RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 TOPAZ1Q8N9V7 1692 aa22.02■■□□□ 1.12
CAPRIN1-207ENST00000529307 PDE3BQ13370 1112 aa22.01■■□□□ 1.11
CAPRIN1-207ENST00000529307 NKTRP30414 1462 aaKnown RBP22.01■■□□□ 1.11
CAPRIN1-207ENST00000529307 MON2Q7Z3U7 1717 aa22.01■■□□□ 1.11
CAPRIN1-207ENST00000529307 NME9Q86XW9 330 aa22.01■■□□□ 1.11
CAPRIN1-207ENST00000529307 NBR1Q14596 966 aa22■■□□□ 1.11
CAPRIN1-207ENST00000529307 ZRANB1Q9UGI0 708 aa22■■□□□ 1.11
CAPRIN1-207ENST00000529307 AKAP12Q02952 1782 aa22■■□□□ 1.11
CAPRIN1-207ENST00000529307 FBLN1P23142 703 aa22■■□□□ 1.11
CAPRIN1-207ENST00000529307 CFAP53Q96M91 514 aa22■■□□□ 1.11
CAPRIN1-207ENST00000529307 ZNF521Q96K83 1311 aa21.99■■□□□ 1.11
CAPRIN1-207ENST00000529307 PLEKHG3A1L390 1219 aa21.99■■□□□ 1.11
CAPRIN1-207ENST00000529307 APAF1O14727 1248 aa21.99■■□□□ 1.11
CAPRIN1-207ENST00000529307 COL3A1P02461 1466 aaPredicted RBP21.98■■□□□ 1.11
CAPRIN1-207ENST00000529307 NPHP4O75161 1426 aaPredicted RBP21.98■■□□□ 1.11
CAPRIN1-207ENST00000529307 CHD2O14647 1828 aaKnown RBP21.98■■□□□ 1.11
CAPRIN1-207ENST00000529307 ACEP12821 1306 aa21.98■■□□□ 1.11
CAPRIN1-207ENST00000529307 ITSN1Q15811 1721 aa21.97■■□□□ 1.11
CAPRIN1-207ENST00000529307 IL27Q8NEV9 243 aa21.97■■□□□ 1.11
CAPRIN1-207ENST00000529307 ZNF692Q9BU19 519 aaPredicted RBP21.97■■□□□ 1.11
CAPRIN1-207ENST00000529307 RNF123Q5XPI4 1314 aa21.95■■□□□ 1.1
CAPRIN1-207ENST00000529307 RBM33Q96EV2 1170 aaKnown RBP21.94■■□□□ 1.1
CAPRIN1-207ENST00000529307 PNPLA6Q8IY17 1366 aa21.93■■□□□ 1.1
CAPRIN1-207ENST00000529307 RTL5Q5HYW3 569 aaPredicted RBP21.93■■□□□ 1.1
CAPRIN1-207ENST00000529307 POLKQ9UBT6 870 aa21.93■■□□□ 1.1
CAPRIN1-207ENST00000529307 NRKQ7Z2Y5 1582 aa21.93■■□□□ 1.1
CAPRIN1-207ENST00000529307 PMFBP1Q8TBY8 1022 aa21.92■■□□□ 1.1
CAPRIN1-207ENST00000529307 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.92■■□□□ 1.1
CAPRIN1-207ENST00000529307 USP6P35125 1406 aa21.92■■□□□ 1.1
CAPRIN1-207ENST00000529307 TTC21BQ7Z4L5 1316 aa21.92■■□□□ 1.1
CAPRIN1-207ENST00000529307 RGPD8O14715 1765 aaPredicted RBP21.91■■□□□ 1.1
CAPRIN1-207ENST00000529307 U2AF1L5P0DN76 240 aaPredicted RBP21.9■■□□□ 1.1
CAPRIN1-207ENST00000529307 U2AF1Q01081 240 aaKnown RBP eCLIP21.9■■□□□ 1.1
CAPRIN1-207ENST00000529307 RUNDC1Q96C34 613 aa21.9■■□□□ 1.1
CAPRIN1-207ENST00000529307 SSH2Q76I76 1423 aa21.9■■□□□ 1.1
CAPRIN1-207ENST00000529307 IQSEC2Q5JU85 1478 aa21.89■■□□□ 1.1
CAPRIN1-207ENST00000529307 COG3Q96JB2 828 aa21.89■■□□□ 1.09
CAPRIN1-207ENST00000529307 EMILIN1Q9Y6C2 1016 aa21.89■■□□□ 1.09
CAPRIN1-207ENST00000529307 NALCNQ8IZF0 1738 aa21.88■■□□□ 1.09
CAPRIN1-207ENST00000529307 PAK3O75914 559 aaPredicted RBP21.88■■□□□ 1.09
CAPRIN1-207ENST00000529307 SPINK5Q9NQ38 1064 aaPredicted RBP21.88■■□□□ 1.09
CAPRIN1-207ENST00000529307 DMRT2Q9Y5R5 561 aa21.88■■□□□ 1.09
CAPRIN1-207ENST00000529307 FMN2Q9NZ56 1722 aa21.88■■□□□ 1.09
CAPRIN1-207ENST00000529307 GOLGA2Q08379 1002 aa21.87■■□□□ 1.09
CAPRIN1-207ENST00000529307 ANKARQ7Z5J8 1434 aa21.87■■□□□ 1.09
CAPRIN1-207ENST00000529307 DUSP27Q5VZP5 1158 aa21.87■■□□□ 1.09
CAPRIN1-207ENST00000529307 TCP11L2Q8N4U5 519 aa21.87■■□□□ 1.09
CAPRIN1-207ENST00000529307 PPP4R2Q9NY27 417 aa21.87■■□□□ 1.09
CAPRIN1-207ENST00000529307 RCAN3Q9UKA8 241 aa21.87■■□□□ 1.09
CAPRIN1-207ENST00000529307 AATKQ6ZMQ8 1374 aa21.87■■□□□ 1.09
CAPRIN1-207ENST00000529307 U2SURPO15042 1029 aaKnown RBP21.86■■□□□ 1.09
CAPRIN1-207ENST00000529307 PPM1GO15355 546 aaPredicted RBP21.86■■□□□ 1.09
CAPRIN1-207ENST00000529307 RRP7AQ9Y3A4 280 aaKnown RBP21.86■■□□□ 1.09
CAPRIN1-207ENST00000529307 MAP2P11137 1827 aaKnown RBP21.86■■□□□ 1.09
CAPRIN1-207ENST00000529307 DIAPH1O60610 1272 aaKnown RBP21.85■■□□□ 1.09
CAPRIN1-207ENST00000529307 SLFN5Q08AF3 891 aa21.85■■□□□ 1.09
CAPRIN1-207ENST00000529307 OVOS2A0A0J9YW53 1432 aa21.84■■□□□ 1.09
CAPRIN1-207ENST00000529307 OVOS2Q6IE36 1432 aa21.84■■□□□ 1.09
CAPRIN1-207ENST00000529307 RRS1Q15050 365 aaKnown RBP21.84■■□□□ 1.09
CAPRIN1-207ENST00000529307 NGDNQ8NEJ9 315 aaKnown RBP21.84■■□□□ 1.09
CAPRIN1-207ENST00000529307 RTN4Q9NQC3 1192 aaKnown RBP21.84■■□□□ 1.09
CAPRIN1-207ENST00000529307 WWC1Q8IX03 1113 aa21.83■■□□□ 1.09
CAPRIN1-207ENST00000529307 TRMT2AQ8IZ69 625 aaKnown RBP21.83■■□□□ 1.09
CAPRIN1-207ENST00000529307 NGEFQ8N5V2 710 aa21.83■■□□□ 1.09
CAPRIN1-207ENST00000529307 PLEKHF1Q96S99 279 aa21.83■■□□□ 1.09
CAPRIN1-207ENST00000529307 NEUROD2Q15784 382 aa21.83■■□□□ 1.09
CAPRIN1-207ENST00000529307 PHF23Q9BUL5 403 aaPredicted RBP21.82■■□□□ 1.08
CAPRIN1-207ENST00000529307 ADGRL3Q9HAR2 1447 aa21.82■■□□□ 1.08
CAPRIN1-207ENST00000529307 KDM4FA0A1W2PPD8 638 aa21.82■■□□□ 1.08
CAPRIN1-207ENST00000529307 NWD1Q149M9 1564 aa21.81■■□□□ 1.08
CAPRIN1-207ENST00000529307 RRP1P56182 461 aaKnown RBP21.8■■□□□ 1.08
CAPRIN1-207ENST00000529307 CDK12Q9NYV4 1490 aaPredicted RBP21.8■■□□□ 1.08
CAPRIN1-207ENST00000529307 HSPA2P54652 639 aa21.79■■□□□ 1.08
CAPRIN1-207ENST00000529307 TTC21AQ8NDW8 1320 aa21.79■■□□□ 1.08
CAPRIN1-207ENST00000529307 USP31Q70CQ4 1352 aa21.77■■□□□ 1.08
CAPRIN1-207ENST00000529307 IL13P35225 146 aa21.77■■□□□ 1.08
CAPRIN1-207ENST00000529307 E9PSI1 815 aa21.76■■□□□ 1.07
CAPRIN1-207ENST00000529307 CCDC27Q2M243 656 aa21.76■■□□□ 1.07
CAPRIN1-207ENST00000529307 PIK3C2AO00443 1686 aa21.75■■□□□ 1.07
CAPRIN1-207ENST00000529307 PHF8Q9UPP1 1060 aa21.75■■□□□ 1.07
CAPRIN1-207ENST00000529307 IPO9Q96P70 1041 aaKnown RBP21.74■■□□□ 1.07
CAPRIN1-207ENST00000529307 RSPH6AQ9H0K4 717 aa21.74■■□□□ 1.07
CAPRIN1-207ENST00000529307 LRRC7Q96NW7 1537 aa21.74■■□□□ 1.07
CAPRIN1-207ENST00000529307 NCBP3Q53F19 620 aaKnown RBP21.73■■□□□ 1.07
CAPRIN1-207ENST00000529307 C14orf37Q86TY3 774 aa21.73■■□□□ 1.07
CAPRIN1-207ENST00000529307 EIF5BO60841 1220 aaKnown RBP21.73■■□□□ 1.07
CAPRIN1-207ENST00000529307 FCHSD2O94868 740 aa21.73■■□□□ 1.07
CAPRIN1-207ENST00000529307 TMPOP42166 694 aaKnown RBP21.73■■□□□ 1.07
CAPRIN1-207ENST00000529307 PROSER2Q86WR7 435 aaPredicted RBP21.73■■□□□ 1.07
CAPRIN1-207ENST00000529307 PKNOX2Q96KN3 472 aa21.73■■□□□ 1.07
CAPRIN1-207ENST00000529307 SOX12O15370 315 aa21.72■■□□□ 1.07
CAPRIN1-207ENST00000529307 PEAK1Q9H792 1746 aa21.71■■□□□ 1.07
CAPRIN1-207ENST00000529307 PLIN1O60240 522 aa21.71■■□□□ 1.07
CAPRIN1-207ENST00000529307 HMOX1P09601 288 aa21.71■■□□□ 1.07
CAPRIN1-207ENST00000529307 WDR63Q8IWG1 891 aa21.71■■□□□ 1.07
CAPRIN1-207ENST00000529307 MAPK8IP3Q9UPT6 1336 aa21.7■■□□□ 1.06
CAPRIN1-207ENST00000529307 PRKAR2BP31323 418 aa21.7■■□□□ 1.06
CAPRIN1-207ENST00000529307 ESCO1Q5FWF5 840 aa21.7■■□□□ 1.06
CAPRIN1-207ENST00000529307 TRIM35Q9UPQ4 493 aa21.7■■□□□ 1.06
CAPRIN1-207ENST00000529307 STRCP1A6NGW2 1772 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms