RNA–Protein interactions for RNA: ENST00000529871.1

CASP1-211, Transcript of caspase 1, humanhuman

TSL 1 (best)

Gene CASP1, Length 1,392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1-211ENST00000529871 ACEP12821 1306 aa12.05□□□□□ -0.48
CASP1-211ENST00000529871 PRR36Q9H6K5 1346 aa12.05□□□□□ -0.48
CASP1-211ENST00000529871 PER1O15534 1290 aaPredicted RBP12.05□□□□□ -0.48
CASP1-211ENST00000529871 SHPRHQ149N8 1683 aa12.04□□□□□ -0.48
CASP1-211ENST00000529871 NPC1L1Q9UHC9 1359 aa12.04□□□□□ -0.48
CASP1-211ENST00000529871 PMFBP1Q8TBY8 1022 aa12.04□□□□□ -0.48
CASP1-211ENST00000529871 TTC21AQ8NDW8 1320 aa12.03□□□□□ -0.48
CASP1-211ENST00000529871 C1orf167Q5SNV9 1468 aa12.02□□□□□ -0.48
CASP1-211ENST00000529871 POLR3AO14802 1390 aaPredicted RBP12.02□□□□□ -0.49
CASP1-211ENST00000529871 NSD2O96028 1365 aa12.02□□□□□ -0.49
CASP1-211ENST00000529871 NPHP3Q7Z494 1330 aa12.02□□□□□ -0.49
CASP1-211ENST00000529871 CARD14Q9BXL6 1004 aa12.02□□□□□ -0.49
CASP1-211ENST00000529871 MORC1Q86VD1 984 aa12.01□□□□□ -0.49
CASP1-211ENST00000529871 ORAI2Q96SN7 254 aa12.01□□□□□ -0.49
CASP1-211ENST00000529871 CPSF1Q10570 1443 aaKnown RBP12.01□□□□□ -0.49
CASP1-211ENST00000529871 EDC4Q6P2E9 1401 aaKnown RBP12.01□□□□□ -0.49
CASP1-211ENST00000529871 A0A1W2PP64 1363 aa12□□□□□ -0.49
CASP1-211ENST00000529871 FMN2Q9NZ56 1722 aa12□□□□□ -0.49
CASP1-211ENST00000529871 FOXO3O43524 673 aa12□□□□□ -0.49
CASP1-211ENST00000529871 PAK3O75914 559 aaPredicted RBP12□□□□□ -0.49
CASP1-211ENST00000529871 KRT28Q7Z3Y7 464 aa12□□□□□ -0.49
CASP1-211ENST00000529871 COG3Q96JB2 828 aa12□□□□□ -0.49
CASP1-211ENST00000529871 MST1RQ04912 1400 aa12□□□□□ -0.49
CASP1-211ENST00000529871 NSD3Q9BZ95 1437 aa12□□□□□ -0.49
CASP1-211ENST00000529871 ITSN1Q15811 1721 aa11.99□□□□□ -0.49
CASP1-211ENST00000529871 NALCNQ8IZF0 1738 aa11.99□□□□□ -0.49
CASP1-211ENST00000529871 AMER1Q5JTC6 1135 aaPredicted RBP11.99□□□□□ -0.49
CASP1-211ENST00000529871 CC2D1BQ5T0F9 858 aaKnown RBP11.99□□□□□ -0.49
CASP1-211ENST00000529871 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.99□□□□□ -0.49
CASP1-211ENST00000529871 PRKRIP1Q9H875 184 aaPredicted RBP11.99□□□□□ -0.49
CASP1-211ENST00000529871 TTC21BQ7Z4L5 1316 aa11.98□□□□□ -0.49
CASP1-211ENST00000529871 ABTB2Q8N961 1025 aa11.98□□□□□ -0.49
CASP1-211ENST00000529871 NHSL1Q5SYE7 1610 aa11.98□□□□□ -0.49
CASP1-211ENST00000529871 USP6P35125 1406 aa11.97□□□□□ -0.49
CASP1-211ENST00000529871 CCER2I3L3R5 266 aa11.97□□□□□ -0.49
CASP1-211ENST00000529871 FYB1O15117 783 aa11.97□□□□□ -0.49
CASP1-211ENST00000529871 BRINP3Q76B58 766 aa11.97□□□□□ -0.49
CASP1-211ENST00000529871 NLRP13Q86W25 1043 aa11.97□□□□□ -0.49
CASP1-211ENST00000529871 AHDC1Q5TGY3 1603 aaPredicted RBP11.96□□□□□ -0.49
CASP1-211ENST00000529871 NLRP6P59044 892 aa11.95□□□□□ -0.5
CASP1-211ENST00000529871 CNGB1Q14028 1251 aaPredicted RBP11.95□□□□□ -0.5
CASP1-211ENST00000529871 KCNH5Q8NCM2 988 aa11.95□□□□□ -0.5
CASP1-211ENST00000529871 CD163L1Q9NR16 1453 aa11.95□□□□□ -0.5
CASP1-211ENST00000529871 KIF1AQ12756 1690 aa11.95□□□□□ -0.5
CASP1-211ENST00000529871 MYBBP1AQ9BQG0 1328 aaKnown RBP11.95□□□□□ -0.5
CASP1-211ENST00000529871 MEX3CQ5U5Q3 659 aaKnown RBP11.94□□□□□ -0.5
CASP1-211ENST00000529871 LMOD2Q6P5Q4 547 aa11.94□□□□□ -0.5
CASP1-211ENST00000529871 MIER1Q8N108 512 aa11.94□□□□□ -0.5
CASP1-211ENST00000529871 LRRC59Q96AG4 307 aaKnown RBP11.94□□□□□ -0.5
CASP1-211ENST00000529871 CFAP53Q96M91 514 aa11.94□□□□□ -0.5
CASP1-211ENST00000529871 RNF39Q9H2S5 420 aa11.94□□□□□ -0.5
CASP1-211ENST00000529871 SBNO1A3KN83 1393 aa11.94□□□□□ -0.5
CASP1-211ENST00000529871 MYOM1P52179 1685 aa11.94□□□□□ -0.5
CASP1-211ENST00000529871 RBM6P78332 1123 aaKnown RBP11.93□□□□□ -0.5
CASP1-211ENST00000529871 GGNBP2Q9H3C7 697 aa11.93□□□□□ -0.5
CASP1-211ENST00000529871 USP32Q8NFA0 1604 aa11.93□□□□□ -0.5
CASP1-211ENST00000529871 TOPAZ1Q8N9V7 1692 aa11.93□□□□□ -0.5
CASP1-211ENST00000529871 ARHGEF10O15013 1369 aa11.93□□□□□ -0.5
CASP1-211ENST00000529871 USP31Q70CQ4 1352 aa11.93□□□□□ -0.5
CASP1-211ENST00000529871 PARD3Q8TEW0 1356 aa11.93□□□□□ -0.5
CASP1-211ENST00000529871 NME9Q86XW9 330 aa11.92□□□□□ -0.5
CASP1-211ENST00000529871 AFF2P51816 1311 aa11.92□□□□□ -0.5
CASP1-211ENST00000529871 SSH2Q76I76 1423 aa11.91□□□□□ -0.5
CASP1-211ENST00000529871 SOS2Q07890 1332 aaPredicted RBP11.91□□□□□ -0.5
CASP1-211ENST00000529871 NUTM2BA6NNL0 878 aaPredicted RBP11.91□□□□□ -0.5
CASP1-211ENST00000529871 NUTM2EB1AL46 878 aaPredicted RBP11.91□□□□□ -0.5
CASP1-211ENST00000529871 PPP2R1AP30153 589 aa11.91□□□□□ -0.5
CASP1-211ENST00000529871 NUTM2AQ8IVF1 878 aaPredicted RBP11.91□□□□□ -0.5
CASP1-211ENST00000529871 HAP1P54257 671 aaPredicted RBP11.9□□□□□ -0.5
CASP1-211ENST00000529871 XPCQ01831 940 aaPredicted RBP11.9□□□□□ -0.5
CASP1-211ENST00000529871 RGPD8O14715 1765 aaPredicted RBP11.9□□□□□ -0.51
CASP1-211ENST00000529871 SPATA31A3Q5VYP0 1347 aa11.89□□□□□ -0.51
CASP1-211ENST00000529871 AKAP12Q02952 1782 aa11.89□□□□□ -0.51
CASP1-211ENST00000529871 TNNT2P45379 298 aaPredicted RBP11.89□□□□□ -0.51
CASP1-211ENST00000529871 CCDC125Q86Z20 511 aa11.89□□□□□ -0.51
CASP1-211ENST00000529871 MRS2Q9HD23 443 aa11.89□□□□□ -0.51
CASP1-211ENST00000529871 NUDCQ9Y266 331 aa11.89□□□□□ -0.51
CASP1-211ENST00000529871 AATKQ6ZMQ8 1374 aa11.88□□□□□ -0.51
CASP1-211ENST00000529871 BCL9LQ86UU0 1499 aa11.88□□□□□ -0.51
CASP1-211ENST00000529871 MON2Q7Z3U7 1717 aa11.88□□□□□ -0.51
CASP1-211ENST00000529871 AMPHP49418 695 aa11.87□□□□□ -0.51
CASP1-211ENST00000529871 MTHFSP49914 203 aa11.87□□□□□ -0.51
CASP1-211ENST00000529871 TNS3Q68CZ2 1445 aa11.86□□□□□ -0.51
CASP1-211ENST00000529871 PPM1GO15355 546 aaPredicted RBP11.86□□□□□ -0.51
CASP1-211ENST00000529871 GCP02774 474 aa11.86□□□□□ -0.51
CASP1-211ENST00000529871 NUTM2GQ5VZR2 741 aa11.86□□□□□ -0.51
CASP1-211ENST00000529871 PNNQ9H307 717 aaKnown RBP11.86□□□□□ -0.51
CASP1-211ENST00000529871 KIF24Q5T7B8 1368 aa11.86□□□□□ -0.51
CASP1-211ENST00000529871 CEP350Q5VT06 3117 aa11.85□□□□□ -0.51
CASP1-211ENST00000529871 YY1P25490 414 aa11.85□□□□□ -0.51
CASP1-211ENST00000529871 HOXD11P31277 338 aaPredicted RBP11.85□□□□□ -0.51
CASP1-211ENST00000529871 WDR43Q15061 677 aaKnown RBP eCLIP11.85□□□□□ -0.51
CASP1-211ENST00000529871 DDX17Q92841 729 aaKnown RBP11.85□□□□□ -0.51
CASP1-211ENST00000529871 QTRT2Q9H974 415 aaKnown RBP11.85□□□□□ -0.51
CASP1-211ENST00000529871 POLKQ9UBT6 870 aa11.84□□□□□ -0.51
CASP1-211ENST00000529871 PXDNQ92626 1479 aa11.84□□□□□ -0.51
CASP1-211ENST00000529871 OVOS2A0A0J9YW53 1432 aa11.83□□□□□ -0.52
CASP1-211ENST00000529871 OVOS2Q6IE36 1432 aa11.83□□□□□ -0.52
CASP1-211ENST00000529871 SOX12O15370 315 aa11.82□□□□□ -0.52
CASP1-211ENST00000529871 DIAPH1O60610 1272 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms