RNA–Protein interactions for RNA: ENST00000529098.5

PDZD3-210, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,532 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-210ENST00000529098 ADGRL1O94910 1474 aa22.32■■□□□ 1.16
PDZD3-210ENST00000529098 FOXD4L1Q9NU39 408 aa22.32■■□□□ 1.16
PDZD3-210ENST00000529098 ZSCAN20P17040 1043 aaPredicted RBP22.31■■□□□ 1.16
PDZD3-210ENST00000529098 CCDC39Q9UFE4 941 aa22.31■■□□□ 1.16
PDZD3-210ENST00000529098 SCAF11Q99590 1463 aaKnown RBP22.31■■□□□ 1.16
PDZD3-210ENST00000529098 IQSEC2Q5JU85 1478 aa22.3■■□□□ 1.16
PDZD3-210ENST00000529098 CD2BP2O95400 341 aaKnown RBP22.3■■□□□ 1.16
PDZD3-210ENST00000529098 NEUROD2Q15784 382 aa22.3■■□□□ 1.16
PDZD3-210ENST00000529098 ARID3AQ99856 593 aa22.3■■□□□ 1.16
PDZD3-210ENST00000529098 CCDC27Q2M243 656 aa22.29■■□□□ 1.16
PDZD3-210ENST00000529098 CAVIN1Q6NZI2 390 aaKnown RBP22.29■■□□□ 1.16
PDZD3-210ENST00000529098 DDX19BQ9UMR2 479 aa22.29■■□□□ 1.16
PDZD3-210ENST00000529098 TCP11L2Q8N4U5 519 aa22.28■■□□□ 1.16
PDZD3-210ENST00000529098 GAS2L2Q8NHY3 880 aa22.28■■□□□ 1.16
PDZD3-210ENST00000529098 IQGAP3Q86VI3 1631 aa22.28■■□□□ 1.16
PDZD3-210ENST00000529098 TNNT2P45379 298 aaPredicted RBP22.28■■□□□ 1.16
PDZD3-210ENST00000529098 RRP7AQ9Y3A4 280 aaKnown RBP22.28■■□□□ 1.16
PDZD3-210ENST00000529098 GTPBP4Q9BZE4 634 aaKnown RBP22.27■■□□□ 1.16
PDZD3-210ENST00000529098 CT47B1P0C2W7 299 aaPredicted RBP22.26■■□□□ 1.15
PDZD3-210ENST00000529098 NUCB1Q02818 461 aa22.26■■□□□ 1.15
PDZD3-210ENST00000529098 CYB5RLQ6IPT4 315 aa22.26■■□□□ 1.15
PDZD3-210ENST00000529098 MADDQ8WXG6 1647 aa22.26■■□□□ 1.15
PDZD3-210ENST00000529098 BMP2KLQ5H9B9 411 aa22.26■■□□□ 1.15
PDZD3-210ENST00000529098 PRIM1P49642 420 aaKnown RBP22.25■■□□□ 1.15
PDZD3-210ENST00000529098 LMBRD1Q9NUN5 540 aa22.25■■□□□ 1.15
PDZD3-210ENST00000529098 ATP7AQ04656 1500 aa22.25■■□□□ 1.15
PDZD3-210ENST00000529098 KDM5AP29375 1690 aaKnown RBP22.25■■□□□ 1.15
PDZD3-210ENST00000529098 NCBP3Q53F19 620 aaKnown RBP22.25■■□□□ 1.15
PDZD3-210ENST00000529098 MCTP1Q6DN14 999 aa22.25■■□□□ 1.15
PDZD3-210ENST00000529098 NUCB2P80303 420 aa22.24■■□□□ 1.15
PDZD3-210ENST00000529098 MYRIPQ8NFW9 859 aa22.24■■□□□ 1.15
PDZD3-210ENST00000529098 CD109Q6YHK3 1445 aa22.24■■□□□ 1.15
PDZD3-210ENST00000529098 KIF16BQ96L93 1317 aa22.23■■□□□ 1.15
PDZD3-210ENST00000529098 KIF20AO95235 890 aa22.23■■□□□ 1.15
PDZD3-210ENST00000529098 INO80Q9ULG1 1556 aaPredicted RBP22.23■■□□□ 1.15
PDZD3-210ENST00000529098 SHPRHQ149N8 1683 aa22.22■■□□□ 1.15
PDZD3-210ENST00000529098 ITPRIPQ8IWB1 547 aa22.22■■□□□ 1.15
PDZD3-210ENST00000529098 CARD14Q9BXL6 1004 aa22.22■■□□□ 1.15
PDZD3-210ENST00000529098 SLC24A1O60721 1099 aa22.21■■□□□ 1.15
PDZD3-210ENST00000529098 TRIM27P14373 513 aa22.21■■□□□ 1.15
PDZD3-210ENST00000529098 CYP2E1P05181 493 aaPredicted RBP22.2■■□□□ 1.14
PDZD3-210ENST00000529098 CHD1LQ86WJ1 897 aa22.2■■□□□ 1.14
PDZD3-210ENST00000529098 RBM42Q9BTD8 480 aaKnown RBP22.19■■□□□ 1.14
PDZD3-210ENST00000529098 CEP152O94986 1710 aa22.19■■□□□ 1.14
PDZD3-210ENST00000529098 KIF3BO15066 747 aa22.19■■□□□ 1.14
PDZD3-210ENST00000529098 KIAA2012Q0VF49 1180 aa22.19■■□□□ 1.14
PDZD3-210ENST00000529098 LRSAM1Q6UWE0 723 aa22.19■■□□□ 1.14
PDZD3-210ENST00000529098 STAC3Q96MF2 364 aa22.19■■□□□ 1.14
PDZD3-210ENST00000529098 LNPKQ9C0E8 428 aa22.19■■□□□ 1.14
PDZD3-210ENST00000529098 PRIMPOLQ96LW4 560 aa22.18■■□□□ 1.14
PDZD3-210ENST00000529098 ZBTB40Q9NUA8 1239 aa22.18■■□□□ 1.14
PDZD3-210ENST00000529098 LETM1O95202 739 aaPredicted RBP22.18■■□□□ 1.14
PDZD3-210ENST00000529098 SMC4Q9NTJ3 1288 aa22.18■■□□□ 1.14
PDZD3-210ENST00000529098 RIMBP3CA6NJZ7 1639 aa22.17■■□□□ 1.14
PDZD3-210ENST00000529098 RIMBP3BA6NNM3 1639 aa22.17■■□□□ 1.14
PDZD3-210ENST00000529098 RIMBP3Q9UFD9 1639 aa22.17■■□□□ 1.14
PDZD3-210ENST00000529098 ATF7IPQ6VMQ6 1270 aa22.17■■□□□ 1.14
PDZD3-210ENST00000529098 CFAP74Q9C0B2 1584 aa22.17■■□□□ 1.14
PDZD3-210ENST00000529098 HMGN5P82970 282 aaKnown RBP22.16■■□□□ 1.14
PDZD3-210ENST00000529098 PPP4R3BQ5MIZ7 849 aa22.16■■□□□ 1.14
PDZD3-210ENST00000529098 KIDINS220Q9ULH0 1771 aa22.16■■□□□ 1.14
PDZD3-210ENST00000529098 GTF2F1P35269 517 aaKnown RBP eCLIP22.16■■□□□ 1.14
PDZD3-210ENST00000529098 TBC1D9Q6ZT07 1266 aa22.15■■□□□ 1.14
PDZD3-210ENST00000529098 GPT2Q8TD30 523 aa22.14■■□□□ 1.14
PDZD3-210ENST00000529098 ZNF710Q8N1W2 664 aa22.14■■□□□ 1.13
PDZD3-210ENST00000529098 RABEP1Q15276 862 aa22.13■■□□□ 1.13
PDZD3-210ENST00000529098 DNAJC5Q9H3Z4 198 aa22.13■■□□□ 1.13
PDZD3-210ENST00000529098 CWC22Q9HCG8 908 aaKnown RBP22.13■■□□□ 1.13
PDZD3-210ENST00000529098 PRPF40AO75400 957 aaKnown RBP22.13■■□□□ 1.13
PDZD3-210ENST00000529098 PDE4CQ08493 712 aa22.13■■□□□ 1.13
PDZD3-210ENST00000529098 RBM27Q9P2N5 1060 aaKnown RBP22.12■■□□□ 1.13
PDZD3-210ENST00000529098 ZNF518AQ6AHZ1 1483 aa22.12■■□□□ 1.13
PDZD3-210ENST00000529098 TMEM57Q8N5G2 664 aa22.12■■□□□ 1.13
PDZD3-210ENST00000529098 ERVK-7P63135 1459 aa22.12■■□□□ 1.13
PDZD3-210ENST00000529098 CBX1P83916 185 aa22.11■■□□□ 1.13
PDZD3-210ENST00000529098 MORC1Q86VD1 984 aa22.11■■□□□ 1.13
PDZD3-210ENST00000529098 BBXQ8WY36 941 aaPredicted RBP22.11■■□□□ 1.13
PDZD3-210ENST00000529098 DEPDC5O75140 1603 aa22.11■■□□□ 1.13
PDZD3-210ENST00000529098 DNTTIP2Q5QJE6 756 aaKnown RBP22.11■■□□□ 1.13
PDZD3-210ENST00000529098 SSH1Q8WYL5 1049 aa22.11■■□□□ 1.13
PDZD3-210ENST00000529098 RAPGEF3O95398 923 aa22.1■■□□□ 1.13
PDZD3-210ENST00000529098 PTMAP06454 111 aaKnown RBP22.1■■□□□ 1.13
PDZD3-210ENST00000529098 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.1■■□□□ 1.13
PDZD3-210ENST00000529098 NOB1Q9ULX3 412 aaKnown RBP22.1■■□□□ 1.13
PDZD3-210ENST00000529098 SPHKAPQ2M3C7 1700 aa22.09■■□□□ 1.13
PDZD3-210ENST00000529098 SYCE3A1L190 88 aa22.09■■□□□ 1.13
PDZD3-210ENST00000529098 TMEM63CQ9P1W3 806 aa22.09■■□□□ 1.13
PDZD3-210ENST00000529098 POGZQ7Z3K3 1410 aa22.09■■□□□ 1.13
PDZD3-210ENST00000529098 EXOSC9Q06265 439 aaKnown RBP22.08■■□□□ 1.12
PDZD3-210ENST00000529098 GCC1Q96CN9 775 aa22.08■■□□□ 1.12
PDZD3-210ENST00000529098 MROH1Q8NDA8 1641 aa22.07■■□□□ 1.12
PDZD3-210ENST00000529098 CDC45O75419 566 aa22.07■■□□□ 1.12
PDZD3-210ENST00000529098 GTF2E1P29083 439 aaPredicted RBP22.07■■□□□ 1.12
PDZD3-210ENST00000529098 IPO8O15397 1037 aaKnown RBP22.07■■□□□ 1.12
PDZD3-210ENST00000529098 CFAP53Q96M91 514 aa22.07■■□□□ 1.12
PDZD3-210ENST00000529098 MBD3O95983 291 aa22.06■■□□□ 1.12
PDZD3-210ENST00000529098 NOS1P29475 1434 aa22.06■■□□□ 1.12
PDZD3-210ENST00000529098 PKP1Q13835 747 aa22.06■■□□□ 1.12
PDZD3-210ENST00000529098 ATP2B3Q16720 1220 aa22.06■■□□□ 1.12
PDZD3-210ENST00000529098 TAF3Q5VWG9 929 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms