□ 2.64
TRAPPC4-210ENST00000531290 SOX12O15370 315 aa31.54■■■□□ 2.64
TRAPPC4-210ENST00000531290 CPSF1Q10570 1443 aaKnown RBP31.54■■■□□ 2.64
TRAPPC4-210ENST00000531290 TOM1L2Q6ZVM7 507 aa31.52■■■□□ 2.64
TRAPPC4-210ENST00000531290 SLIT3O75094 1523 aa31.52■■■□□ 2.64
TRAPPC4-210ENST00000531290 LMO7Q8WWI1 1683 aa31.51■■■□□ 2.64
TRAPPC4-210ENST00000531290 CRB1P82279 1406 aa31.51■■■□□ 2.64
TRAPPC4-210ENST00000531290 ARHGEF25Q86VW2 580 aa31.51■■■□□ 2.63
TRAPPC4-210ENST00000531290 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.5■■■□□ 2.63
TRAPPC4-210ENST00000531290 AXIN2Q9Y2T1 843 aa31.5■■■□□ 2.63
TRAPPC4-210ENST00000531290 APBA3O96018 575 aa31.49■■■□□ 2.63
TRAPPC4-210ENST00000531290 HDGFL2Q7Z4V5 671 aaPredicted RBP31.49■■■□□ 2.63
TRAPPC4-210ENST00000531290 PSDA5PKW4 1024 aaPredicted RBP31.46■■■□□ 2.63
TRAPPC4-210ENST00000531290 EZH2Q15910 746 aaKnown RBP31.46■■■□□ 2.63
TRAPPC4-210ENST00000531290 SLC12A5Q9H2X9 1139 aa31.46■■■□□ 2.63
TRAPPC4-210ENST00000531290 DISP2A7MBM2 1401 aa31.45■■■□□ 2.63
TRAPPC4-210ENST00000531290 CSB-PGBD3P0DP91 1061 aa31.45■■■□□ 2.63
TRAPPC4-210ENST00000531290 PUS7Q96PZ0 661 aaKnown RBP31.45■■■□□ 2.63
TRAPPC4-210ENST00000531290 WDR17Q8IZU2 1322 aa31.45■■■□□ 2.62
TRAPPC4-210ENST00000531290 PIK3C2AO00443 1686 aa31.44■■■□□ 2.62
TRAPPC4-210ENST00000531290 C11orf95C9JLR9 678 aaPredicted RBP31.44■■■□□ 2.62
TRAPPC4-210ENST00000531290 TERF2IPQ9NYB0 399 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms