RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 ERBINQ96RT1 1412 aa22.04■■□□□ 1.12
LTBP3-210ENST00000528516 OFD1O75665 1012 aa22.04■■□□□ 1.12
LTBP3-210ENST00000528516 AMPHP49418 695 aa22.04■■□□□ 1.12
LTBP3-210ENST00000528516 CHMP4BQ9H444 224 aaKnown RBP22.02■■□□□ 1.12
LTBP3-210ENST00000528516 ARHGEF5Q12774 1597 aa22.02■■□□□ 1.12
LTBP3-210ENST00000528516 RLBP1P12271 317 aa22.01■■□□□ 1.11
LTBP3-210ENST00000528516 TESK2Q96S53 571 aa22.01■■□□□ 1.11
LTBP3-210ENST00000528516 PRKAR2BP31323 418 aa22.01■■□□□ 1.11
LTBP3-210ENST00000528516 CAVIN1Q6NZI2 390 aaKnown RBP22.01■■□□□ 1.11
LTBP3-210ENST00000528516 PRAM1Q96QH2 718 aa22■■□□□ 1.11
LTBP3-210ENST00000528516 ZNF521Q96K83 1311 aa22■■□□□ 1.11
LTBP3-210ENST00000528516 STK31Q9BXU1 1019 aa22■■□□□ 1.11
LTBP3-210ENST00000528516 EIF2S2P20042 333 aaKnown RBP22■■□□□ 1.11
LTBP3-210ENST00000528516 AMER1Q5JTC6 1135 aaPredicted RBP22■■□□□ 1.11
LTBP3-210ENST00000528516 MCTP1Q6DN14 999 aa21.99■■□□□ 1.11
LTBP3-210ENST00000528516 WWC1Q8IX03 1113 aa21.99■■□□□ 1.11
LTBP3-210ENST00000528516 DDX19BQ9UMR2 479 aa21.98■■□□□ 1.11
LTBP3-210ENST00000528516 COG3Q96JB2 828 aa21.98■■□□□ 1.11
LTBP3-210ENST00000528516 ADGRF5Q8IZF2 1346 aa21.98■■□□□ 1.11
LTBP3-210ENST00000528516 NOB1Q9ULX3 412 aaKnown RBP21.98■■□□□ 1.11
LTBP3-210ENST00000528516 SSFA2P28290 1259 aa21.97■■□□□ 1.11
LTBP3-210ENST00000528516 RARSP54136 660 aaKnown RBP21.97■■□□□ 1.11
LTBP3-210ENST00000528516 CABP1Q9NZU7 370 aa21.97■■□□□ 1.11
LTBP3-210ENST00000528516 NGEFQ8N5V2 710 aa21.97■■□□□ 1.11
LTBP3-210ENST00000528516 DUOX2Q9NRD8 1548 aa21.96■■□□□ 1.11
LTBP3-210ENST00000528516 INSRP06213 1382 aa21.96■■□□□ 1.11
LTBP3-210ENST00000528516 CROCC2H7BZ55 1655 aa21.95■■□□□ 1.11
LTBP3-210ENST00000528516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.95■■□□□ 1.1
LTBP3-210ENST00000528516 NINLQ9Y2I6 1382 aa21.93■■□□□ 1.1
LTBP3-210ENST00000528516 CIZ1Q9ULV3 898 aaPredicted RBP21.93■■□□□ 1.1
LTBP3-210ENST00000528516 TXNDC2Q86VQ3 553 aa21.92■■□□□ 1.1
LTBP3-210ENST00000528516 CHMP3Q9Y3E7 222 aa21.92■■□□□ 1.1
LTBP3-210ENST00000528516 DCTN1Q14203 1278 aa21.92■■□□□ 1.1
LTBP3-210ENST00000528516 ABCC1P33527 1531 aa21.91■■□□□ 1.1
LTBP3-210ENST00000528516 MTERF4Q7Z6M4 381 aaKnown RBP21.91■■□□□ 1.1
LTBP3-210ENST00000528516 RNF214Q8ND24 703 aa21.91■■□□□ 1.1
LTBP3-210ENST00000528516 RRS1Q15050 365 aaKnown RBP21.91■■□□□ 1.1
LTBP3-210ENST00000528516 TRMT2AQ8IZ69 625 aaKnown RBP21.91■■□□□ 1.1
LTBP3-210ENST00000528516 MPNDQ8N594 471 aa21.91■■□□□ 1.1
LTBP3-210ENST00000528516 GOLGA6L4A6NEF3 574 aa21.91■■□□□ 1.1
LTBP3-210ENST00000528516 CSPP1Q1MSJ5 1256 aa21.91■■□□□ 1.1
LTBP3-210ENST00000528516 AAMPQ13685 434 aa21.9■■□□□ 1.1
LTBP3-210ENST00000528516 MVPQ14764 893 aaKnown RBP21.9■■□□□ 1.1
LTBP3-210ENST00000528516 RAB3GAP1Q15042 981 aa21.89■■□□□ 1.09
LTBP3-210ENST00000528516 COL17A1Q9UMD9 1497 aaPredicted RBP21.89■■□□□ 1.09
LTBP3-210ENST00000528516 PRDM4Q9UKN5 801 aa21.89■■□□□ 1.09
LTBP3-210ENST00000528516 PRAG1Q86YV5 1406 aa21.88■■□□□ 1.09
LTBP3-210ENST00000528516 MCCP23508 829 aa21.88■■□□□ 1.09
LTBP3-210ENST00000528516 MIS18AQ9NYP9 233 aa21.87■■□□□ 1.09
LTBP3-210ENST00000528516 K7ELQ4 463 aaPredicted RBP21.87■■□□□ 1.09
LTBP3-210ENST00000528516 FKBP5Q13451 457 aaPredicted RBP21.87■■□□□ 1.09
LTBP3-210ENST00000528516 NLRP1Q9C000 1473 aa21.87■■□□□ 1.09
LTBP3-210ENST00000528516 WAPLQ7Z5K2 1190 aa21.87■■□□□ 1.09
LTBP3-210ENST00000528516 HDGFP51858 240 aaKnown RBP21.87■■□□□ 1.09
LTBP3-210ENST00000528516 PPP1R9BQ96SB3 815 aa21.87■■□□□ 1.09
LTBP3-210ENST00000528516 RBM42Q9BTD8 480 aaKnown RBP21.86■■□□□ 1.09
LTBP3-210ENST00000528516 SMC5Q8IY18 1101 aa21.85■■□□□ 1.09
LTBP3-210ENST00000528516 SMAP1Q8IYB5 467 aaPredicted RBP21.85■■□□□ 1.09
LTBP3-210ENST00000528516 ANO2Q9NQ90 1003 aa21.85■■□□□ 1.09
LTBP3-210ENST00000528516 CSB-PGBD3P0DP91 1061 aa21.85■■□□□ 1.09
LTBP3-210ENST00000528516 CBX1P83916 185 aa21.85■■□□□ 1.09
LTBP3-210ENST00000528516 ATP7AQ04656 1500 aa21.84■■□□□ 1.09
LTBP3-210ENST00000528516 PRPF40AO75400 957 aaKnown RBP21.84■■□□□ 1.09
LTBP3-210ENST00000528516 BAG4O95429 457 aaKnown RBP21.84■■□□□ 1.09
LTBP3-210ENST00000528516 KLHL40Q2TBA0 621 aa21.84■■□□□ 1.09
LTBP3-210ENST00000528516 BCL11BQ9C0K0 894 aaPredicted RBP21.84■■□□□ 1.09
LTBP3-210ENST00000528516 HMMRO75330 724 aa21.84■■□□□ 1.09
LTBP3-210ENST00000528516 TMEM57Q8N5G2 664 aa21.84■■□□□ 1.09
LTBP3-210ENST00000528516 PLA2R1Q13018 1463 aa21.83■■□□□ 1.09
LTBP3-210ENST00000528516 RTEL1-TNFRSF6BF6WH68 1400 aa21.83■■□□□ 1.09
LTBP3-210ENST00000528516 DYNC1I1O14576 645 aa21.83■■□□□ 1.09
LTBP3-210ENST00000528516 SSH1Q8WYL5 1049 aa21.83■■□□□ 1.09
LTBP3-210ENST00000528516 CFAP65Q6ZU64 1925 aaKnown RBP21.83■■□□□ 1.08
LTBP3-210ENST00000528516 ZNF518AQ6AHZ1 1483 aa21.82■■□□□ 1.08
LTBP3-210ENST00000528516 ZNF692Q9BU19 519 aaPredicted RBP21.82■■□□□ 1.08
LTBP3-210ENST00000528516 SASS6Q6UVJ0 657 aa21.82■■□□□ 1.08
LTBP3-210ENST00000528516 CDK19Q9BWU1 502 aa21.82■■□□□ 1.08
LTBP3-210ENST00000528516 ZRSR1Q15695 479 aaKnown RBP21.81■■□□□ 1.08
LTBP3-210ENST00000528516 DRC7Q8IY82 874 aa21.81■■□□□ 1.08
LTBP3-210ENST00000528516 RBM27Q9P2N5 1060 aaKnown RBP21.81■■□□□ 1.08
LTBP3-210ENST00000528516 NSD3Q9BZ95 1437 aa21.81■■□□□ 1.08
LTBP3-210ENST00000528516 SULT6B1Q6IMI4 303 aa21.81■■□□□ 1.08
LTBP3-210ENST00000528516 CCDC39Q9UFE4 941 aa21.81■■□□□ 1.08
LTBP3-210ENST00000528516 A2MP01023 1474 aa21.8■■□□□ 1.08
LTBP3-210ENST00000528516 ZSCAN23Q3MJ62 389 aa21.8■■□□□ 1.08
LTBP3-210ENST00000528516 ATF7IPQ6VMQ6 1270 aa21.8■■□□□ 1.08
LTBP3-210ENST00000528516 GAS2L2Q8NHY3 880 aa21.8■■□□□ 1.08
LTBP3-210ENST00000528516 ST18O60284 1047 aa21.8■■□□□ 1.08
LTBP3-210ENST00000528516 SNX21Q969T3 373 aa21.8■■□□□ 1.08
LTBP3-210ENST00000528516 NOL7Q9UMY1 257 aaKnown RBP21.8■■□□□ 1.08
LTBP3-210ENST00000528516 KIAA2012Q0VF49 1180 aa21.79■■□□□ 1.08
LTBP3-210ENST00000528516 RBSNQ9H1K0 784 aa21.79■■□□□ 1.08
LTBP3-210ENST00000528516 TERF1P54274 439 aa21.79■■□□□ 1.08
LTBP3-210ENST00000528516 TWISTNBQ3B726 338 aaPredicted RBP21.79■■□□□ 1.08
LTBP3-210ENST00000528516 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.79■■□□□ 1.08
LTBP3-210ENST00000528516 TSPYL4Q9UJ04 414 aa21.79■■□□□ 1.08
LTBP3-210ENST00000528516 PRIM1P49642 420 aaKnown RBP21.79■■□□□ 1.08
LTBP3-210ENST00000528516 LMOD3Q0VAK6 560 aa21.79■■□□□ 1.08
LTBP3-210ENST00000528516 SLC26A8Q96RN1 970 aa21.79■■□□□ 1.08
LTBP3-210ENST00000528516 ZKSCAN5Q9Y2L8 839 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms