RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 TERF2IPQ9NYB0 399 aa20.59■□□□□ 0.89
TM9SF1-208ENST00000529332 ATP7BP35670 1465 aa20.58■□□□□ 0.89
TM9SF1-208ENST00000529332 NCKAP5LQ9HCH0 1330 aa20.58■□□□□ 0.88
TM9SF1-208ENST00000529332 DEKP35659 375 aaKnown RBP20.57■□□□□ 0.88
TM9SF1-208ENST00000529332 A0A1W2PP64 1363 aa20.56■□□□□ 0.88
TM9SF1-208ENST00000529332 KCNA6P17658 529 aa20.56■□□□□ 0.88
TM9SF1-208ENST00000529332 HDGFL2Q7Z4V5 671 aaPredicted RBP20.56■□□□□ 0.88
TM9SF1-208ENST00000529332 CGNL1Q0VF96 1302 aa20.55■□□□□ 0.88
TM9SF1-208ENST00000529332 NWD1Q149M9 1564 aa20.55■□□□□ 0.88
TM9SF1-208ENST00000529332 NSD2O96028 1365 aa20.54■□□□□ 0.88
TM9SF1-208ENST00000529332 ITSN1Q15811 1721 aa20.54■□□□□ 0.88
TM9SF1-208ENST00000529332 PPIP5K1Q6PFW1 1433 aa20.53■□□□□ 0.88
TM9SF1-208ENST00000529332 TOPAZ1Q8N9V7 1692 aa20.53■□□□□ 0.88
TM9SF1-208ENST00000529332 NKTRP30414 1462 aaKnown RBP20.53■□□□□ 0.88
TM9SF1-208ENST00000529332 CD163L1Q9NR16 1453 aa20.53■□□□□ 0.88
TM9SF1-208ENST00000529332 CENPQQ7L2Z9 268 aaPredicted RBP20.53■□□□□ 0.88
TM9SF1-208ENST00000529332 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.53■□□□□ 0.88
TM9SF1-208ENST00000529332 LMTK3Q96Q04 1460 aa20.53■□□□□ 0.88
TM9SF1-208ENST00000529332 NUDT16Q96DE0 195 aaKnown RBP20.53■□□□□ 0.88
TM9SF1-208ENST00000529332 CABP1Q9NZU7 370 aa20.53■□□□□ 0.88
TM9SF1-208ENST00000529332 DMRT2Q9Y5R5 561 aa20.53■□□□□ 0.88
TM9SF1-208ENST00000529332 CDC42BPGQ6DT37 1551 aa20.52■□□□□ 0.87
TM9SF1-208ENST00000529332 CCDC61Q9Y6R9 512 aa20.51■□□□□ 0.87
TM9SF1-208ENST00000529332 POLR3AO14802 1390 aaPredicted RBP20.5■□□□□ 0.87
TM9SF1-208ENST00000529332 AKAP12Q02952 1782 aa20.5■□□□□ 0.87
TM9SF1-208ENST00000529332 NALCNQ8IZF0 1738 aa20.5■□□□□ 0.87
TM9SF1-208ENST00000529332 ANKRD26Q9UPS8 1709 aa20.5■□□□□ 0.87
TM9SF1-208ENST00000529332 KIF20BQ96Q89 1820 aa20.5■□□□□ 0.87
TM9SF1-208ENST00000529332 E9PSI1 815 aa20.5■□□□□ 0.87
TM9SF1-208ENST00000529332 BCAR3O75815 825 aa20.49■□□□□ 0.87
TM9SF1-208ENST00000529332 MON2Q7Z3U7 1717 aa20.48■□□□□ 0.87
TM9SF1-208ENST00000529332 FMN2Q9NZ56 1722 aa20.48■□□□□ 0.87
TM9SF1-208ENST00000529332 CPSF1Q10570 1443 aaKnown RBP20.47■□□□□ 0.87
TM9SF1-208ENST00000529332 HSPA2P54652 639 aa20.47■□□□□ 0.87
TM9SF1-208ENST00000529332 PRR36Q9H6K5 1346 aa20.46■□□□□ 0.87
TM9SF1-208ENST00000529332 MORC1Q86VD1 984 aa20.46■□□□□ 0.87
TM9SF1-208ENST00000529332 NGEFQ8N5V2 710 aa20.46■□□□□ 0.87
TM9SF1-208ENST00000529332 ANKARQ7Z5J8 1434 aa20.46■□□□□ 0.87
TM9SF1-208ENST00000529332 SHPRHQ149N8 1683 aa20.46■□□□□ 0.87
TM9SF1-208ENST00000529332 EDC4Q6P2E9 1401 aaKnown RBP20.45■□□□□ 0.86
TM9SF1-208ENST00000529332 ADGRL3Q9HAR2 1447 aa20.44■□□□□ 0.86
TM9SF1-208ENST00000529332 STRCQ7RTU9 1775 aa20.44■□□□□ 0.86
TM9SF1-208ENST00000529332 WWC1Q8IX03 1113 aa20.44■□□□□ 0.86
TM9SF1-208ENST00000529332 RTL5Q5HYW3 569 aaPredicted RBP20.43■□□□□ 0.86
TM9SF1-208ENST00000529332 RGPD8O14715 1765 aaPredicted RBP20.43■□□□□ 0.86
TM9SF1-208ENST00000529332 TNNT2P45379 298 aaPredicted RBP20.42■□□□□ 0.86
TM9SF1-208ENST00000529332 ZNF692Q9BU19 519 aaPredicted RBP20.42■□□□□ 0.86
TM9SF1-208ENST00000529332 PLEKHG3A1L390 1219 aa20.41■□□□□ 0.86
TM9SF1-208ENST00000529332 LAS1LQ9Y4W2 734 aaKnown RBP20.41■□□□□ 0.86
TM9SF1-208ENST00000529332 C8orf34Q49A92 452 aa20.41■□□□□ 0.86
TM9SF1-208ENST00000529332 NUTM2FA1L443 756 aa20.39■□□□□ 0.86
TM9SF1-208ENST00000529332 NRKQ7Z2Y5 1582 aa20.39■□□□□ 0.85
TM9SF1-208ENST00000529332 FAM161AQ3B820 660 aa20.39■□□□□ 0.85
TM9SF1-208ENST00000529332 C14orf37Q86TY3 774 aa20.38■□□□□ 0.85
TM9SF1-208ENST00000529332 DDRGK1Q96HY6 314 aa20.38■□□□□ 0.85
TM9SF1-208ENST00000529332 IQSEC2Q5JU85 1478 aa20.38■□□□□ 0.85
TM9SF1-208ENST00000529332 FYB1O15117 783 aa20.38■□□□□ 0.85
TM9SF1-208ENST00000529332 PROSER2Q86WR7 435 aaPredicted RBP20.38■□□□□ 0.85
TM9SF1-208ENST00000529332 AEBP2Q6ZN18 517 aaPredicted RBP20.37■□□□□ 0.85
TM9SF1-208ENST00000529332 STRCP1A6NGW2 1772 aa20.37■□□□□ 0.85
TM9SF1-208ENST00000529332 RGS3P49796 1198 aa20.36■□□□□ 0.85
TM9SF1-208ENST00000529332 RUNDC1Q96C34 613 aa20.36■□□□□ 0.85
TM9SF1-208ENST00000529332 RRP7AQ9Y3A4 280 aaKnown RBP20.36■□□□□ 0.85
TM9SF1-208ENST00000529332 ACEP12821 1306 aa20.36■□□□□ 0.85
TM9SF1-208ENST00000529332 PDE3AQ14432 1141 aa20.36■□□□□ 0.85
TM9SF1-208ENST00000529332 NEUROD2Q15784 382 aa20.36■□□□□ 0.85
TM9SF1-208ENST00000529332 GGNBP2Q9H3C7 697 aa20.36■□□□□ 0.85
TM9SF1-208ENST00000529332 IGHDP01880 384 aa20.35■□□□□ 0.85
TM9SF1-208ENST00000529332 MTHFSP49914 203 aa20.35■□□□□ 0.85
TM9SF1-208ENST00000529332 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.35■□□□□ 0.85
TM9SF1-208ENST00000529332 USP6P35125 1406 aa20.35■□□□□ 0.85
TM9SF1-208ENST00000529332 TCP11L2Q8N4U5 519 aa20.35■□□□□ 0.85
TM9SF1-208ENST00000529332 PHF23Q9BUL5 403 aaPredicted RBP20.35■□□□□ 0.85
TM9SF1-208ENST00000529332 NCOA3Q9Y6Q9 1424 aa20.34■□□□□ 0.85
TM9SF1-208ENST00000529332 NEFMP07197 916 aa20.33■□□□□ 0.84
TM9SF1-208ENST00000529332 PANK1Q8TE04 598 aa20.33■□□□□ 0.84
TM9SF1-208ENST00000529332 NGDNQ8NEJ9 315 aaKnown RBP20.32■□□□□ 0.84
TM9SF1-208ENST00000529332 RBM33Q96EV2 1170 aaKnown RBP20.32■□□□□ 0.84
TM9SF1-208ENST00000529332 CFAP53Q96M91 514 aa20.31■□□□□ 0.84
TM9SF1-208ENST00000529332 COG6Q9Y2V7 657 aa20.31■□□□□ 0.84
TM9SF1-208ENST00000529332 PPM1GO15355 546 aaPredicted RBP20.3■□□□□ 0.84
TM9SF1-208ENST00000529332 RARSP54136 660 aaKnown RBP20.3■□□□□ 0.84
TM9SF1-208ENST00000529332 PMFBP1Q8TBY8 1022 aa20.3■□□□□ 0.84
TM9SF1-208ENST00000529332 CLUAP1Q96AJ1 413 aa20.3■□□□□ 0.84
TM9SF1-208ENST00000529332 TTC21BQ7Z4L5 1316 aa20.29■□□□□ 0.84
TM9SF1-208ENST00000529332 CANXP27824 592 aaKnown RBP20.29■□□□□ 0.84
TM9SF1-208ENST00000529332 SLC4A3P48751 1232 aa20.29■□□□□ 0.84
TM9SF1-208ENST00000529332 USP35Q9P2H5 1018 aa20.29■□□□□ 0.84
TM9SF1-208ENST00000529332 TTC21AQ8NDW8 1320 aa20.29■□□□□ 0.84
TM9SF1-208ENST00000529332 DCCP43146 1447 aa20.29■□□□□ 0.84
TM9SF1-208ENST00000529332 WDR63Q8IWG1 891 aa20.29■□□□□ 0.84
TM9SF1-208ENST00000529332 C19orf44Q9H6X5 657 aa20.29■□□□□ 0.84
TM9SF1-208ENST00000529332 NME9Q86XW9 330 aa20.28■□□□□ 0.84
TM9SF1-208ENST00000529332 COG3Q96JB2 828 aa20.28■□□□□ 0.84
TM9SF1-208ENST00000529332 TMEM94Q12767 1356 aa20.28■□□□□ 0.84
TM9SF1-208ENST00000529332 FRAT1Q92837 279 aaPredicted RBP20.27■□□□□ 0.84
TM9SF1-208ENST00000529332 SSH2Q76I76 1423 aa20.27■□□□□ 0.84
TM9SF1-208ENST00000529332 CCDC27Q2M243 656 aa20.27■□□□□ 0.84
TM9SF1-208ENST00000529332 PHF8Q9UPP1 1060 aa20.27■□□□□ 0.84
TM9SF1-208ENST00000529332 KIF1AQ12756 1690 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms