RNA–Protein interactions for RNA: ENST00000528948.1

CAPRIN1-206, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-206ENST00000528948 KIF20AO95235 890 aa11.39□□□□□ -0.59
CAPRIN1-206ENST00000528948 RBM10P98175 930 aaKnown RBP11.39□□□□□ -0.59
CAPRIN1-206ENST00000528948 POTEBQ6S5H4 581 aa11.39□□□□□ -0.59
CAPRIN1-206ENST00000528948 KIAA1211Q6ZU35 1233 aa11.39□□□□□ -0.59
CAPRIN1-206ENST00000528948 P3H3Q8IVL6 736 aa11.39□□□□□ -0.59
CAPRIN1-206ENST00000528948 LHX6Q9UPM6 363 aa11.39□□□□□ -0.59
CAPRIN1-206ENST00000528948 KDM6BO15054 1643 aa11.38□□□□□ -0.59
CAPRIN1-206ENST00000528948 NESP48681 1621 aa11.38□□□□□ -0.59
CAPRIN1-206ENST00000528948 CARD11Q9BXL7 1154 aa11.38□□□□□ -0.59
CAPRIN1-206ENST00000528948 GTPBP4Q9BZE4 634 aaKnown RBP11.38□□□□□ -0.59
CAPRIN1-206ENST00000528948 KDM5DQ9BY66 1539 aa11.38□□□□□ -0.59
CAPRIN1-206ENST00000528948 PZPP20742 1482 aa11.38□□□□□ -0.59
CAPRIN1-206ENST00000528948 NKTRP30414 1462 aaKnown RBP11.38□□□□□ -0.59
CAPRIN1-206ENST00000528948 NLRP1Q9C000 1473 aa11.38□□□□□ -0.59
CAPRIN1-206ENST00000528948 USP19O94966 1318 aa11.37□□□□□ -0.59
CAPRIN1-206ENST00000528948 POLA1P09884 1462 aaPredicted RBP11.37□□□□□ -0.59
CAPRIN1-206ENST00000528948 EIF2AK4Q9P2K8 1649 aaKnown RBP11.36□□□□□ -0.59
CAPRIN1-206ENST00000528948 SPDYE16A6NNV3 312 aaPredicted RBP11.36□□□□□ -0.59
CAPRIN1-206ENST00000528948 DPYSL4O14531 572 aa11.36□□□□□ -0.59
CAPRIN1-206ENST00000528948 ZNF500O60304 480 aaPredicted RBP11.36□□□□□ -0.59
CAPRIN1-206ENST00000528948 HSCBQ8IWL3 235 aa11.36□□□□□ -0.59
CAPRIN1-206ENST00000528948 ZNF687Q8N1G0 1237 aa11.36□□□□□ -0.59
CAPRIN1-206ENST00000528948 KRTAP3-3Q9BYR6 98 aa11.36□□□□□ -0.59
CAPRIN1-206ENST00000528948 KRTAP3-2Q9BYR7 98 aa11.36□□□□□ -0.59
CAPRIN1-206ENST00000528948 CADPSQ9ULU8 1353 aa11.36□□□□□ -0.59
CAPRIN1-206ENST00000528948 ITSN2Q9NZM3 1697 aa11.36□□□□□ -0.59
CAPRIN1-206ENST00000528948 ABCC2Q92887 1545 aa11.35□□□□□ -0.59
CAPRIN1-206ENST00000528948 ZNF608Q9ULD9 1512 aaPredicted RBP11.35□□□□□ -0.59
CAPRIN1-206ENST00000528948 DUSP27Q5VZP5 1158 aa11.35□□□□□ -0.59
CAPRIN1-206ENST00000528948 COL17A1Q9UMD9 1497 aaPredicted RBP11.34□□□□□ -0.59
CAPRIN1-206ENST00000528948 NPC1L1Q9UHC9 1359 aa11.34□□□□□ -0.59
CAPRIN1-206ENST00000528948 E9PSI1 815 aa11.34□□□□□ -0.59
CAPRIN1-206ENST00000528948 RGS3P49796 1198 aa11.34□□□□□ -0.59
CAPRIN1-206ENST00000528948 PPP4R3BQ5MIZ7 849 aa11.34□□□□□ -0.59
CAPRIN1-206ENST00000528948 SNX21Q969T3 373 aa11.34□□□□□ -0.59
CAPRIN1-206ENST00000528948 TBC1D2Q9BYX2 928 aa11.34□□□□□ -0.59
CAPRIN1-206ENST00000528948 SLKQ9H2G2 1235 aaPredicted RBP11.34□□□□□ -0.59
CAPRIN1-206ENST00000528948 ABCC5O15440 1437 aa11.34□□□□□ -0.59
CAPRIN1-206ENST00000528948 ARHGAP31Q2M1Z3 1444 aa11.34□□□□□ -0.59
CAPRIN1-206ENST00000528948 NCOA3Q9Y6Q9 1424 aa11.34□□□□□ -0.59
CAPRIN1-206ENST00000528948 ZNF521Q96K83 1311 aa11.34□□□□□ -0.59
CAPRIN1-206ENST00000528948 CEP170Q5SW79 1584 aa11.33□□□□□ -0.6
CAPRIN1-206ENST00000528948 GPRASP1Q5JY77 1395 aa11.33□□□□□ -0.6
CAPRIN1-206ENST00000528948 LETM1O95202 739 aaPredicted RBP11.33□□□□□ -0.6
CAPRIN1-206ENST00000528948 WDR43Q15061 677 aaKnown RBP eCLIP11.33□□□□□ -0.6
CAPRIN1-206ENST00000528948 TRMT2AQ8IZ69 625 aaKnown RBP11.33□□□□□ -0.6
CAPRIN1-206ENST00000528948 ARHGEF1Q92888 912 aaKnown RBP11.33□□□□□ -0.6
CAPRIN1-206ENST00000528948 PIK3C2GO75747 1445 aa11.33□□□□□ -0.6
CAPRIN1-206ENST00000528948 NUP160Q12769 1436 aa11.33□□□□□ -0.6
CAPRIN1-206ENST00000528948 YEATS2Q9ULM3 1422 aa11.33□□□□□ -0.6
CAPRIN1-206ENST00000528948 PLIN1O60240 522 aa11.32□□□□□ -0.6
CAPRIN1-206ENST00000528948 PBX2P40425 430 aa11.32□□□□□ -0.6
CAPRIN1-206ENST00000528948 RBM25P49756 843 aaKnown RBP11.32□□□□□ -0.6
CAPRIN1-206ENST00000528948 HMGN5P82970 282 aaKnown RBP11.32□□□□□ -0.6
CAPRIN1-206ENST00000528948 DMTNQ08495 405 aa11.32□□□□□ -0.6
CAPRIN1-206ENST00000528948 PDIA6Q15084 440 aa11.32□□□□□ -0.6
CAPRIN1-206ENST00000528948 CLUAP1Q96AJ1 413 aa11.32□□□□□ -0.6
CAPRIN1-206ENST00000528948 POLR3GLQ9BT43 218 aa11.32□□□□□ -0.6
CAPRIN1-206ENST00000528948 SHANK2Q9UPX8 1470 aa11.32□□□□□ -0.6
CAPRIN1-206ENST00000528948 SLFN5Q08AF3 891 aa11.31□□□□□ -0.6
CAPRIN1-206ENST00000528948 CNGB1Q14028 1251 aaPredicted RBP11.31□□□□□ -0.6
CAPRIN1-206ENST00000528948 CDCA8Q53HL2 280 aa11.31□□□□□ -0.6
CAPRIN1-206ENST00000528948 CLEC17AQ6ZS10 378 aa11.31□□□□□ -0.6
CAPRIN1-206ENST00000528948 CDCA7LQ96GN5 454 aa11.31□□□□□ -0.6
CAPRIN1-206ENST00000528948 JPH4Q96JJ6 628 aa11.31□□□□□ -0.6
CAPRIN1-206ENST00000528948 RWDD1Q9H446 243 aaPredicted RBP11.31□□□□□ -0.6
CAPRIN1-206ENST00000528948 PER1O15534 1290 aaPredicted RBP11.3□□□□□ -0.6
CAPRIN1-206ENST00000528948 PDE4CQ08493 712 aa11.3□□□□□ -0.6
CAPRIN1-206ENST00000528948 SASS6Q6UVJ0 657 aa11.3□□□□□ -0.6
CAPRIN1-206ENST00000528948 SMC5Q8IY18 1101 aa11.3□□□□□ -0.6
CAPRIN1-206ENST00000528948 CCDC94Q9BW85 323 aaPredicted RBP11.3□□□□□ -0.6
CAPRIN1-206ENST00000528948 PANK2Q9BZ23 570 aa11.3□□□□□ -0.6
CAPRIN1-206ENST00000528948 NOL7Q9UMY1 257 aaKnown RBP11.3□□□□□ -0.6
CAPRIN1-206ENST00000528948 KIF16BQ96L93 1317 aa11.3□□□□□ -0.6
CAPRIN1-206ENST00000528948 CROCC2H7BZ55 1655 aa11.3□□□□□ -0.6
CAPRIN1-206ENST00000528948 MAGI3Q5TCQ9 1506 aa11.3□□□□□ -0.6
CAPRIN1-206ENST00000528948 EIF4G3O43432 1585 aaKnown RBP11.29□□□□□ -0.6
CAPRIN1-206ENST00000528948 PTGER2P43116 358 aa11.29□□□□□ -0.6
CAPRIN1-206ENST00000528948 NASPP49321 788 aaPredicted RBP11.29□□□□□ -0.6
CAPRIN1-206ENST00000528948 CHIC2Q9UKJ5 165 aa11.29□□□□□ -0.6
CAPRIN1-206ENST00000528948 TRPM1Q7Z4N2 1603 aa11.28□□□□□ -0.6
CAPRIN1-206ENST00000528948 PTPRGP23470 1445 aa11.28□□□□□ -0.6
CAPRIN1-206ENST00000528948 FOSBP53539 338 aa11.28□□□□□ -0.6
CAPRIN1-206ENST00000528948 ZNF454Q8N9F8 522 aa11.28□□□□□ -0.6
CAPRIN1-206ENST00000528948 PRIMPOLQ96LW4 560 aa11.28□□□□□ -0.6
CAPRIN1-206ENST00000528948 CCDC39Q9UFE4 941 aa11.28□□□□□ -0.6
CAPRIN1-206ENST00000528948 WDR62O43379 1518 aa11.28□□□□□ -0.6
CAPRIN1-206ENST00000528948 PRDM15P57071 1507 aaPredicted RBP11.27□□□□□ -0.61
CAPRIN1-206ENST00000528948 ST20-MTHFSA0A0A6YYL1 179 aa11.27□□□□□ -0.61
CAPRIN1-206ENST00000528948 PHF14O94880 888 aa11.27□□□□□ -0.61
CAPRIN1-206ENST00000528948 ZNF445P59923 1031 aa11.27□□□□□ -0.61
CAPRIN1-206ENST00000528948 KLHL40Q2TBA0 621 aa11.27□□□□□ -0.61
CAPRIN1-206ENST00000528948 KCNV2Q8TDN2 545 aa11.27□□□□□ -0.61
CAPRIN1-206ENST00000528948 STAC3Q96MF2 364 aa11.27□□□□□ -0.61
CAPRIN1-206ENST00000528948 C22orf23Q9BZE7 217 aa11.27□□□□□ -0.61
CAPRIN1-206ENST00000528948 REREQ9P2R6 1566 aa11.27□□□□□ -0.61
CAPRIN1-206ENST00000528948 CANXP27824 592 aaKnown RBP11.26□□□□□ -0.61
CAPRIN1-206ENST00000528948 TMF1P82094 1093 aa11.26□□□□□ -0.61
CAPRIN1-206ENST00000528948 EPAS1Q99814 870 aa11.26□□□□□ -0.61
CAPRIN1-206ENST00000528948 CT47B1P0C2W7 299 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms