RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 PAK3O75914 559 aaPredicted RBP22.69■■□□□ 1.22
CTSB-215ENST00000528965 A0A0G2JS52 829 aa22.68■■□□□ 1.22
CTSB-215ENST00000528965 MYT1Q01538 1121 aa22.68■■□□□ 1.22
CTSB-215ENST00000528965 NUDT16Q96DE0 195 aaKnown RBP22.68■■□□□ 1.22
CTSB-215ENST00000528965 BRWD3Q6RI45 1802 aa22.68■■□□□ 1.22
CTSB-215ENST00000528965 ONECUT3O60422 494 aaPredicted RBP22.67■■□□□ 1.22
CTSB-215ENST00000528965 BTG4Q9NY30 223 aa22.67■■□□□ 1.22
CTSB-215ENST00000528965 KRT27Q7Z3Y8 459 aa22.66■■□□□ 1.22
CTSB-215ENST00000528965 PRDM11Q9NQV5 511 aa22.65■■□□□ 1.22
CTSB-215ENST00000528965 CRYBG1Q9Y4K1 1723 aa22.65■■□□□ 1.22
CTSB-215ENST00000528965 CDK19Q9BWU1 502 aa22.64■■□□□ 1.21
CTSB-215ENST00000528965 TOPAZ1Q8N9V7 1692 aa22.63■■□□□ 1.21
CTSB-215ENST00000528965 POLR3AO14802 1390 aaPredicted RBP22.62■■□□□ 1.21
CTSB-215ENST00000528965 FAM98CQ17RN3 349 aaKnown RBP22.61■■□□□ 1.21
CTSB-215ENST00000528965 CCDC61Q9Y6R9 512 aa22.61■■□□□ 1.21
CTSB-215ENST00000528965 PHRF1Q9P1Y6 1649 aaKnown RBP22.59■■□□□ 1.21
CTSB-215ENST00000528965 ACEP12821 1306 aa22.58■■□□□ 1.21
CTSB-215ENST00000528965 SPATA31A5Q5VU36 1347 aa22.58■■□□□ 1.21
CTSB-215ENST00000528965 SPATA31A7Q8IWB4 1347 aa22.58■■□□□ 1.21
CTSB-215ENST00000528965 KIAA0232Q92628 1395 aa22.58■■□□□ 1.21
CTSB-215ENST00000528965 CENPJQ9HC77 1338 aaPredicted RBP22.57■■□□□ 1.2
CTSB-215ENST00000528965 PLEKHG3A1L390 1219 aa22.56■■□□□ 1.2
CTSB-215ENST00000528965 DEFB132Q7Z7B7 95 aa22.56■■□□□ 1.2
CTSB-215ENST00000528965 BAG6P46379 1132 aa22.55■■□□□ 1.2
CTSB-215ENST00000528965 SRPK2P78362 688 aaKnown RBP22.55■■□□□ 1.2
CTSB-215ENST00000528965 NBPF8Q3BBV2 869 aa22.55■■□□□ 1.2
CTSB-215ENST00000528965 NBPF1Q3BBV0 1214 aa22.54■■□□□ 1.2
CTSB-215ENST00000528965 THSD7AQ9UPZ6 1657 aa22.54■■□□□ 1.2
CTSB-215ENST00000528965 PPIP5K1Q6PFW1 1433 aa22.52■■□□□ 1.2
CTSB-215ENST00000528965 NUTM2GQ5VZR2 741 aa22.52■■□□□ 1.2
CTSB-215ENST00000528965 BRD4O60885 1362 aaPredicted RBP22.51■■□□□ 1.19
CTSB-215ENST00000528965 NRKQ7Z2Y5 1582 aa22.51■■□□□ 1.19
CTSB-215ENST00000528965 CHRNA2Q15822 529 aa22.51■■□□□ 1.19
CTSB-215ENST00000528965 ABTB2Q8N961 1025 aa22.51■■□□□ 1.19
CTSB-215ENST00000528965 QRICH2Q9H0J4 1663 aa22.51■■□□□ 1.19
CTSB-215ENST00000528965 SPATA31A1Q5TZJ5 1347 aa22.51■■□□□ 1.19
CTSB-215ENST00000528965 RGPD1P0DJD0 1748 aa22.51■■□□□ 1.19
CTSB-215ENST00000528965 ZC3H6P61129 1189 aaKnown RBP22.5■■□□□ 1.19
CTSB-215ENST00000528965 STRN4Q9NRL3 753 aa22.5■■□□□ 1.19
CTSB-215ENST00000528965 SRCAPQ6ZRS2 3230 aa22.49■■□□□ 1.19
CTSB-215ENST00000528965 USP19O94966 1318 aa22.49■■□□□ 1.19
CTSB-215ENST00000528965 CPDO75976 1380 aa22.49■■□□□ 1.19
CTSB-215ENST00000528965 EVA1CP58658 441 aa22.47■■□□□ 1.19
CTSB-215ENST00000528965 NLRP13Q86W25 1043 aa22.47■■□□□ 1.19
CTSB-215ENST00000528965 SSH2Q76I76 1423 aa22.47■■□□□ 1.19
CTSB-215ENST00000528965 CABP2Q9NPB3 220 aa22.46■■□□□ 1.19
CTSB-215ENST00000528965 L3MBTL2Q969R5 705 aa22.45■■□□□ 1.18
CTSB-215ENST00000528965 DISP2A7MBM2 1401 aa22.45■■□□□ 1.18
CTSB-215ENST00000528965 USP6P35125 1406 aa22.43■■□□□ 1.18
CTSB-215ENST00000528965 EVC2Q86UK5 1308 aa22.43■■□□□ 1.18
CTSB-215ENST00000528965 LMO7Q8WWI1 1683 aa22.42■■□□□ 1.18
CTSB-215ENST00000528965 TRPM1Q7Z4N2 1603 aa22.42■■□□□ 1.18
CTSB-215ENST00000528965 ROCK2O75116 1388 aaKnown RBP22.42■■□□□ 1.18
CTSB-215ENST00000528965 FAM182BQ5T319 152 aa22.42■■□□□ 1.18
CTSB-215ENST00000528965 FAM196AQ6ZSG2 479 aa22.42■■□□□ 1.18
CTSB-215ENST00000528965 BARGINQ6ZT62 677 aa22.42■■□□□ 1.18
CTSB-215ENST00000528965 USP35Q9P2H5 1018 aa22.42■■□□□ 1.18
CTSB-215ENST00000528965 GCP02774 474 aa22.41■■□□□ 1.18
CTSB-215ENST00000528965 CAMTA1Q9Y6Y1 1673 aa22.41■■□□□ 1.18
CTSB-215ENST00000528965 LRP5O75197 1615 aa22.41■■□□□ 1.18
CTSB-215ENST00000528965 TNS1Q9HBL0 1735 aaKnown RBP22.4■■□□□ 1.18
CTSB-215ENST00000528965 TCP11L2Q8N4U5 519 aa22.4■■□□□ 1.18
CTSB-215ENST00000528965 CABP1Q9NZU7 370 aa22.4■■□□□ 1.18
CTSB-215ENST00000528965 EN1Q05925 392 aaPredicted RBP22.39■■□□□ 1.17
CTSB-215ENST00000528965 PDE3BQ13370 1112 aa22.39■■□□□ 1.17
CTSB-215ENST00000528965 THRAP3Q9Y2W1 955 aaKnown RBP22.39■■□□□ 1.17
CTSB-215ENST00000528965 LARP1Q6PKG0 1096 aaKnown RBP22.38■■□□□ 1.17
CTSB-215ENST00000528965 SLIT3O75094 1523 aa22.37■■□□□ 1.17
CTSB-215ENST00000528965 COL5A2P05997 1499 aaPredicted RBP22.37■■□□□ 1.17
CTSB-215ENST00000528965 NLRP6P59044 892 aa22.37■■□□□ 1.17
CTSB-215ENST00000528965 PARD3Q8TEW0 1356 aa22.37■■□□□ 1.17
CTSB-215ENST00000528965 PSDA5PKW4 1024 aaPredicted RBP22.35■■□□□ 1.17
CTSB-215ENST00000528965 NEUROD1Q13562 356 aa22.35■■□□□ 1.17
CTSB-215ENST00000528965 SIN3AQ96ST3 1273 aa22.35■■□□□ 1.17
CTSB-215ENST00000528965 CRB1P82279 1406 aa22.34■■□□□ 1.17
CTSB-215ENST00000528965 ZBTB7CA1YPR0 619 aa22.34■■□□□ 1.17
CTSB-215ENST00000528965 TRIM37O94972 964 aa22.34■■□□□ 1.17
CTSB-215ENST00000528965 AATKQ6ZMQ8 1374 aa22.34■■□□□ 1.17
CTSB-215ENST00000528965 C11orf95C9JLR9 678 aaPredicted RBP22.33■■□□□ 1.17
CTSB-215ENST00000528965 ZNF692Q9BU19 519 aaPredicted RBP22.33■■□□□ 1.17
CTSB-215ENST00000528965 PIK3C2AO00443 1686 aa22.32■■□□□ 1.16
CTSB-215ENST00000528965 PARP4Q9UKK3 1724 aaKnown RBP22.31■■□□□ 1.16
CTSB-215ENST00000528965 APBA3O96018 575 aa22.31■■□□□ 1.16
CTSB-215ENST00000528965 EZH2Q15910 746 aaKnown RBP22.3■■□□□ 1.16
CTSB-215ENST00000528965 TTC21AQ8NDW8 1320 aa22.3■■□□□ 1.16
CTSB-215ENST00000528965 CAMKK2Q96RR4 588 aa22.29■■□□□ 1.16
CTSB-215ENST00000528965 CPSF1Q10570 1443 aaKnown RBP22.29■■□□□ 1.16
CTSB-215ENST00000528965 R3HDM1Q15032 1099 aaKnown RBP22.28■■□□□ 1.16
CTSB-215ENST00000528965 KCNH5Q8NCM2 988 aa22.28■■□□□ 1.16
CTSB-215ENST00000528965 TTC21BQ7Z4L5 1316 aa22.28■■□□□ 1.16
CTSB-215ENST00000528965 AKAP12Q02952 1782 aa22.27■■□□□ 1.16
CTSB-215ENST00000528965 SBNO2Q9Y2G9 1366 aa22.27■■□□□ 1.16
CTSB-215ENST00000528965 OVOS2A0A0G2JMS6 1433 aa22.27■■□□□ 1.16
CTSB-215ENST00000528965 OVOS2A0A0J9YW53 1432 aa22.27■■□□□ 1.16
CTSB-215ENST00000528965 OVOS2Q6IE36 1432 aa22.27■■□□□ 1.16
CTSB-215ENST00000528965 TOM1L2Q6ZVM7 507 aa22.27■■□□□ 1.16
CTSB-215ENST00000528965 WDR17Q8IZU2 1322 aa22.25■■□□□ 1.15
CTSB-215ENST00000528965 KTN1Q86UP2 1357 aaKnown RBP22.25■■□□□ 1.15
CTSB-215ENST00000528965 RREB1Q92766 1687 aa22.24■■□□□ 1.15
CTSB-215ENST00000528965 LRRC37A3O60309 1634 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms