RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 KRT28Q7Z3Y7 464 aa19.97■□□□□ 0.79
UBXN1-209ENST00000528907 TMC1Q8TDI8 760 aa19.97■□□□□ 0.79
UBXN1-209ENST00000528907 HDGFL2Q7Z4V5 671 aaPredicted RBP19.96■□□□□ 0.79
UBXN1-209ENST00000528907 A0A1W2PP64 1363 aa19.95■□□□□ 0.79
UBXN1-209ENST00000528907 SHPRHQ149N8 1683 aa19.95■□□□□ 0.78
UBXN1-209ENST00000528907 DDX17Q92841 729 aaKnown RBP19.95■□□□□ 0.78
UBXN1-209ENST00000528907 COL22A1Q8NFW1 1626 aaPredicted RBP19.94■□□□□ 0.78
UBXN1-209ENST00000528907 LRRC59Q96AG4 307 aaKnown RBP19.94■□□□□ 0.78
UBXN1-209ENST00000528907 KTN1Q86UP2 1357 aaKnown RBP19.94■□□□□ 0.78
UBXN1-209ENST00000528907 TNS3Q68CZ2 1445 aa19.93■□□□□ 0.78
UBXN1-209ENST00000528907 EDC4Q6P2E9 1401 aaKnown RBP19.93■□□□□ 0.78
UBXN1-209ENST00000528907 SPATA31A3Q5VYP0 1347 aa19.93■□□□□ 0.78
UBXN1-209ENST00000528907 USP54Q70EL1 1684 aa19.93■□□□□ 0.78
UBXN1-209ENST00000528907 TTC21AQ8NDW8 1320 aa19.91■□□□□ 0.78
UBXN1-209ENST00000528907 ARHGEF10O15013 1369 aa19.9■□□□□ 0.78
UBXN1-209ENST00000528907 PIK3C2AO00443 1686 aa19.89■□□□□ 0.77
UBXN1-209ENST00000528907 TTC21BQ7Z4L5 1316 aa19.89■□□□□ 0.77
UBXN1-209ENST00000528907 POLR3GLQ9BT43 218 aa19.89■□□□□ 0.77
UBXN1-209ENST00000528907 JCADQ9P266 1359 aa19.89■□□□□ 0.77
UBXN1-209ENST00000528907 ZNF316A6NFI3 1004 aaPredicted RBP19.88■□□□□ 0.77
UBXN1-209ENST00000528907 XPCQ01831 940 aaPredicted RBP19.88■□□□□ 0.77
UBXN1-209ENST00000528907 CRYBG1Q9Y4K1 1723 aa19.88■□□□□ 0.77
UBXN1-209ENST00000528907 PNPLA6Q8IY17 1366 aa19.87■□□□□ 0.77
UBXN1-209ENST00000528907 CARD14Q9BXL6 1004 aa19.87■□□□□ 0.77
UBXN1-209ENST00000528907 USP31Q70CQ4 1352 aa19.86■□□□□ 0.77
UBXN1-209ENST00000528907 PANK3Q9H999 370 aa19.86■□□□□ 0.77
UBXN1-209ENST00000528907 KIF20BQ96Q89 1820 aa19.86■□□□□ 0.77
UBXN1-209ENST00000528907 MARF1Q9Y4F3 1742 aaKnown RBP19.85■□□□□ 0.77
UBXN1-209ENST00000528907 ABCA3Q99758 1704 aa19.84■□□□□ 0.77
UBXN1-209ENST00000528907 NSD3Q9BZ95 1437 aa19.84■□□□□ 0.77
UBXN1-209ENST00000528907 SPATA31A6Q5VVP1 1343 aa19.83■□□□□ 0.77
UBXN1-209ENST00000528907 ANKRD26Q9UPS8 1709 aa19.82■□□□□ 0.76
UBXN1-209ENST00000528907 PER1O15534 1290 aaPredicted RBP19.82■□□□□ 0.76
UBXN1-209ENST00000528907 PAK3O75914 559 aaPredicted RBP19.82■□□□□ 0.76
UBXN1-209ENST00000528907 ABTB2Q8N961 1025 aa19.82■□□□□ 0.76
UBXN1-209ENST00000528907 PHRF1Q9P1Y6 1649 aaKnown RBP19.82■□□□□ 0.76
UBXN1-209ENST00000528907 SLIT3O75094 1523 aa19.81■□□□□ 0.76
UBXN1-209ENST00000528907 USP19O94966 1318 aa19.8■□□□□ 0.76
UBXN1-209ENST00000528907 OVOS2A0A0J9YW53 1432 aa19.8■□□□□ 0.76
UBXN1-209ENST00000528907 OVOS2Q6IE36 1432 aa19.8■□□□□ 0.76
UBXN1-209ENST00000528907 NLRP13Q86W25 1043 aa19.8■□□□□ 0.76
UBXN1-209ENST00000528907 UPF1Q92900 1129 aaKnown RBP eCLIP19.8■□□□□ 0.76
UBXN1-209ENST00000528907 NSD2O96028 1365 aa19.8■□□□□ 0.76
UBXN1-209ENST00000528907 NPC1L1Q9UHC9 1359 aa19.79■□□□□ 0.76
UBXN1-209ENST00000528907 CGNL1Q0VF96 1302 aa19.78■□□□□ 0.76
UBXN1-209ENST00000528907 FYB1O15117 783 aa19.78■□□□□ 0.76
UBXN1-209ENST00000528907 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.78■□□□□ 0.76
UBXN1-209ENST00000528907 NME9Q86XW9 330 aa19.77■□□□□ 0.76
UBXN1-209ENST00000528907 NLRP6P59044 892 aa19.76■□□□□ 0.75
UBXN1-209ENST00000528907 ZNF772Q68DY9 489 aaPredicted RBP19.76■□□□□ 0.75
UBXN1-209ENST00000528907 KNSTRNQ9Y448 316 aa19.76■□□□□ 0.75
UBXN1-209ENST00000528907 AMER1Q5JTC6 1135 aaPredicted RBP19.75■□□□□ 0.75
UBXN1-209ENST00000528907 LMOD2Q6P5Q4 547 aa19.75■□□□□ 0.75
UBXN1-209ENST00000528907 LRP6O75581 1613 aa19.74■□□□□ 0.75
UBXN1-209ENST00000528907 NFAT5O94916 1531 aa19.73■□□□□ 0.75
UBXN1-209ENST00000528907 KCNH5Q8NCM2 988 aa19.73■□□□□ 0.75
UBXN1-209ENST00000528907 MEX3CQ5U5Q3 659 aaKnown RBP19.72■□□□□ 0.75
UBXN1-209ENST00000528907 COG3Q96JB2 828 aa19.72■□□□□ 0.75
UBXN1-209ENST00000528907 DDX10Q13206 875 aaKnown RBP19.71■□□□□ 0.75
UBXN1-209ENST00000528907 NUTM2GQ5VZR2 741 aa19.71■□□□□ 0.75
UBXN1-209ENST00000528907 ZRANB1Q9UGI0 708 aa19.71■□□□□ 0.75
UBXN1-209ENST00000528907 CPDO75976 1380 aa19.7■□□□□ 0.74
UBXN1-209ENST00000528907 GCP02774 474 aa19.7■□□□□ 0.74
UBXN1-209ENST00000528907 GGNBP2Q9H3C7 697 aa19.7■□□□□ 0.74
UBXN1-209ENST00000528907 ABCC6O95255 1503 aa19.7■□□□□ 0.74
UBXN1-209ENST00000528907 CABLES1Q8TDN4 633 aa19.69■□□□□ 0.74
UBXN1-209ENST00000528907 AATKQ6ZMQ8 1374 aa19.68■□□□□ 0.74
UBXN1-209ENST00000528907 COL14A1Q05707 1796 aaKnown RBP19.67■□□□□ 0.74
UBXN1-209ENST00000528907 CDK12Q9NYV4 1490 aaPredicted RBP19.67■□□□□ 0.74
UBXN1-209ENST00000528907 LTN1O94822 1766 aa19.66■□□□□ 0.74
UBXN1-209ENST00000528907 RXRBP28702 533 aa19.66■□□□□ 0.74
UBXN1-209ENST00000528907 LMO7Q8WWI1 1683 aa19.65■□□□□ 0.74
UBXN1-209ENST00000528907 NWD2Q9ULI1 1742 aa19.65■□□□□ 0.74
UBXN1-209ENST00000528907 COL18A1P39060 1754 aa19.65■□□□□ 0.74
UBXN1-209ENST00000528907 HAP1P54257 671 aaPredicted RBP19.64■□□□□ 0.73
UBXN1-209ENST00000528907 ARHGEF25Q86VW2 580 aa19.64■□□□□ 0.73
UBXN1-209ENST00000528907 KIF24Q5T7B8 1368 aa19.64■□□□□ 0.73
UBXN1-209ENST00000528907 PLCH1Q4KWH8 1693 aa19.63■□□□□ 0.73
UBXN1-209ENST00000528907 KIAA0232Q92628 1395 aa19.63■□□□□ 0.73
UBXN1-209ENST00000528907 NUTM2BA6NNL0 878 aaPredicted RBP19.63■□□□□ 0.73
UBXN1-209ENST00000528907 NUTM2EB1AL46 878 aaPredicted RBP19.63■□□□□ 0.73
UBXN1-209ENST00000528907 NUTM2AQ8IVF1 878 aaPredicted RBP19.63■□□□□ 0.73
UBXN1-209ENST00000528907 MAP2P11137 1827 aaKnown RBP19.62■□□□□ 0.73
UBXN1-209ENST00000528907 SLIT2O94813 1529 aa19.62■□□□□ 0.73
UBXN1-209ENST00000528907 MORC1Q86VD1 984 aa19.62■□□□□ 0.73
UBXN1-209ENST00000528907 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.62■□□□□ 0.73
UBXN1-209ENST00000528907 SMG6Q86US8 1419 aaKnown RBP19.61■□□□□ 0.73
UBXN1-209ENST00000528907 RTL1A6NKG5 1358 aa19.6■□□□□ 0.73
UBXN1-209ENST00000528907 PARD3Q8TEW0 1356 aa19.6■□□□□ 0.73
UBXN1-209ENST00000528907 ZC3H6P61129 1189 aaKnown RBP19.6■□□□□ 0.73
UBXN1-209ENST00000528907 FNBP4Q8N3X1 1017 aaPredicted RBP19.6■□□□□ 0.73
UBXN1-209ENST00000528907 NRAPQ86VF7 1730 aa19.59■□□□□ 0.73
UBXN1-209ENST00000528907 FAM83GA6ND36 823 aa19.59■□□□□ 0.73
UBXN1-209ENST00000528907 ADAMTS2O95450 1211 aa19.59■□□□□ 0.73
UBXN1-209ENST00000528907 CC2D1BQ5T0F9 858 aaKnown RBP19.59■□□□□ 0.73
UBXN1-209ENST00000528907 PRDM11Q9NQV5 511 aa19.58■□□□□ 0.72
UBXN1-209ENST00000528907 BLMP54132 1417 aaPredicted RBP19.58■□□□□ 0.72
UBXN1-209ENST00000528907 MAP3K19Q56UN5 1328 aa19.57■□□□□ 0.72
UBXN1-209ENST00000528907 PEAK1Q9H792 1746 aa19.57■□□□□ 0.72
UBXN1-209ENST00000528907 CAMTA1Q9Y6Y1 1673 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms