RNA–Protein interactions for RNA: ENST00000529477.5

PTP4A2-212, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-212ENST00000529477 LMOD2Q6P5Q4 547 aa27.08■■□□□ 1.93
PTP4A2-212ENST00000529477 CCDC61Q9Y6R9 512 aa27.08■■□□□ 1.93
PTP4A2-212ENST00000529477 CCER1Q8TC90 406 aaPredicted RBP27.06■■□□□ 1.92
PTP4A2-212ENST00000529477 EVC2Q86UK5 1308 aa27.06■■□□□ 1.92
PTP4A2-212ENST00000529477 ARHGEF10O15013 1369 aa27.06■■□□□ 1.92
PTP4A2-212ENST00000529477 BLMP54132 1417 aaPredicted RBP27.06■■□□□ 1.92
PTP4A2-212ENST00000529477 TIMELESSQ9UNS1 1208 aa27.05■■□□□ 1.92
PTP4A2-212ENST00000529477 HAP1P54257 671 aaPredicted RBP27.04■■□□□ 1.92
PTP4A2-212ENST00000529477 TOPAZ1Q8N9V7 1692 aa27.03■■□□□ 1.92
PTP4A2-212ENST00000529477 UNC5CLQ8IV45 518 aa27.02■■□□□ 1.92
PTP4A2-212ENST00000529477 CABP2Q9NPB3 220 aa27.02■■□□□ 1.92
PTP4A2-212ENST00000529477 NWD2Q9ULI1 1742 aa27.01■■□□□ 1.91
PTP4A2-212ENST00000529477 PAK3O75914 559 aaPredicted RBP27■■□□□ 1.91
PTP4A2-212ENST00000529477 PLCH1Q4KWH8 1693 aa27■■□□□ 1.91
PTP4A2-212ENST00000529477 LRP5O75197 1615 aa27■■□□□ 1.91
PTP4A2-212ENST00000529477 ABCA3Q99758 1704 aa26.99■■□□□ 1.91
PTP4A2-212ENST00000529477 TRPM3Q9HCF6 1732 aaPredicted RBP26.99■■□□□ 1.91
PTP4A2-212ENST00000529477 PLEKHG3A1L390 1219 aa26.98■■□□□ 1.91
PTP4A2-212ENST00000529477 PPIP5K1Q6PFW1 1433 aa26.98■■□□□ 1.91
PTP4A2-212ENST00000529477 ACEP12821 1306 aa26.97■■□□□ 1.91
PTP4A2-212ENST00000529477 POLR3AO14802 1390 aaPredicted RBP26.97■■□□□ 1.91
PTP4A2-212ENST00000529477 PLEKHG5O94827 1062 aa26.96■■□□□ 1.91
PTP4A2-212ENST00000529477 SBNO2Q9Y2G9 1366 aa26.96■■□□□ 1.91
PTP4A2-212ENST00000529477 ALS2Q96Q42 1657 aa26.95■■□□□ 1.9
PTP4A2-212ENST00000529477 CABLES1Q8TDN4 633 aa26.92■■□□□ 1.9
PTP4A2-212ENST00000529477 CABP1Q9NZU7 370 aa26.91■■□□□ 1.9
PTP4A2-212ENST00000529477 SLC24A1O60721 1099 aa26.9■■□□□ 1.9
PTP4A2-212ENST00000529477 DEFB132Q7Z7B7 95 aa26.9■■□□□ 1.9
PTP4A2-212ENST00000529477 VPS72Q15906 364 aa26.89■■□□□ 1.9
PTP4A2-212ENST00000529477 ONECUT3O60422 494 aaPredicted RBP26.88■■□□□ 1.89
PTP4A2-212ENST00000529477 BRD4O60885 1362 aaPredicted RBP26.87■■□□□ 1.89
PTP4A2-212ENST00000529477 SEPT12Q8IYM1 358 aa26.87■■□□□ 1.89
PTP4A2-212ENST00000529477 NRAPQ86VF7 1730 aa26.87■■□□□ 1.89
PTP4A2-212ENST00000529477 ST20-MTHFSA0A0A6YYL1 179 aa26.84■■□□□ 1.89
PTP4A2-212ENST00000529477 ABTB2Q8N961 1025 aa26.84■■□□□ 1.89
PTP4A2-212ENST00000529477 SF3B2Q13435 895 aaKnown RBP26.83■■□□□ 1.89
PTP4A2-212ENST00000529477 ZNF692Q9BU19 519 aaPredicted RBP26.83■■□□□ 1.89
PTP4A2-212ENST00000529477 USP47Q96K76 1375 aa26.82■■□□□ 1.88
PTP4A2-212ENST00000529477 USP6P35125 1406 aa26.82■■□□□ 1.88
PTP4A2-212ENST00000529477 NUTM2GQ5VZR2 741 aa26.8■■□□□ 1.88
PTP4A2-212ENST00000529477 KRT27Q7Z3Y8 459 aa26.8■■□□□ 1.88
PTP4A2-212ENST00000529477 NLRP13Q86W25 1043 aa26.79■■□□□ 1.88
PTP4A2-212ENST00000529477 CRYBG1Q9Y4K1 1723 aa26.79■■□□□ 1.88
PTP4A2-212ENST00000529477 TMC1Q8TDI8 760 aa26.78■■□□□ 1.88
PTP4A2-212ENST00000529477 PUS7Q96PZ0 661 aaKnown RBP26.78■■□□□ 1.88
PTP4A2-212ENST00000529477 RGPD1P0DJD0 1748 aa26.78■■□□□ 1.88
PTP4A2-212ENST00000529477 AKAP12Q02952 1782 aa26.77■■□□□ 1.88
PTP4A2-212ENST00000529477 TESK2Q96S53 571 aa26.77■■□□□ 1.88
PTP4A2-212ENST00000529477 COL14A1Q05707 1796 aaKnown RBP26.76■■□□□ 1.87
PTP4A2-212ENST00000529477 PHRF1Q9P1Y6 1649 aaKnown RBP26.76■■□□□ 1.87
PTP4A2-212ENST00000529477 FAM83GA6ND36 823 aa26.75■■□□□ 1.87
PTP4A2-212ENST00000529477 PRDM11Q9NQV5 511 aa26.75■■□□□ 1.87
PTP4A2-212ENST00000529477 KTN1Q86UP2 1357 aaKnown RBP26.74■■□□□ 1.87
PTP4A2-212ENST00000529477 TMF1P82094 1093 aa26.73■■□□□ 1.87
PTP4A2-212ENST00000529477 HDGFL2Q7Z4V5 671 aaPredicted RBP26.73■■□□□ 1.87
PTP4A2-212ENST00000529477 CCDC9Q9Y3X0 531 aaKnown RBP26.73■■□□□ 1.87
PTP4A2-212ENST00000529477 NLRP6P59044 892 aa26.72■■□□□ 1.87
PTP4A2-212ENST00000529477 TNS1Q9HBL0 1735 aaKnown RBP26.72■■□□□ 1.87
PTP4A2-212ENST00000529477 CPSF1Q10570 1443 aaKnown RBP26.72■■□□□ 1.87
PTP4A2-212ENST00000529477 THSD7AQ9UPZ6 1657 aa26.71■■□□□ 1.87
PTP4A2-212ENST00000529477 BAG6P46379 1132 aa26.71■■□□□ 1.87
PTP4A2-212ENST00000529477 TERF2IPQ9NYB0 399 aa26.71■■□□□ 1.87
PTP4A2-212ENST00000529477 NINLQ9Y2I6 1382 aa26.71■■□□□ 1.87
PTP4A2-212ENST00000529477 TTC21AQ8NDW8 1320 aa26.7■■□□□ 1.87
PTP4A2-212ENST00000529477 ZC3H6P61129 1189 aaKnown RBP26.7■■□□□ 1.86
PTP4A2-212ENST00000529477 CDCA8Q53HL2 280 aa26.7■■□□□ 1.86
PTP4A2-212ENST00000529477 BTG4Q9NY30 223 aa26.7■■□□□ 1.86
PTP4A2-212ENST00000529477 KIAA0232Q92628 1395 aa26.7■■□□□ 1.86
PTP4A2-212ENST00000529477 USP19O94966 1318 aa26.69■■□□□ 1.86
PTP4A2-212ENST00000529477 TTC21BQ7Z4L5 1316 aa26.69■■□□□ 1.86
PTP4A2-212ENST00000529477 SSH2Q76I76 1423 aa26.69■■□□□ 1.86
PTP4A2-212ENST00000529477 MON2Q7Z3U7 1717 aa26.69■■□□□ 1.86
PTP4A2-212ENST00000529477 DISP2A7MBM2 1401 aa26.68■■□□□ 1.86
PTP4A2-212ENST00000529477 SLC12A5Q9H2X9 1139 aa26.68■■□□□ 1.86
PTP4A2-212ENST00000529477 NRKQ7Z2Y5 1582 aa26.67■■□□□ 1.86
PTP4A2-212ENST00000529477 PIK3C2AO00443 1686 aa26.66■■□□□ 1.86
PTP4A2-212ENST00000529477 PSDA5PKW4 1024 aaPredicted RBP26.66■■□□□ 1.86
PTP4A2-212ENST00000529477 GCP02774 474 aa26.66■■□□□ 1.86
PTP4A2-212ENST00000529477 FAM98CQ17RN3 349 aaKnown RBP26.65■■□□□ 1.86
PTP4A2-212ENST00000529477 CHRNA2Q15822 529 aa26.64■■□□□ 1.86
PTP4A2-212ENST00000529477 A0A0G2JS52 829 aa26.63■■□□□ 1.85
PTP4A2-212ENST00000529477 MYT1Q01538 1121 aa26.63■■□□□ 1.85
PTP4A2-212ENST00000529477 CD163L1Q9NR16 1453 aa26.62■■□□□ 1.85
PTP4A2-212ENST00000529477 CPDO75976 1380 aa26.62■■□□□ 1.85
PTP4A2-212ENST00000529477 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.62■■□□□ 1.85
PTP4A2-212ENST00000529477 EIF4G2P78344 907 aaKnown RBP eCLIP26.61■■□□□ 1.857e-15■■■■■ 46
PTP4A2-212ENST00000529477 KCNH5Q8NCM2 988 aa26.61■■□□□ 1.85
PTP4A2-212ENST00000529477 EDC4Q6P2E9 1401 aaKnown RBP26.61■■□□□ 1.85
PTP4A2-212ENST00000529477 SPATA31A5Q5VU36 1347 aa26.61■■□□□ 1.85
PTP4A2-212ENST00000529477 SPATA31A7Q8IWB4 1347 aa26.61■■□□□ 1.85
PTP4A2-212ENST00000529477 SLIT3O75094 1523 aa26.6■■□□□ 1.85
PTP4A2-212ENST00000529477 A0A1W2PP64 1363 aa26.6■■□□□ 1.85
PTP4A2-212ENST00000529477 ZBTB7CA1YPR0 619 aa26.59■■□□□ 1.85
PTP4A2-212ENST00000529477 EVA1CP58658 441 aa26.59■■□□□ 1.85
PTP4A2-212ENST00000529477 EN1Q05925 392 aaPredicted RBP26.59■■□□□ 1.85
PTP4A2-212ENST00000529477 STRN4Q9NRL3 753 aa26.57■■□□□ 1.84
PTP4A2-212ENST00000529477 ANKRD36BQ8N2N9 1353 aa26.55■■□□□ 1.84
PTP4A2-212ENST00000529477 SOX12O15370 315 aa26.54■■□□□ 1.84
PTP4A2-212ENST00000529477 FAM182BQ5T319 152 aa26.54■■□□□ 1.84
PTP4A2-212ENST00000529477 NME9Q86XW9 330 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms