RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 SBNO2Q9Y2G9 1366 aa17.28■□□□□ 0.36
COPB1-206ENST00000529210 ACEP12821 1306 aa17.27■□□□□ 0.36
COPB1-206ENST00000529210 CABLES1Q8TDN4 633 aa17.27■□□□□ 0.36
COPB1-206ENST00000529210 UPF1Q92900 1129 aaKnown RBP eCLIP17.27■□□□□ 0.36
COPB1-206ENST00000529210 RALGAPBQ86X10 1494 aa17.26■□□□□ 0.35
COPB1-206ENST00000529210 GJD4Q96KN9 370 aaPredicted RBP17.26■□□□□ 0.35
COPB1-206ENST00000529210 GLI3P10071 1580 aa17.26■□□□□ 0.35
COPB1-206ENST00000529210 TONSLQ96HA7 1378 aa17.26■□□□□ 0.35
COPB1-206ENST00000529210 COL14A1Q05707 1796 aaKnown RBP17.25■□□□□ 0.35
COPB1-206ENST00000529210 PPIP5K1Q6PFW1 1433 aa17.25■□□□□ 0.35
COPB1-206ENST00000529210 HAP1P54257 671 aaPredicted RBP17.25■□□□□ 0.35
COPB1-206ENST00000529210 LMOD2Q6P5Q4 547 aa17.25■□□□□ 0.35
COPB1-206ENST00000529210 PHRF1Q9P1Y6 1649 aaKnown RBP17.25■□□□□ 0.35
COPB1-206ENST00000529210 NRAPQ86VF7 1730 aa17.24■□□□□ 0.35
COPB1-206ENST00000529210 EVC2Q86UK5 1308 aa17.24■□□□□ 0.35
COPB1-206ENST00000529210 SRPK2P78362 688 aaKnown RBP17.24■□□□□ 0.35
COPB1-206ENST00000529210 FAM83GA6ND36 823 aa17.23■□□□□ 0.35
COPB1-206ENST00000529210 VPS72Q15906 364 aa17.23■□□□□ 0.35
COPB1-206ENST00000529210 CABP2Q9NPB3 220 aa17.22■□□□□ 0.35
COPB1-206ENST00000529210 ATAD2Q6PL18 1390 aa17.21■□□□□ 0.35
COPB1-206ENST00000529210 ONECUT3O60422 494 aaPredicted RBP17.21■□□□□ 0.35
COPB1-206ENST00000529210 PAK3O75914 559 aaPredicted RBP17.21■□□□□ 0.35
COPB1-206ENST00000529210 USP6P35125 1406 aa17.2■□□□□ 0.34
COPB1-206ENST00000529210 SSH2Q76I76 1423 aa17.2■□□□□ 0.34
COPB1-206ENST00000529210 USP19O94966 1318 aa17.2■□□□□ 0.34
COPB1-206ENST00000529210 EP400Q96L91 3159 aa17.18■□□□□ 0.34
COPB1-206ENST00000529210 CARD11Q9BXL7 1154 aa17.18■□□□□ 0.34
COPB1-206ENST00000529210 CABP1Q9NZU7 370 aa17.18■□□□□ 0.34
COPB1-206ENST00000529210 NRKQ7Z2Y5 1582 aa17.18■□□□□ 0.34
COPB1-206ENST00000529210 AKAP12Q02952 1782 aa17.17■□□□□ 0.34
COPB1-206ENST00000529210 CPDO75976 1380 aa17.17■□□□□ 0.34
COPB1-206ENST00000529210 CLSPNQ9HAW4 1339 aa17.17■□□□□ 0.34
COPB1-206ENST00000529210 BTG4Q9NY30 223 aa17.16■□□□□ 0.34
COPB1-206ENST00000529210 CPSF1Q10570 1443 aaKnown RBP17.15■□□□□ 0.34
COPB1-206ENST00000529210 ABTB2Q8N961 1025 aa17.15■□□□□ 0.34
COPB1-206ENST00000529210 PUS7Q96PZ0 661 aaKnown RBP17.15■□□□□ 0.34
COPB1-206ENST00000529210 ZNF692Q9BU19 519 aaPredicted RBP17.15■□□□□ 0.34
COPB1-206ENST00000529210 PRDM11Q9NQV5 511 aa17.15■□□□□ 0.34
COPB1-206ENST00000529210 KIAA0232Q92628 1395 aa17.15■□□□□ 0.34
COPB1-206ENST00000529210 BRWD3Q6RI45 1802 aa17.14■□□□□ 0.34
COPB1-206ENST00000529210 LMO7Q8WWI1 1683 aa17.14■□□□□ 0.33
COPB1-206ENST00000529210 NLRP13Q86W25 1043 aa17.14■□□□□ 0.33
COPB1-206ENST00000529210 SLIT3O75094 1523 aa17.14■□□□□ 0.33
COPB1-206ENST00000529210 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
COPB1-206ENST00000529210 PIK3C2AO00443 1686 aa17.13■□□□□ 0.33
COPB1-206ENST00000529210 CCDC125Q86Z20 511 aa17.12■□□□□ 0.33
COPB1-206ENST00000529210 TIMELESSQ9UNS1 1208 aa17.12■□□□□ 0.33
COPB1-206ENST00000529210 SPATA31A5Q5VU36 1347 aa17.12■□□□□ 0.33
COPB1-206ENST00000529210 SPATA31A7Q8IWB4 1347 aa17.12■□□□□ 0.33
COPB1-206ENST00000529210 MON2Q7Z3U7 1717 aa17.12■□□□□ 0.33
COPB1-206ENST00000529210 MSH5O43196 834 aa17.11■□□□□ 0.33
COPB1-206ENST00000529210 SLC24A1O60721 1099 aa17.11■□□□□ 0.33
COPB1-206ENST00000529210 GCP02774 474 aa17.11■□□□□ 0.33
COPB1-206ENST00000529210 SEPT12Q8IYM1 358 aa17.11■□□□□ 0.33
COPB1-206ENST00000529210 THSD7AQ9UPZ6 1657 aa17.1■□□□□ 0.33
COPB1-206ENST00000529210 NUTM2GQ5VZR2 741 aa17.1■□□□□ 0.33
COPB1-206ENST00000529210 TTC21AQ8NDW8 1320 aa17.1■□□□□ 0.33
COPB1-206ENST00000529210 USP54Q70EL1 1684 aa17.1■□□□□ 0.33
COPB1-206ENST00000529210 ZC3H6P61129 1189 aaKnown RBP17.09■□□□□ 0.33
COPB1-206ENST00000529210 CD163L1Q9NR16 1453 aa17.09■□□□□ 0.33
COPB1-206ENST00000529210 CAMTA1Q9Y6Y1 1673 aa17.09■□□□□ 0.33
COPB1-206ENST00000529210 TTC21BQ7Z4L5 1316 aa17.08■□□□□ 0.32
COPB1-206ENST00000529210 TESK2Q96S53 571 aa17.08■□□□□ 0.32
COPB1-206ENST00000529210 CCDC9Q9Y3X0 531 aaKnown RBP17.08■□□□□ 0.32
COPB1-206ENST00000529210 SPATA31A1Q5TZJ5 1347 aa17.07■□□□□ 0.32
COPB1-206ENST00000529210 CHRNA2Q15822 529 aa17.07■□□□□ 0.32
COPB1-206ENST00000529210 KTN1Q86UP2 1357 aaKnown RBP17.06■□□□□ 0.32
COPB1-206ENST00000529210 NINLQ9Y2I6 1382 aa17.06■□□□□ 0.32
COPB1-206ENST00000529210 NLRP6P59044 892 aa17.06■□□□□ 0.32
COPB1-206ENST00000529210 BLMP54132 1417 aaPredicted RBP17.05■□□□□ 0.32
COPB1-206ENST00000529210 COL18A1P39060 1754 aa17.05■□□□□ 0.32
COPB1-206ENST00000529210 AATKQ6ZMQ8 1374 aa17.05■□□□□ 0.32
COPB1-206ENST00000529210 FAM98CQ17RN3 349 aaKnown RBP17.05■□□□□ 0.32
COPB1-206ENST00000529210 KRT27Q7Z3Y8 459 aa17.05■□□□□ 0.32
COPB1-206ENST00000529210 COL5A2P05997 1499 aaPredicted RBP17.05■□□□□ 0.32
COPB1-206ENST00000529210 USP31Q70CQ4 1352 aa17.04■□□□□ 0.32
COPB1-206ENST00000529210 ST20-MTHFSA0A0A6YYL1 179 aa17.04■□□□□ 0.32
COPB1-206ENST00000529210 ABCC6O95255 1503 aa17.04■□□□□ 0.32
COPB1-206ENST00000529210 BARGINQ6ZT62 677 aa17.03■□□□□ 0.32
COPB1-206ENST00000529210 NFAT5O94916 1531 aa17.02■□□□□ 0.32
COPB1-206ENST00000529210 KCNH5Q8NCM2 988 aa17.02■□□□□ 0.32
COPB1-206ENST00000529210 THRAP3Q9Y2W1 955 aaKnown RBP17.02■□□□□ 0.32
COPB1-206ENST00000529210 EDC4Q6P2E9 1401 aaKnown RBP17.02■□□□□ 0.31
COPB1-206ENST00000529210 USP47Q96K76 1375 aa17.01■□□□□ 0.31
COPB1-206ENST00000529210 ARHGEF25Q86VW2 580 aa17■□□□□ 0.31
COPB1-206ENST00000529210 SLC12A5Q9H2X9 1139 aa17■□□□□ 0.31
COPB1-206ENST00000529210 STRN4Q9NRL3 753 aa17■□□□□ 0.31
COPB1-206ENST00000529210 CRB1P82279 1406 aa16.99■□□□□ 0.31
COPB1-206ENST00000529210 EVA1CP58658 441 aa16.99■□□□□ 0.31
COPB1-206ENST00000529210 LARP1Q6PKG0 1096 aaKnown RBP16.99■□□□□ 0.31
COPB1-206ENST00000529210 HDGFL2Q7Z4V5 671 aaPredicted RBP16.99■□□□□ 0.31
COPB1-206ENST00000529210 TERF2IPQ9NYB0 399 aa16.99■□□□□ 0.31
COPB1-206ENST00000529210 A0A1W2PP64 1363 aa16.99■□□□□ 0.31
COPB1-206ENST00000529210 TCP11L2Q8N4U5 519 aa16.98■□□□□ 0.31
COPB1-206ENST00000529210 PARP4Q9UKK3 1724 aaKnown RBP16.98■□□□□ 0.31
COPB1-206ENST00000529210 TMC1Q8TDI8 760 aa16.97■□□□□ 0.31
COPB1-206ENST00000529210 PCGF6Q9BYE7 350 aa16.97■□□□□ 0.31
COPB1-206ENST00000529210 OVOS2A0A0J9YW53 1432 aa16.96■□□□□ 0.31
COPB1-206ENST00000529210 OVOS2Q6IE36 1432 aa16.96■□□□□ 0.31
COPB1-206ENST00000529210 RGPD1P0DJD0 1748 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms