RNA–Protein interactions for RNA: ENST00000529795.1

PACS1-210, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-210ENST00000529795 PPIP5K1Q6PFW1 1433 aa18.01■□□□□ 0.47
PACS1-210ENST00000529795 PCGF6Q9BYE7 350 aa18.01■□□□□ 0.47
PACS1-210ENST00000529795 CABP2Q9NPB3 220 aa18.01■□□□□ 0.47
PACS1-210ENST00000529795 SBNO2Q9Y2G9 1366 aa18.01■□□□□ 0.47
PACS1-210ENST00000529795 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.01■□□□□ 0.47
PACS1-210ENST00000529795 UNC5CLQ8IV45 518 aa18■□□□□ 0.47
PACS1-210ENST00000529795 ZNF692Q9BU19 519 aaPredicted RBP18■□□□□ 0.47
PACS1-210ENST00000529795 NWD2Q9ULI1 1742 aa17.99■□□□□ 0.47
PACS1-210ENST00000529795 CABLES1Q8TDN4 633 aa17.99■□□□□ 0.47
PACS1-210ENST00000529795 ATAD2Q6PL18 1390 aa17.99■□□□□ 0.47
PACS1-210ENST00000529795 ATRNO75882 1429 aa17.98■□□□□ 0.47
PACS1-210ENST00000529795 ABCA3Q99758 1704 aa17.98■□□□□ 0.47
PACS1-210ENST00000529795 SLIT2O94813 1529 aa17.98■□□□□ 0.47
PACS1-210ENST00000529795 BCL9LQ86UU0 1499 aa17.97■□□□□ 0.47
PACS1-210ENST00000529795 PLEKHG5O94827 1062 aa17.97■□□□□ 0.47
PACS1-210ENST00000529795 NLRP13Q86W25 1043 aa17.97■□□□□ 0.47
PACS1-210ENST00000529795 ABTB2Q8N961 1025 aa17.97■□□□□ 0.47
PACS1-210ENST00000529795 GJD4Q96KN9 370 aaPredicted RBP17.97■□□□□ 0.47
PACS1-210ENST00000529795 CABP1Q9NZU7 370 aa17.97■□□□□ 0.47
PACS1-210ENST00000529795 PUS7Q96PZ0 661 aaKnown RBP17.95■□□□□ 0.46
PACS1-210ENST00000529795 COL14A1Q05707 1796 aaKnown RBP17.94■□□□□ 0.46
PACS1-210ENST00000529795 PLCH1Q4KWH8 1693 aa17.93■□□□□ 0.46
PACS1-210ENST00000529795 FAM83GA6ND36 823 aa17.93■□□□□ 0.46
PACS1-210ENST00000529795 PRDM11Q9NQV5 511 aa17.93■□□□□ 0.46
PACS1-210ENST00000529795 VPS72Q15906 364 aa17.92■□□□□ 0.46
PACS1-210ENST00000529795 USP6P35125 1406 aa17.91■□□□□ 0.46
PACS1-210ENST00000529795 CCDC9Q9Y3X0 531 aaKnown RBP17.91■□□□□ 0.46
PACS1-210ENST00000529795 CRYBG1Q9Y4K1 1723 aa17.91■□□□□ 0.46
PACS1-210ENST00000529795 RGS12O14924 1447 aa17.9■□□□□ 0.46
PACS1-210ENST00000529795 CCER1Q8TC90 406 aaPredicted RBP17.9■□□□□ 0.46
PACS1-210ENST00000529795 BTG4Q9NY30 223 aa17.9■□□□□ 0.46
PACS1-210ENST00000529795 TTC21AQ8NDW8 1320 aa17.89■□□□□ 0.45
PACS1-210ENST00000529795 PHRF1Q9P1Y6 1649 aaKnown RBP17.88■□□□□ 0.45
PACS1-210ENST00000529795 NLRP6P59044 892 aa17.88■□□□□ 0.45
PACS1-210ENST00000529795 NUTM2GQ5VZR2 741 aa17.88■□□□□ 0.45
PACS1-210ENST00000529795 HDGFL2Q7Z4V5 671 aaPredicted RBP17.88■□□□□ 0.45
PACS1-210ENST00000529795 AKAP12Q02952 1782 aa17.88■□□□□ 0.45
PACS1-210ENST00000529795 ST20-MTHFSA0A0A6YYL1 179 aa17.87■□□□□ 0.45
PACS1-210ENST00000529795 UPF1Q92900 1129 aaKnown RBP eCLIP17.87■□□□□ 0.45
PACS1-210ENST00000529795 TERF2IPQ9NYB0 399 aa17.87■□□□□ 0.45
PACS1-210ENST00000529795 KTN1Q86UP2 1357 aaKnown RBP17.87■□□□□ 0.45
PACS1-210ENST00000529795 GCP02774 474 aa17.86■□□□□ 0.45
PACS1-210ENST00000529795 CDCA8Q53HL2 280 aa17.86■□□□□ 0.45
PACS1-210ENST00000529795 TMC1Q8TDI8 760 aa17.86■□□□□ 0.45
PACS1-210ENST00000529795 USP19O94966 1318 aa17.86■□□□□ 0.45
PACS1-210ENST00000529795 KIAA0232Q92628 1395 aa17.86■□□□□ 0.45
PACS1-210ENST00000529795 NINLQ9Y2I6 1382 aa17.86■□□□□ 0.45
PACS1-210ENST00000529795 CPDO75976 1380 aa17.85■□□□□ 0.45
PACS1-210ENST00000529795 ZC3H6P61129 1189 aaKnown RBP17.85■□□□□ 0.45
PACS1-210ENST00000529795 KCNH5Q8NCM2 988 aa17.85■□□□□ 0.45
PACS1-210ENST00000529795 CPSF1Q10570 1443 aaKnown RBP17.84■□□□□ 0.45
PACS1-210ENST00000529795 TTC21BQ7Z4L5 1316 aa17.84■□□□□ 0.45
PACS1-210ENST00000529795 ONECUT3O60422 494 aaPredicted RBP17.84■□□□□ 0.45
PACS1-210ENST00000529795 EVA1CP58658 441 aa17.84■□□□□ 0.45
PACS1-210ENST00000529795 TMF1P82094 1093 aa17.84■□□□□ 0.45
PACS1-210ENST00000529795 CCDC125Q86Z20 511 aa17.84■□□□□ 0.45
PACS1-210ENST00000529795 NRAPQ86VF7 1730 aa17.83■□□□□ 0.44
PACS1-210ENST00000529795 GLI3P10071 1580 aa17.83■□□□□ 0.44
PACS1-210ENST00000529795 SSH2Q76I76 1423 aa17.82■□□□□ 0.44
PACS1-210ENST00000529795 USP47Q96K76 1375 aa17.82■□□□□ 0.44
PACS1-210ENST00000529795 MON2Q7Z3U7 1717 aa17.81■□□□□ 0.44
PACS1-210ENST00000529795 A0A0G2JS52 829 aa17.81■□□□□ 0.44
PACS1-210ENST00000529795 MYT1Q01538 1121 aa17.81■□□□□ 0.44
PACS1-210ENST00000529795 SEPT12Q8IYM1 358 aa17.81■□□□□ 0.44
PACS1-210ENST00000529795 TESK2Q96S53 571 aa17.81■□□□□ 0.44
PACS1-210ENST00000529795 SPATA31A5Q5VU36 1347 aa17.8■□□□□ 0.44
PACS1-210ENST00000529795 SPATA31A7Q8IWB4 1347 aa17.8■□□□□ 0.44
PACS1-210ENST00000529795 NRKQ7Z2Y5 1582 aa17.8■□□□□ 0.44
PACS1-210ENST00000529795 CHRNA2Q15822 529 aa17.8■□□□□ 0.44
PACS1-210ENST00000529795 SLC12A5Q9H2X9 1139 aa17.79■□□□□ 0.44
PACS1-210ENST00000529795 STRN4Q9NRL3 753 aa17.79■□□□□ 0.44
PACS1-210ENST00000529795 SLIT3O75094 1523 aa17.78■□□□□ 0.44
PACS1-210ENST00000529795 PIK3C2AO00443 1686 aa17.78■□□□□ 0.44
PACS1-210ENST00000529795 EDC4Q6P2E9 1401 aaKnown RBP17.78■□□□□ 0.44
PACS1-210ENST00000529795 AATKQ6ZMQ8 1374 aa17.77■□□□□ 0.43
PACS1-210ENST00000529795 BRWD3Q6RI45 1802 aa17.77■□□□□ 0.43
PACS1-210ENST00000529795 FAM98CQ17RN3 349 aaKnown RBP17.76■□□□□ 0.43
PACS1-210ENST00000529795 KRT27Q7Z3Y8 459 aa17.76■□□□□ 0.43
PACS1-210ENST00000529795 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.76■□□□□ 0.43
PACS1-210ENST00000529795 THRAP3Q9Y2W1 955 aaKnown RBP17.76■□□□□ 0.43
PACS1-210ENST00000529795 SPATA31A1Q5TZJ5 1347 aa17.75■□□□□ 0.43
PACS1-210ENST00000529795 SF3B2Q13435 895 aaKnown RBP17.75■□□□□ 0.43
PACS1-210ENST00000529795 USP31Q70CQ4 1352 aa17.75■□□□□ 0.43
PACS1-210ENST00000529795 ZBTB7CA1YPR0 619 aa17.74■□□□□ 0.43
PACS1-210ENST00000529795 LMO7Q8WWI1 1683 aa17.74■□□□□ 0.43
PACS1-210ENST00000529795 BARGINQ6ZT62 677 aa17.73■□□□□ 0.43
PACS1-210ENST00000529795 CD163L1Q9NR16 1453 aa17.73■□□□□ 0.43
PACS1-210ENST00000529795 CAMTA1Q9Y6Y1 1673 aa17.73■□□□□ 0.43
PACS1-210ENST00000529795 USP54Q70EL1 1684 aa17.72■□□□□ 0.43
PACS1-210ENST00000529795 A0A1W2PP64 1363 aa17.72■□□□□ 0.43
PACS1-210ENST00000529795 ARHGEF25Q86VW2 580 aa17.72■□□□□ 0.43
PACS1-210ENST00000529795 TCP11L2Q8N4U5 519 aa17.72■□□□□ 0.43
PACS1-210ENST00000529795 ANKRD36BQ8N2N9 1353 aa17.71■□□□□ 0.43
PACS1-210ENST00000529795 EIF4G2P78344 907 aaKnown RBP eCLIP17.71■□□□□ 0.43
PACS1-210ENST00000529795 C11orf95C9JLR9 678 aaPredicted RBP17.7■□□□□ 0.42
PACS1-210ENST00000529795 USP35Q9P2H5 1018 aa17.7■□□□□ 0.42
PACS1-210ENST00000529795 ABCC6O95255 1503 aa17.7■□□□□ 0.42
PACS1-210ENST00000529795 CRB1P82279 1406 aa17.7■□□□□ 0.42
PACS1-210ENST00000529795 LARP1Q6PKG0 1096 aaKnown RBP17.69■□□□□ 0.42
PACS1-210ENST00000529795 COG3Q96JB2 828 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms