RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 LMOD2Q6P5Q4 547 aa15.79■□□□□ 0.12
CHD7-209ENST00000529472 LRRC59Q96AG4 307 aaKnown RBP15.79■□□□□ 0.12
CHD7-209ENST00000529472 ZNF692Q9BU19 519 aaPredicted RBP15.79■□□□□ 0.12
CHD7-209ENST00000529472 ALS2Q96Q42 1657 aa15.78■□□□□ 0.12
CHD7-209ENST00000529472 SHPRHQ149N8 1683 aa15.77■□□□□ 0.12
CHD7-209ENST00000529472 SPATA31A3Q5VYP0 1347 aa15.77■□□□□ 0.12
CHD7-209ENST00000529472 PLEKHG5O94827 1062 aa15.77■□□□□ 0.12
CHD7-209ENST00000529472 EDC4Q6P2E9 1401 aaKnown RBP15.77■□□□□ 0.11
CHD7-209ENST00000529472 JCADQ9P266 1359 aa15.76■□□□□ 0.11
CHD7-209ENST00000529472 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.76■□□□□ 0.11
CHD7-209ENST00000529472 PIK3C2AO00443 1686 aa15.76■□□□□ 0.11
CHD7-209ENST00000529472 SSH2Q76I76 1423 aa15.76■□□□□ 0.11
CHD7-209ENST00000529472 PNPLA6Q8IY17 1366 aa15.75■□□□□ 0.11
CHD7-209ENST00000529472 TTC21BQ7Z4L5 1316 aa15.75■□□□□ 0.11
CHD7-209ENST00000529472 PANK3Q9H999 370 aa15.75■□□□□ 0.11
CHD7-209ENST00000529472 NSD3Q9BZ95 1437 aa15.75■□□□□ 0.11
CHD7-209ENST00000529472 ARHGEF10O15013 1369 aa15.75■□□□□ 0.11
CHD7-209ENST00000529472 BRD4O60885 1362 aaPredicted RBP15.75■□□□□ 0.11
CHD7-209ENST00000529472 NUTM2GQ5VZR2 741 aa15.74■□□□□ 0.11
CHD7-209ENST00000529472 ABTB2Q8N961 1025 aa15.74■□□□□ 0.11
CHD7-209ENST00000529472 COL22A1Q8NFW1 1626 aaPredicted RBP15.73■□□□□ 0.11
CHD7-209ENST00000529472 CARD14Q9BXL6 1004 aa15.73■□□□□ 0.11
CHD7-209ENST00000529472 TTC21AQ8NDW8 1320 aa15.72■□□□□ 0.11
CHD7-209ENST00000529472 NME9Q86XW9 330 aa15.72■□□□□ 0.11
CHD7-209ENST00000529472 KIF20BQ96Q89 1820 aa15.71■□□□□ 0.11
CHD7-209ENST00000529472 ZNF316A6NFI3 1004 aaPredicted RBP15.71■□□□□ 0.11
CHD7-209ENST00000529472 ABCA3Q99758 1704 aa15.71■□□□□ 0.1
CHD7-209ENST00000529472 MED1Q15648 1581 aaPredicted RBP15.7■□□□□ 0.1
CHD7-209ENST00000529472 NUTM2BA6NNL0 878 aaPredicted RBP15.7■□□□□ 0.1
CHD7-209ENST00000529472 NUTM2EB1AL46 878 aaPredicted RBP15.7■□□□□ 0.1
CHD7-209ENST00000529472 NLRP6P59044 892 aa15.7■□□□□ 0.1
CHD7-209ENST00000529472 NUTM2AQ8IVF1 878 aaPredicted RBP15.7■□□□□ 0.1
CHD7-209ENST00000529472 CABLES1Q8TDN4 633 aa15.7■□□□□ 0.1
CHD7-209ENST00000529472 ZRANB1Q9UGI0 708 aa15.7■□□□□ 0.1
CHD7-209ENST00000529472 MARF1Q9Y4F3 1742 aaKnown RBP15.69■□□□□ 0.1
CHD7-209ENST00000529472 CRYBG1Q9Y4K1 1723 aa15.69■□□□□ 0.1
CHD7-209ENST00000529472 PHRF1Q9P1Y6 1649 aaKnown RBP15.68■□□□□ 0.1
CHD7-209ENST00000529472 HAP1P54257 671 aaPredicted RBP15.68■□□□□ 0.1
CHD7-209ENST00000529472 CGNL1Q0VF96 1302 aa15.68■□□□□ 0.1
CHD7-209ENST00000529472 SPATA31A6Q5VVP1 1343 aa15.68■□□□□ 0.1
CHD7-209ENST00000529472 NLRP13Q86W25 1043 aa15.67■□□□□ 0.1
CHD7-209ENST00000529472 KNSTRNQ9Y448 316 aa15.67■□□□□ 0.1
CHD7-209ENST00000529472 LRP6O75581 1613 aa15.67■□□□□ 0.1
CHD7-209ENST00000529472 DDX10Q13206 875 aaKnown RBP15.66■□□□□ 0.1
CHD7-209ENST00000529472 GGNBP2Q9H3C7 697 aa15.66■□□□□ 0.1
CHD7-209ENST00000529472 USP54Q70EL1 1684 aa15.66■□□□□ 0.1
CHD7-209ENST00000529472 USP19O94966 1318 aa15.66■□□□□ 0.1
CHD7-209ENST00000529472 USP31Q70CQ4 1352 aa15.65■□□□□ 0.1
CHD7-209ENST00000529472 FYB1O15117 783 aa15.65■□□□□ 0.1
CHD7-209ENST00000529472 SOX12O15370 315 aa15.65■□□□□ 0.1
CHD7-209ENST00000529472 ADAMTS2O95450 1211 aa15.65■□□□□ 0.1
CHD7-209ENST00000529472 COG3Q96JB2 828 aa15.65■□□□□ 0.1
CHD7-209ENST00000529472 PHF23Q9BUL5 403 aaPredicted RBP15.65■□□□□ 0.1
CHD7-209ENST00000529472 OVOS2A0A0J9YW53 1432 aa15.65■□□□□ 0.1
CHD7-209ENST00000529472 OVOS2Q6IE36 1432 aa15.65■□□□□ 0.1
CHD7-209ENST00000529472 SLIT3O75094 1523 aa15.64■□□□□ 0.09
CHD7-209ENST00000529472 MEX3CQ5U5Q3 659 aaKnown RBP15.64■□□□□ 0.09
CHD7-209ENST00000529472 ANKRD26Q9UPS8 1709 aa15.63■□□□□ 0.09
CHD7-209ENST00000529472 CNGB1Q14028 1251 aaPredicted RBP15.63■□□□□ 0.09
CHD7-209ENST00000529472 PER1O15534 1290 aaPredicted RBP15.62■□□□□ 0.09
CHD7-209ENST00000529472 NSD2O96028 1365 aa15.62■□□□□ 0.09
CHD7-209ENST00000529472 GCP02774 474 aa15.61■□□□□ 0.09
CHD7-209ENST00000529472 AMER1Q5JTC6 1135 aaPredicted RBP15.61■□□□□ 0.09
CHD7-209ENST00000529472 NFAT5O94916 1531 aa15.61■□□□□ 0.09
CHD7-209ENST00000529472 ZBTB7CA1YPR0 619 aa15.6■□□□□ 0.09
CHD7-209ENST00000529472 ZC3H6P61129 1189 aaKnown RBP15.6■□□□□ 0.09
CHD7-209ENST00000529472 CC2D1BQ5T0F9 858 aaKnown RBP15.6■□□□□ 0.09
CHD7-209ENST00000529472 C8orf37Q96NL8 207 aa15.6■□□□□ 0.09
CHD7-209ENST00000529472 KIAA0232Q92628 1395 aa15.6■□□□□ 0.09
CHD7-209ENST00000529472 KCNH5Q8NCM2 988 aa15.59■□□□□ 0.09
CHD7-209ENST00000529472 LTN1O94822 1766 aa15.58■□□□□ 0.08
CHD7-209ENST00000529472 TNNT2P45379 298 aaPredicted RBP15.58■□□□□ 0.08
CHD7-209ENST00000529472 PRDM11Q9NQV5 511 aa15.58■□□□□ 0.08
CHD7-209ENST00000529472 FBLN1P23142 703 aa15.57■□□□□ 0.08
CHD7-209ENST00000529472 CHRNA2Q15822 529 aa15.57■□□□□ 0.08
CHD7-209ENST00000529472 MORC1Q86VD1 984 aa15.57■□□□□ 0.08
CHD7-209ENST00000529472 PLCH1Q4KWH8 1693 aa15.57■□□□□ 0.08
CHD7-209ENST00000529472 COL14A1Q05707 1796 aaKnown RBP15.57■□□□□ 0.08
CHD7-209ENST00000529472 CPDO75976 1380 aa15.56■□□□□ 0.08
CHD7-209ENST00000529472 NPC1L1Q9UHC9 1359 aa15.55■□□□□ 0.08
CHD7-209ENST00000529472 FAM83GA6ND36 823 aa15.55■□□□□ 0.08
CHD7-209ENST00000529472 NGLY1Q96IV0 654 aa15.55■□□□□ 0.08
CHD7-209ENST00000529472 RRS1Q15050 365 aaKnown RBP15.54■□□□□ 0.08
CHD7-209ENST00000529472 ARHGEF25Q86VW2 580 aa15.54■□□□□ 0.08
CHD7-209ENST00000529472 AFF2P51816 1311 aa15.53■□□□□ 0.08
CHD7-209ENST00000529472 MAP2P11137 1827 aaKnown RBP15.52■□□□□ 0.08
CHD7-209ENST00000529472 NWD2Q9ULI1 1742 aa15.52■□□□□ 0.08
CHD7-209ENST00000529472 MAP3K19Q56UN5 1328 aa15.52■□□□□ 0.08
CHD7-209ENST00000529472 LMO7Q8WWI1 1683 aa15.52■□□□□ 0.08
CHD7-209ENST00000529472 COL18A1P39060 1754 aa15.52■□□□□ 0.07
CHD7-209ENST00000529472 RGPD5Q99666 1765 aa15.52■□□□□ 0.07
CHD7-209ENST00000529472 AATKQ6ZMQ8 1374 aa15.51■□□□□ 0.07
CHD7-209ENST00000529472 BTG4Q9NY30 223 aa15.51■□□□□ 0.07
CHD7-209ENST00000529472 SLIT2O94813 1529 aa15.51■□□□□ 0.07
CHD7-209ENST00000529472 PEAK1Q9H792 1746 aa15.51■□□□□ 0.07
CHD7-209ENST00000529472 PPM1GO15355 546 aaPredicted RBP15.5■□□□□ 0.07
CHD7-209ENST00000529472 AMPHP49418 695 aa15.5■□□□□ 0.07
CHD7-209ENST00000529472 USP21Q9UK80 565 aa15.5■□□□□ 0.07
CHD7-209ENST00000529472 EMILIN1Q9Y6C2 1016 aa15.5■□□□□ 0.07
CHD7-209ENST00000529472 NRAPQ86VF7 1730 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms