RNA–Protein interactions for RNA: ENST00000528248.1

PKD2L1-203, Transcript of polycystin 2 like 1, transient receptor potential cation channel, humanhuman

TSL 1 (best)

Gene PKD2L1, Length 2,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2L1-203ENST00000528248 MVPQ14764 893 aaKnown RBP19.35■□□□□ 0.69
PKD2L1-203ENST00000528248 IL16Q14005 1332 aa19.34■□□□□ 0.69
PKD2L1-203ENST00000528248 USP19O94966 1318 aa19.34■□□□□ 0.69
PKD2L1-203ENST00000528248 PNNQ9H307 717 aaKnown RBP19.34■□□□□ 0.69
PKD2L1-203ENST00000528248 TRIM35Q9UPQ4 493 aa19.34■□□□□ 0.69
PKD2L1-203ENST00000528248 NFKBIBQ15653 356 aa19.33■□□□□ 0.68
PKD2L1-203ENST00000528248 FBXO31Q5XUX0 539 aaPredicted RBP19.33■□□□□ 0.68
PKD2L1-203ENST00000528248 ARHGEF40Q8TER5 1519 aa19.33■□□□□ 0.68
PKD2L1-203ENST00000528248 DZIP1LQ8IYY4 767 aaKnown RBP19.32■□□□□ 0.68
PKD2L1-203ENST00000528248 CDK19Q9BWU1 502 aa19.32■□□□□ 0.68
PKD2L1-203ENST00000528248 SENP3Q9H4L4 574 aaPredicted RBP19.32■□□□□ 0.68
PKD2L1-203ENST00000528248 PNPLA6Q8IY17 1366 aa19.32■□□□□ 0.68
PKD2L1-203ENST00000528248 TSR2Q969E8 191 aaKnown RBP19.31■□□□□ 0.68
PKD2L1-203ENST00000528248 DIAPH1O60610 1272 aaKnown RBP19.31■□□□□ 0.68
PKD2L1-203ENST00000528248 EXOSC9Q06265 439 aaKnown RBP19.31■□□□□ 0.68
PKD2L1-203ENST00000528248 FTSJ3Q8IY81 847 aaKnown RBP19.31■□□□□ 0.68
PKD2L1-203ENST00000528248 PPP6R1Q9UPN7 881 aa19.31■□□□□ 0.68
PKD2L1-203ENST00000528248 PDZRN3Q9UPQ7 1066 aa19.31■□□□□ 0.68
PKD2L1-203ENST00000528248 KIF20BQ96Q89 1820 aa19.3■□□□□ 0.68
PKD2L1-203ENST00000528248 STAG3Q9UJ98 1225 aa19.3■□□□□ 0.68
PKD2L1-203ENST00000528248 SMC4Q9NTJ3 1288 aa19.29■□□□□ 0.68
PKD2L1-203ENST00000528248 SEC24BO95487 1268 aa19.28■□□□□ 0.68
PKD2L1-203ENST00000528248 CABP1Q9NZU7 370 aa19.28■□□□□ 0.68
PKD2L1-203ENST00000528248 DLC1Q96QB1 1528 aa19.28■□□□□ 0.68
PKD2L1-203ENST00000528248 RIPK4P57078 832 aa19.28■□□□□ 0.68
PKD2L1-203ENST00000528248 REREQ9P2R6 1566 aa19.27■□□□□ 0.68
PKD2L1-203ENST00000528248 CDC42BPGQ6DT37 1551 aa19.26■□□□□ 0.67
PKD2L1-203ENST00000528248 AGLP35573 1532 aa19.26■□□□□ 0.67
PKD2L1-203ENST00000528248 SSH1Q8WYL5 1049 aa19.26■□□□□ 0.67
PKD2L1-203ENST00000528248 FCHSD2O94868 740 aa19.26■□□□□ 0.67
PKD2L1-203ENST00000528248 DDX19BQ9UMR2 479 aa19.26■□□□□ 0.67
PKD2L1-203ENST00000528248 TRIM27P14373 513 aa19.25■□□□□ 0.67
PKD2L1-203ENST00000528248 ATF7IPQ6VMQ6 1270 aa19.25■□□□□ 0.67
PKD2L1-203ENST00000528248 ATP7BP35670 1465 aa19.25■□□□□ 0.67
PKD2L1-203ENST00000528248 BECN1Q14457 450 aa19.25■□□□□ 0.67
PKD2L1-203ENST00000528248 UPF2Q9HAU5 1272 aaKnown RBP19.24■□□□□ 0.67
PKD2L1-203ENST00000528248 HDAC1Q13547 482 aaPredicted RBP19.23■□□□□ 0.67
PKD2L1-203ENST00000528248 A2ML1A8K2U0 1454 aa19.23■□□□□ 0.67
PKD2L1-203ENST00000528248 GSE1Q14687 1217 aa19.22■□□□□ 0.67
PKD2L1-203ENST00000528248 SPATA31D1Q6ZQQ2 1576 aa19.22■□□□□ 0.67
PKD2L1-203ENST00000528248 FAM69CQ0P6D2 419 aa19.22■□□□□ 0.67
PKD2L1-203ENST00000528248 CYB5RLQ6IPT4 315 aa19.22■□□□□ 0.67
PKD2L1-203ENST00000528248 NOB1Q9ULX3 412 aaKnown RBP19.22■□□□□ 0.67
PKD2L1-203ENST00000528248 IPO8O15397 1037 aaKnown RBP19.21■□□□□ 0.67
PKD2L1-203ENST00000528248 RIMS2Q9UQ26 1411 aa19.21■□□□□ 0.67
PKD2L1-203ENST00000528248 KIF16BQ96L93 1317 aa19.21■□□□□ 0.67
PKD2L1-203ENST00000528248 SETD1AO15047 1707 aaKnown RBP19.21■□□□□ 0.67
PKD2L1-203ENST00000528248 ALDH1L2Q3SY69 923 aa19.21■□□□□ 0.67
PKD2L1-203ENST00000528248 ITPRIPQ8IWB1 547 aa19.21■□□□□ 0.67
PKD2L1-203ENST00000528248 POLKQ9UBT6 870 aa19.21■□□□□ 0.67
PKD2L1-203ENST00000528248 TBC1D32Q96NH3 1257 aa19.2■□□□□ 0.66
PKD2L1-203ENST00000528248 RSPH6AQ9H0K4 717 aa19.2■□□□□ 0.66
PKD2L1-203ENST00000528248 LRRC7Q96NW7 1537 aa19.2■□□□□ 0.66
PKD2L1-203ENST00000528248 FAM135BQ49AJ0 1406 aa19.2■□□□□ 0.66
PKD2L1-203ENST00000528248 WAPLQ7Z5K2 1190 aa19.2■□□□□ 0.66
PKD2L1-203ENST00000528248 DIP2BQ9P265 1576 aa19.19■□□□□ 0.66
PKD2L1-203ENST00000528248 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.19■□□□□ 0.66
PKD2L1-203ENST00000528248 ZNF428Q96B54 188 aa19.18■□□□□ 0.66
PKD2L1-203ENST00000528248 RIMBP3CA6NJZ7 1639 aa19.18■□□□□ 0.66
PKD2L1-203ENST00000528248 RIMBP3BA6NNM3 1639 aa19.18■□□□□ 0.66
PKD2L1-203ENST00000528248 RIMBP3Q9UFD9 1639 aa19.18■□□□□ 0.66
PKD2L1-203ENST00000528248 PRKAR2BP31323 418 aa19.17■□□□□ 0.66
PKD2L1-203ENST00000528248 FRAT2O75474 233 aaPredicted RBP19.17■□□□□ 0.66
PKD2L1-203ENST00000528248 BRPF1P55201 1214 aaPredicted RBP19.17■□□□□ 0.66
PKD2L1-203ENST00000528248 TMEM57Q8N5G2 664 aa19.17■□□□□ 0.66
PKD2L1-203ENST00000528248 ZBTB40Q9NUA8 1239 aa19.17■□□□□ 0.66
PKD2L1-203ENST00000528248 MAP2P11137 1827 aaKnown RBP19.17■□□□□ 0.66
PKD2L1-203ENST00000528248 PPIP5K1Q6PFW1 1433 aa19.17■□□□□ 0.66
PKD2L1-203ENST00000528248 SMC5Q8IY18 1101 aa19.16■□□□□ 0.66
PKD2L1-203ENST00000528248 CPSF1Q10570 1443 aaKnown RBP19.16■□□□□ 0.66
PKD2L1-203ENST00000528248 EDC4Q6P2E9 1401 aaKnown RBP19.16■□□□□ 0.66
PKD2L1-203ENST00000528248 CALD1Q05682 793 aaKnown RBP19.15■□□□□ 0.66
PKD2L1-203ENST00000528248 NFE2L2Q16236 605 aa19.14■□□□□ 0.66
PKD2L1-203ENST00000528248 WASLO00401 505 aaPredicted RBP19.14■□□□□ 0.65
PKD2L1-203ENST00000528248 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.14■□□□□ 0.65
PKD2L1-203ENST00000528248 TSPOAP1O95153 1857 aa19.14■□□□□ 0.65
PKD2L1-203ENST00000528248 FBLN1P23142 703 aa19.13■□□□□ 0.65
PKD2L1-203ENST00000528248 NRXN3Q9Y4C0 1643 aa19.12■□□□□ 0.65
PKD2L1-203ENST00000528248 AATKQ6ZMQ8 1374 aa19.12■□□□□ 0.65
PKD2L1-203ENST00000528248 CDK12Q9NYV4 1490 aaPredicted RBP19.11■□□□□ 0.65
PKD2L1-203ENST00000528248 IL13P35225 146 aa19.11■□□□□ 0.65
PKD2L1-203ENST00000528248 PHACTR3Q96KR7 559 aa19.11■□□□□ 0.65
PKD2L1-203ENST00000528248 SIRT1Q96EB6 747 aa19.11■□□□□ 0.65
PKD2L1-203ENST00000528248 HMOX1P09601 288 aa19.09■□□□□ 0.65
PKD2L1-203ENST00000528248 GNAI1P63096 354 aa19.09■□□□□ 0.65
PKD2L1-203ENST00000528248 ARHGAP45Q92619 1136 aa19.09■□□□□ 0.65
PKD2L1-203ENST00000528248 CHMP4BQ9H444 224 aaKnown RBP19.09■□□□□ 0.65
PKD2L1-203ENST00000528248 IFT57Q9NWB7 429 aa19.09■□□□□ 0.65
PKD2L1-203ENST00000528248 EMILIN1Q9Y6C2 1016 aa19.09■□□□□ 0.65
PKD2L1-203ENST00000528248 TBC1D2Q9BYX2 928 aa19.09■□□□□ 0.65
PKD2L1-203ENST00000528248 ANTXR1Q9H6X2 564 aa19.09■□□□□ 0.65
PKD2L1-203ENST00000528248 VAMP4O75379 141 aa19.08■□□□□ 0.65
PKD2L1-203ENST00000528248 NME9Q86XW9 330 aa19.08■□□□□ 0.65
PKD2L1-203ENST00000528248 METP08581 1390 aa19.08■□□□□ 0.65
PKD2L1-203ENST00000528248 NUCB1Q02818 461 aa19.08■□□□□ 0.64
PKD2L1-203ENST00000528248 NUDT16Q96DE0 195 aaKnown RBP19.08■□□□□ 0.64
PKD2L1-203ENST00000528248 KNDC1Q76NI1 1749 aa19.08■□□□□ 0.64
PKD2L1-203ENST00000528248 HDGFP51858 240 aaKnown RBP19.07■□□□□ 0.64
PKD2L1-203ENST00000528248 MLECQ14165 292 aa19.07■□□□□ 0.64
PKD2L1-203ENST00000528248 C22orf23Q9BZE7 217 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms