RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	CT47B1	P0C2W7	299 aa	Predicted RBP	13.29	□□□□□ -0.28
PGAP2-231	ENST00000528216	PDE3A	Q14432	1141 aa		13.29	□□□□□ -0.28
PGAP2-231	ENST00000528216	COL3A1	P02461	1466 aa	Predicted RBP	13.29	□□□□□ -0.28
PGAP2-231	ENST00000528216	CRBN	Q96SW2	442 aa		13.28	□□□□□ -0.28
PGAP2-231	ENST00000528216	PNPLA6	Q8IY17	1366 aa		13.28	□□□□□ -0.28
PGAP2-231	ENST00000528216	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.27	□□□□□ -0.28
PGAP2-231	ENST00000528216	TCP11L2	Q8N4U5	519 aa		13.27	□□□□□ -0.28
PGAP2-231	ENST00000528216	MYH16	Q9H6N6	1097 aa		13.27	□□□□□ -0.28
PGAP2-231	ENST00000528216	PLEKHG1	Q9ULL1	1385 aa		13.27	□□□□□ -0.28
PGAP2-231	ENST00000528216	EDC4	Q6P2E9	1401 aa	Known RBP	13.27	□□□□□ -0.29
PGAP2-231	ENST00000528216	FYB1	O15117	783 aa		13.27	□□□□□ -0.29
PGAP2-231	ENST00000528216	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
PGAP2-231	ENST00000528216	ANP32E	Q9BTT0	268 aa		13.27	□□□□□ -0.29
PGAP2-231	ENST00000528216	CPSF1	Q10570	1443 aa	Known RBP	13.26	□□□□□ -0.29
PGAP2-231	ENST00000528216	IL16	Q14005	1332 aa		13.26	□□□□□ -0.29
PGAP2-231	ENST00000528216	WASL	O00401	505 aa	Predicted RBP	13.25	□□□□□ -0.29
PGAP2-231	ENST00000528216	TNNT2	P45379	298 aa	Predicted RBP	13.25	□□□□□ -0.29
PGAP2-231	ENST00000528216	MON2	Q7Z3U7	1717 aa		13.24	□□□□□ -0.29
PGAP2-231	ENST00000528216	PLIN1	O60240	522 aa		13.24	□□□□□ -0.29
PGAP2-231	ENST00000528216	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.24	□□□□□ -0.29
PGAP2-231	ENST00000528216	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
PGAP2-231	ENST00000528216	TBX22	Q9Y458	520 aa		13.24	□□□□□ -0.29
PGAP2-231	ENST00000528216	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.24	□□□□□ -0.29
PGAP2-231	ENST00000528216	CABP1	Q9NZU7	370 aa		13.23	□□□□□ -0.29
PGAP2-231	ENST00000528216	KDM2B	Q8NHM5	1336 aa		13.23	□□□□□ -0.29
PGAP2-231	ENST00000528216	AATK	Q6ZMQ8	1374 aa		13.23	□□□□□ -0.29
PGAP2-231	ENST00000528216	DIP2A	Q14689	1571 aa		13.23	□□□□□ -0.29
PGAP2-231	ENST00000528216	AKAP12	Q02952	1782 aa		13.23	□□□□□ -0.29
PGAP2-231	ENST00000528216	ANP32A	P39687	249 aa	Known RBP	13.23	□□□□□ -0.29
PGAP2-231	ENST00000528216	ZNF692	Q9BU19	519 aa	Predicted RBP	13.23	□□□□□ -0.29
PGAP2-231	ENST00000528216	ITSN1	Q15811	1721 aa		13.22	□□□□□ -0.29
PGAP2-231	ENST00000528216	DIAPH1	O60610	1272 aa	Known RBP	13.22	□□□□□ -0.29
PGAP2-231	ENST00000528216	GGNBP2	Q9H3C7	697 aa		13.22	□□□□□ -0.29
PGAP2-231	ENST00000528216	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.22	□□□□□ -0.29
PGAP2-231	ENST00000528216	MAPK8IP3	Q9UPT6	1336 aa		13.22	□□□□□ -0.29
PGAP2-231	ENST00000528216	MET	P08581	1390 aa		13.22	□□□□□ -0.29
PGAP2-231	ENST00000528216	PPIP5K1	Q6PFW1	1433 aa		13.21	□□□□□ -0.29
PGAP2-231	ENST00000528216	CCDC61	Q9Y6R9	512 aa		13.21	□□□□□ -0.29
PGAP2-231	ENST00000528216	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.21	□□□□□ -0.3
PGAP2-231	ENST00000528216	FCHSD2	O94868	740 aa		13.2	□□□□□ -0.3
PGAP2-231	ENST00000528216	PLEKHF1	Q96S99	279 aa		13.2	□□□□□ -0.3
PGAP2-231	ENST00000528216	ADAMTS13	Q76LX8	1427 aa		13.2	□□□□□ -0.3
PGAP2-231	ENST00000528216	NEFM	P07197	916 aa		13.2	□□□□□ -0.3
PGAP2-231	ENST00000528216	KCNA6	P17658	529 aa		13.19	□□□□□ -0.3
PGAP2-231	ENST00000528216	C20orf194	Q5TEA3	1177 aa		13.19	□□□□□ -0.3
PGAP2-231	ENST00000528216	ERICH6	Q7L0X2	663 aa		13.19	□□□□□ -0.3
PGAP2-231	ENST00000528216	WAPL	Q7Z5K2	1190 aa		13.19	□□□□□ -0.3
PGAP2-231	ENST00000528216	RARS	P54136	660 aa	Known RBP	13.18	□□□□□ -0.3
PGAP2-231	ENST00000528216	CALD1	Q05682	793 aa	Known RBP	13.18	□□□□□ -0.3
PGAP2-231	ENST00000528216	AMOTL2	Q9Y2J4	779 aa		13.18	□□□□□ -0.3
PGAP2-231	ENST00000528216	TOPAZ1	Q8N9V7	1692 aa		13.18	□□□□□ -0.3
PGAP2-231	ENST00000528216	CANX	P27824	592 aa	Known RBP	13.18	□□□□□ -0.3
PGAP2-231	ENST00000528216	TMPO	P42166	694 aa	Known RBP	13.18	□□□□□ -0.3
PGAP2-231	ENST00000528216	ZNF428	Q96B54	188 aa		13.17	□□□□□ -0.3
PGAP2-231	ENST00000528216	NUDT16	Q96DE0	195 aa	Known RBP	13.17	□□□□□ -0.3
PGAP2-231	ENST00000528216	BACH2	Q9BYV9	841 aa		13.17	□□□□□ -0.3
PGAP2-231	ENST00000528216	PTCH1	Q13635	1447 aa		13.16	□□□□□ -0.3
PGAP2-231	ENST00000528216	U2SURP	O15042	1029 aa	Known RBP	13.16	□□□□□ -0.3
PGAP2-231	ENST00000528216	PROSER2	Q86WR7	435 aa	Predicted RBP	13.16	□□□□□ -0.3
PGAP2-231	ENST00000528216	MAP2	P11137	1827 aa	Known RBP	13.16	□□□□□ -0.3
PGAP2-231	ENST00000528216	PDE4A	P27815	886 aa		13.16	□□□□□ -0.3
PGAP2-231	ENST00000528216	RBM33	Q96EV2	1170 aa	Known RBP	13.16	□□□□□ -0.3
PGAP2-231	ENST00000528216	BCAR3	O75815	825 aa		13.15	□□□□□ -0.3
PGAP2-231	ENST00000528216	POLK	Q9UBT6	870 aa		13.15	□□□□□ -0.3
PGAP2-231	ENST00000528216	PIK3R4	Q99570	1358 aa		13.14	□□□□□ -0.31
PGAP2-231	ENST00000528216	NEUROD2	Q15784	382 aa		13.14	□□□□□ -0.31
PGAP2-231	ENST00000528216	PMFBP1	Q8TBY8	1022 aa		13.14	□□□□□ -0.31
PGAP2-231	ENST00000528216	COG3	Q96JB2	828 aa		13.14	□□□□□ -0.31
PGAP2-231	ENST00000528216	IPO9	Q96P70	1041 aa	Known RBP	13.14	□□□□□ -0.31
PGAP2-231	ENST00000528216	RRP7A	Q9Y3A4	280 aa	Known RBP	13.14	□□□□□ -0.31
PGAP2-231	ENST00000528216	NRK	Q7Z2Y5	1582 aa		13.14	□□□□□ -0.31
PGAP2-231	ENST00000528216	LRRC7	Q96NW7	1537 aa		13.14	□□□□□ -0.31
PGAP2-231	ENST00000528216	PLEKHG3	A1L390	1219 aa		13.13	□□□□□ -0.31
PGAP2-231	ENST00000528216	MSH5	O43196	834 aa		13.13	□□□□□ -0.31
PGAP2-231	ENST00000528216	CERK	Q8TCT0	537 aa		13.13	□□□□□ -0.31
PGAP2-231	ENST00000528216	CLUAP1	Q96AJ1	413 aa		13.13	□□□□□ -0.31
PGAP2-231	ENST00000528216	PTPRU	Q92729	1446 aa		13.13	□□□□□ -0.31
PGAP2-231	ENST00000528216	ROBO2	Q9HCK4	1378 aa		13.13	□□□□□ -0.31
PGAP2-231	ENST00000528216	LMOD3	Q0VAK6	560 aa		13.13	□□□□□ -0.31
PGAP2-231	ENST00000528216	TRIM35	Q9UPQ4	493 aa		13.12	□□□□□ -0.31
PGAP2-231	ENST00000528216	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.12	□□□□□ -0.31
PGAP2-231	ENST00000528216	C14orf37	Q86TY3	774 aa		13.11	□□□□□ -0.31
PGAP2-231	ENST00000528216	RSPH6A	Q9H0K4	717 aa		13.11	□□□□□ -0.31
PGAP2-231	ENST00000528216	NOP58	Q9Y2X3	529 aa	Known RBP	13.11	□□□□□ -0.31
PGAP2-231	ENST00000528216	LTBP4	Q8N2S1	1624 aa		13.11	□□□□□ -0.31
PGAP2-231	ENST00000528216	RIPK4	P57078	832 aa		13.11	□□□□□ -0.31
PGAP2-231	ENST00000528216	ALDH1L2	Q3SY69	923 aa		13.11	□□□□□ -0.31
PGAP2-231	ENST00000528216	ZKSCAN2	Q63HK3	967 aa		13.11	□□□□□ -0.31
PGAP2-231	ENST00000528216	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
PGAP2-231	ENST00000528216	NALCN	Q8IZF0	1738 aa		13.11	□□□□□ -0.31
PGAP2-231	ENST00000528216	BRPF1	P55201	1214 aa	Predicted RBP	13.1	□□□□□ -0.31
PGAP2-231	ENST00000528216	DDRGK1	Q96HY6	314 aa		13.1	□□□□□ -0.31
PGAP2-231	ENST00000528216	TTC21A	Q8NDW8	1320 aa		13.1	□□□□□ -0.31
PGAP2-231	ENST00000528216	KIF16B	Q96L93	1317 aa		13.1	□□□□□ -0.31
PGAP2-231	ENST00000528216	IPO8	O15397	1037 aa	Known RBP	13.09	□□□□□ -0.31
PGAP2-231	ENST00000528216	NFE2L2	Q16236	605 aa		13.09	□□□□□ -0.31
PGAP2-231	ENST00000528216	XRN1	Q8IZH2	1706 aa	Known RBP	13.09	□□□□□ -0.31
PGAP2-231	ENST00000528216	ANKAR	Q7Z5J8	1434 aa		13.09	□□□□□ -0.31
PGAP2-231	ENST00000528216	TMEM94	Q12767	1356 aa		13.09	□□□□□ -0.31
PGAP2-231	ENST00000528216	IL13	P35225	146 aa		13.09	□□□□□ -0.31

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