RNA–Protein interactions for RNA: ENST00000529904.2

SNRNP35-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 382 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-206ENST00000529904 ALS2Q96Q42 1657 aa17.74■□□□□ 0.43
SNRNP35-206ENST00000529904 TESK2Q96S53 571 aa17.72■□□□□ 0.43
SNRNP35-206ENST00000529904 MARF1Q9Y4F3 1742 aaKnown RBP17.71■□□□□ 0.43
SNRNP35-206ENST00000529904 BRD4O60885 1362 aaPredicted RBP17.7■□□□□ 0.42
SNRNP35-206ENST00000529904 USP6P35125 1406 aa17.7■□□□□ 0.42
SNRNP35-206ENST00000529904 ABCA3Q99758 1704 aa17.69■□□□□ 0.42
SNRNP35-206ENST00000529904 NUTM2GQ5VZR2 741 aa17.69■□□□□ 0.42
SNRNP35-206ENST00000529904 ABTB2Q8N961 1025 aa17.69■□□□□ 0.42
SNRNP35-206ENST00000529904 TMC1Q8TDI8 760 aa17.69■□□□□ 0.42
SNRNP35-206ENST00000529904 ZNF692Q9BU19 519 aaPredicted RBP17.69■□□□□ 0.42
SNRNP35-206ENST00000529904 USP21Q9UK80 565 aa17.69■□□□□ 0.42
SNRNP35-206ENST00000529904 TMF1P82094 1093 aa17.68■□□□□ 0.42
SNRNP35-206ENST00000529904 FNBP4Q8N3X1 1017 aaPredicted RBP17.68■□□□□ 0.42
SNRNP35-206ENST00000529904 PUS7Q96PZ0 661 aaKnown RBP17.68■□□□□ 0.42
SNRNP35-206ENST00000529904 QTRT2Q9H974 415 aaKnown RBP17.68■□□□□ 0.42
SNRNP35-206ENST00000529904 KTN1Q86UP2 1357 aaKnown RBP17.66■□□□□ 0.42
SNRNP35-206ENST00000529904 RXRBP28702 533 aa17.66■□□□□ 0.42
SNRNP35-206ENST00000529904 CPSF1Q10570 1443 aaKnown RBP17.65■□□□□ 0.42
SNRNP35-206ENST00000529904 HDGFL2Q7Z4V5 671 aaPredicted RBP17.65■□□□□ 0.42
SNRNP35-206ENST00000529904 NLRP13Q86W25 1043 aa17.65■□□□□ 0.42
SNRNP35-206ENST00000529904 SLC12A5Q9H2X9 1139 aa17.65■□□□□ 0.42
SNRNP35-206ENST00000529904 AKAP12Q02952 1782 aa17.64■□□□□ 0.41
SNRNP35-206ENST00000529904 EIF4G2P78344 907 aaKnown RBP eCLIP17.64■□□□□ 0.41
SNRNP35-206ENST00000529904 CDCA8Q53HL2 280 aa17.64■□□□□ 0.41
SNRNP35-206ENST00000529904 TERF2IPQ9NYB0 399 aa17.64■□□□□ 0.41
SNRNP35-206ENST00000529904 CRYBG1Q9Y4K1 1723 aa17.64■□□□□ 0.41
SNRNP35-206ENST00000529904 SOCS7O14512 581 aa17.63■□□□□ 0.41
SNRNP35-206ENST00000529904 NLRP6P59044 892 aa17.63■□□□□ 0.41
SNRNP35-206ENST00000529904 TRPC5Q9UL62 973 aaPredicted RBP17.63■□□□□ 0.41
SNRNP35-206ENST00000529904 NINLQ9Y2I6 1382 aa17.63■□□□□ 0.41
SNRNP35-206ENST00000529904 BCL9LQ86UU0 1499 aa17.63■□□□□ 0.41
SNRNP35-206ENST00000529904 SLIT2O94813 1529 aa17.62■□□□□ 0.41
SNRNP35-206ENST00000529904 PHRF1Q9P1Y6 1649 aaKnown RBP17.62■□□□□ 0.41
SNRNP35-206ENST00000529904 FAM83GA6ND36 823 aa17.62■□□□□ 0.41
SNRNP35-206ENST00000529904 RBM6P78332 1123 aaKnown RBP17.62■□□□□ 0.41
SNRNP35-206ENST00000529904 PRDM11Q9NQV5 511 aa17.62■□□□□ 0.41
SNRNP35-206ENST00000529904 TTC21BQ7Z4L5 1316 aa17.62■□□□□ 0.41
SNRNP35-206ENST00000529904 SSH2Q76I76 1423 aa17.62■□□□□ 0.41
SNRNP35-206ENST00000529904 UNC5CLQ8IV45 518 aa17.61■□□□□ 0.41
SNRNP35-206ENST00000529904 TTC21AQ8NDW8 1320 aa17.61■□□□□ 0.41
SNRNP35-206ENST00000529904 PLCH1Q4KWH8 1693 aa17.61■□□□□ 0.41
SNRNP35-206ENST00000529904 ZC3H6P61129 1189 aaKnown RBP17.6■□□□□ 0.41
SNRNP35-206ENST00000529904 USP19O94966 1318 aa17.6■□□□□ 0.41
SNRNP35-206ENST00000529904 CD163L1Q9NR16 1453 aa17.6■□□□□ 0.41
SNRNP35-206ENST00000529904 NRKQ7Z2Y5 1582 aa17.6■□□□□ 0.41
SNRNP35-206ENST00000529904 MON2Q7Z3U7 1717 aa17.6■□□□□ 0.41
SNRNP35-206ENST00000529904 COL14A1Q05707 1796 aaKnown RBP17.59■□□□□ 0.41
SNRNP35-206ENST00000529904 ATRNO75882 1429 aa17.59■□□□□ 0.41
SNRNP35-206ENST00000529904 A0A1W2PP64 1363 aa17.59■□□□□ 0.41
SNRNP35-206ENST00000529904 KIAA0232Q92628 1395 aa17.59■□□□□ 0.41
SNRNP35-206ENST00000529904 HSPA5P11021 654 aaKnown RBP17.59■□□□□ 0.41
SNRNP35-206ENST00000529904 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.59■□□□□ 0.41
SNRNP35-206ENST00000529904 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.58■□□□□ 0.41
SNRNP35-206ENST00000529904 NWD2Q9ULI1 1742 aa17.58■□□□□ 0.41
SNRNP35-206ENST00000529904 PIK3C2AO00443 1686 aa17.58■□□□□ 0.41
SNRNP35-206ENST00000529904 GCP02774 474 aa17.58■□□□□ 0.4
SNRNP35-206ENST00000529904 BTG4Q9NY30 223 aa17.58■□□□□ 0.4
SNRNP35-206ENST00000529904 EDC4Q6P2E9 1401 aaKnown RBP17.57■□□□□ 0.4
SNRNP35-206ENST00000529904 CCDC9Q9Y3X0 531 aaKnown RBP17.57■□□□□ 0.4
SNRNP35-206ENST00000529904 CDK12Q9NYV4 1490 aaPredicted RBP17.56■□□□□ 0.4
SNRNP35-206ENST00000529904 CHRNA2Q15822 529 aa17.56■□□□□ 0.4
SNRNP35-206ENST00000529904 GJD4Q96KN9 370 aaPredicted RBP17.56■□□□□ 0.4
SNRNP35-206ENST00000529904 SLIT3O75094 1523 aa17.54■□□□□ 0.4
SNRNP35-206ENST00000529904 ZBTB7CA1YPR0 619 aa17.54■□□□□ 0.4
SNRNP35-206ENST00000529904 VPS72Q15906 364 aa17.54■□□□□ 0.4
SNRNP35-206ENST00000529904 NME9Q86XW9 330 aa17.54■□□□□ 0.4
SNRNP35-206ENST00000529904 POLR3GLQ9BT43 218 aa17.54■□□□□ 0.4
SNRNP35-206ENST00000529904 CPDO75976 1380 aa17.53■□□□□ 0.4
SNRNP35-206ENST00000529904 ANKRD36BQ8N2N9 1353 aa17.53■□□□□ 0.4
SNRNP35-206ENST00000529904 KCNH5Q8NCM2 988 aa17.53■□□□□ 0.4
SNRNP35-206ENST00000529904 RGS12O14924 1447 aa17.53■□□□□ 0.4
SNRNP35-206ENST00000529904 SOX12O15370 315 aa17.52■□□□□ 0.4
SNRNP35-206ENST00000529904 NRAPQ86VF7 1730 aa17.51■□□□□ 0.39
SNRNP35-206ENST00000529904 ZRANB1Q9UGI0 708 aa17.51■□□□□ 0.39
SNRNP35-206ENST00000529904 USP31Q70CQ4 1352 aa17.51■□□□□ 0.39
SNRNP35-206ENST00000529904 EVA1CP58658 441 aa17.5■□□□□ 0.39
SNRNP35-206ENST00000529904 STRN4Q9NRL3 753 aa17.5■□□□□ 0.39
SNRNP35-206ENST00000529904 GLI3P10071 1580 aa17.49■□□□□ 0.39
SNRNP35-206ENST00000529904 MYOM1P52179 1685 aa17.49■□□□□ 0.39
SNRNP35-206ENST00000529904 COG3Q96JB2 828 aa17.47■□□□□ 0.39
SNRNP35-206ENST00000529904 AATKQ6ZMQ8 1374 aa17.47■□□□□ 0.39
SNRNP35-206ENST00000529904 USP54Q70EL1 1684 aa17.47■□□□□ 0.39
SNRNP35-206ENST00000529904 LMO7Q8WWI1 1683 aa17.47■□□□□ 0.39
SNRNP35-206ENST00000529904 CAMTA1Q9Y6Y1 1673 aa17.47■□□□□ 0.39
SNRNP35-206ENST00000529904 A0A0G2JS52 829 aa17.46■□□□□ 0.39
SNRNP35-206ENST00000529904 MYT1Q01538 1121 aa17.46■□□□□ 0.39
SNRNP35-206ENST00000529904 ARHGEF25Q86VW2 580 aa17.46■□□□□ 0.39
SNRNP35-206ENST00000529904 NFAT5O94916 1531 aa17.46■□□□□ 0.39
SNRNP35-206ENST00000529904 OVOS2A0A0J9YW53 1432 aa17.46■□□□□ 0.39
SNRNP35-206ENST00000529904 OVOS2Q6IE36 1432 aa17.46■□□□□ 0.39
SNRNP35-206ENST00000529904 SPATA31A5Q5VU36 1347 aa17.46■□□□□ 0.38
SNRNP35-206ENST00000529904 SPATA31A7Q8IWB4 1347 aa17.46■□□□□ 0.38
SNRNP35-206ENST00000529904 FAM98CQ17RN3 349 aaKnown RBP17.44■□□□□ 0.38
SNRNP35-206ENST00000529904 LARP1Q6PKG0 1096 aaKnown RBP17.43■□□□□ 0.38
SNRNP35-206ENST00000529904 SEPT12Q8IYM1 358 aa17.43■□□□□ 0.38
SNRNP35-206ENST00000529904 GGNBP2Q9H3C7 697 aa17.43■□□□□ 0.38
SNRNP35-206ENST00000529904 USP35Q9P2H5 1018 aa17.43■□□□□ 0.38
SNRNP35-206ENST00000529904 NSD3Q9BZ95 1437 aa17.43■□□□□ 0.38
SNRNP35-206ENST00000529904 SPATA31A1Q5TZJ5 1347 aa17.43■□□□□ 0.38
SNRNP35-206ENST00000529904 COL5A2P05997 1499 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms