RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 ARHGEF10O15013 1369 aa17.07■□□□□ 0.32
SDHD-205ENST00000528048 AFF2P51816 1311 aa17.07■□□□□ 0.32
SDHD-205ENST00000528048 FOXD4L1Q9NU39 408 aa17.07■□□□□ 0.32
SDHD-205ENST00000528048 CABP1Q9NZU7 370 aa17.07■□□□□ 0.32
SDHD-205ENST00000528048 ADGRB2O60241 1585 aa17.06■□□□□ 0.32
SDHD-205ENST00000528048 FMN2Q9NZ56 1722 aa17.06■□□□□ 0.32
SDHD-205ENST00000528048 LRP6O75581 1613 aa17.06■□□□□ 0.32
SDHD-205ENST00000528048 NHSL1Q5SYE7 1610 aa17.06■□□□□ 0.32
SDHD-205ENST00000528048 SOCS7O14512 581 aa17.05■□□□□ 0.32
SDHD-205ENST00000528048 QTRT2Q9H974 415 aaKnown RBP17.05■□□□□ 0.32
SDHD-205ENST00000528048 RXRBP28702 533 aa17.04■□□□□ 0.32
SDHD-205ENST00000528048 CABLES1Q8TDN4 633 aa17.04■□□□□ 0.32
SDHD-205ENST00000528048 USP21Q9UK80 565 aa17.04■□□□□ 0.32
SDHD-205ENST00000528048 RALGAPBQ86X10 1494 aa17.04■□□□□ 0.32
SDHD-205ENST00000528048 TNS3Q68CZ2 1445 aa17.04■□□□□ 0.32
SDHD-205ENST00000528048 ST20-MTHFSA0A0A6YYL1 179 aa17.03■□□□□ 0.32
SDHD-205ENST00000528048 ATP7BP35670 1465 aa17.02■□□□□ 0.32
SDHD-205ENST00000528048 FNBP4Q8N3X1 1017 aaPredicted RBP17.02■□□□□ 0.32
SDHD-205ENST00000528048 ABTB2Q8N961 1025 aa17.02■□□□□ 0.32
SDHD-205ENST00000528048 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.32
SDHD-205ENST00000528048 PPIP5K1Q6PFW1 1433 aa17.02■□□□□ 0.31
SDHD-205ENST00000528048 SHPRHQ149N8 1683 aa17.01■□□□□ 0.31
SDHD-205ENST00000528048 TMC1Q8TDI8 760 aa17.01■□□□□ 0.31
SDHD-205ENST00000528048 POLR3AO14802 1390 aaPredicted RBP17.01■□□□□ 0.31
SDHD-205ENST00000528048 ATAD2Q6PL18 1390 aa17.01■□□□□ 0.31
SDHD-205ENST00000528048 KIF1AQ12756 1690 aa17.01■□□□□ 0.31
SDHD-205ENST00000528048 TRPM1Q7Z4N2 1603 aa17■□□□□ 0.31
SDHD-205ENST00000528048 TRPC5Q9UL62 973 aaPredicted RBP17■□□□□ 0.31
SDHD-205ENST00000528048 ARHGEF28Q8N1W1 1705 aaKnown RBP16.99■□□□□ 0.31
SDHD-205ENST00000528048 NUTM2GQ5VZR2 741 aa16.99■□□□□ 0.31
SDHD-205ENST00000528048 RBM6P78332 1123 aaKnown RBP16.98■□□□□ 0.31
SDHD-205ENST00000528048 NLRP13Q86W25 1043 aa16.98■□□□□ 0.31
SDHD-205ENST00000528048 PUS7Q96PZ0 661 aaKnown RBP16.98■□□□□ 0.31
SDHD-205ENST00000528048 SBNO2Q9Y2G9 1366 aa16.98■□□□□ 0.31
SDHD-205ENST00000528048 TMF1P82094 1093 aa16.97■□□□□ 0.31
SDHD-205ENST00000528048 BRD4O60885 1362 aaPredicted RBP16.97■□□□□ 0.31
SDHD-205ENST00000528048 HDGFL2Q7Z4V5 671 aaPredicted RBP16.96■□□□□ 0.31
SDHD-205ENST00000528048 UNC5CLQ8IV45 518 aa16.96■□□□□ 0.31
SDHD-205ENST00000528048 USP32Q8NFA0 1604 aa16.96■□□□□ 0.3
SDHD-205ENST00000528048 USP47Q96K76 1375 aa16.95■□□□□ 0.3
SDHD-205ENST00000528048 NLRP6P59044 892 aa16.95■□□□□ 0.3
SDHD-205ENST00000528048 CDCA8Q53HL2 280 aa16.95■□□□□ 0.3
SDHD-205ENST00000528048 TERF2IPQ9NYB0 399 aa16.95■□□□□ 0.3
SDHD-205ENST00000528048 FAM83GA6ND36 823 aa16.94■□□□□ 0.3
SDHD-205ENST00000528048 TESK2Q96S53 571 aa16.94■□□□□ 0.3
SDHD-205ENST00000528048 PRDM11Q9NQV5 511 aa16.94■□□□□ 0.3
SDHD-205ENST00000528048 CCDC9Q9Y3X0 531 aaKnown RBP16.94■□□□□ 0.3
SDHD-205ENST00000528048 SLC12A5Q9H2X9 1139 aa16.93■□□□□ 0.3
SDHD-205ENST00000528048 ZC3H6P61129 1189 aaKnown RBP16.91■□□□□ 0.3
SDHD-205ENST00000528048 GJD4Q96KN9 370 aaPredicted RBP16.91■□□□□ 0.3
SDHD-205ENST00000528048 TTC21BQ7Z4L5 1316 aa16.91■□□□□ 0.3
SDHD-205ENST00000528048 KTN1Q86UP2 1357 aaKnown RBP16.9■□□□□ 0.3
SDHD-205ENST00000528048 EIF4G2P78344 907 aaKnown RBP eCLIP16.9■□□□□ 0.3
SDHD-205ENST00000528048 BTG4Q9NY30 223 aa16.9■□□□□ 0.3
SDHD-205ENST00000528048 TTC21AQ8NDW8 1320 aa16.9■□□□□ 0.3
SDHD-205ENST00000528048 COL22A1Q8NFW1 1626 aaPredicted RBP16.89■□□□□ 0.29
SDHD-205ENST00000528048 USP6P35125 1406 aa16.89■□□□□ 0.29
SDHD-205ENST00000528048 GCP02774 474 aa16.89■□□□□ 0.29
SDHD-205ENST00000528048 EVA1CP58658 441 aa16.89■□□□□ 0.29
SDHD-205ENST00000528048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.89■□□□□ 0.29
SDHD-205ENST00000528048 ZBTB12Q9Y330 459 aaPredicted RBP16.89■□□□□ 0.29
SDHD-205ENST00000528048 QRICH2Q9H0J4 1663 aa16.88■□□□□ 0.29
SDHD-205ENST00000528048 ZBTB7CA1YPR0 619 aa16.88■□□□□ 0.29
SDHD-205ENST00000528048 VPS72Q15906 364 aa16.88■□□□□ 0.29
SDHD-205ENST00000528048 ATF5Q9Y2D1 282 aaPredicted RBP16.88■□□□□ 0.29
SDHD-205ENST00000528048 BCL9LQ86UU0 1499 aa16.86■□□□□ 0.29
SDHD-205ENST00000528048 CHRNA2Q15822 529 aa16.86■□□□□ 0.29
SDHD-205ENST00000528048 CHRDL2Q6WN34 429 aa16.86■□□□□ 0.29
SDHD-205ENST00000528048 KCNH5Q8NCM2 988 aa16.86■□□□□ 0.29
SDHD-205ENST00000528048 RGPD8O14715 1765 aaPredicted RBP16.86■□□□□ 0.29
SDHD-205ENST00000528048 KIAA0232Q92628 1395 aa16.86■□□□□ 0.29
SDHD-205ENST00000528048 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
SDHD-205ENST00000528048 USP19O94966 1318 aa16.85■□□□□ 0.29
SDHD-205ENST00000528048 NINLQ9Y2I6 1382 aa16.85■□□□□ 0.29
SDHD-205ENST00000528048 ATRNO75882 1429 aa16.85■□□□□ 0.29
SDHD-205ENST00000528048 CPSF1Q10570 1443 aaKnown RBP16.85■□□□□ 0.29
SDHD-205ENST00000528048 STRN4Q9NRL3 753 aa16.84■□□□□ 0.29
SDHD-205ENST00000528048 SLIT2O94813 1529 aa16.84■□□□□ 0.29
SDHD-205ENST00000528048 A0A0G2JS52 829 aa16.83■□□□□ 0.28
SDHD-205ENST00000528048 SOX12O15370 315 aa16.83■□□□□ 0.28
SDHD-205ENST00000528048 HSPA5P11021 654 aaKnown RBP16.83■□□□□ 0.28
SDHD-205ENST00000528048 MYT1Q01538 1121 aa16.83■□□□□ 0.28
SDHD-205ENST00000528048 ITSN1Q15811 1721 aa16.83■□□□□ 0.28
SDHD-205ENST00000528048 SSH2Q76I76 1423 aa16.82■□□□□ 0.28
SDHD-205ENST00000528048 CDK12Q9NYV4 1490 aaPredicted RBP16.81■□□□□ 0.28
SDHD-205ENST00000528048 NME9Q86XW9 330 aa16.81■□□□□ 0.28
SDHD-205ENST00000528048 CPDO75976 1380 aa16.79■□□□□ 0.28
SDHD-205ENST00000528048 SEPT12Q8IYM1 358 aa16.79■□□□□ 0.28
SDHD-205ENST00000528048 TRPM3Q9HCF6 1732 aaPredicted RBP16.79■□□□□ 0.28
SDHD-205ENST00000528048 TOPAZ1Q8N9V7 1692 aa16.78■□□□□ 0.28
SDHD-205ENST00000528048 A0A1W2PP64 1363 aa16.78■□□□□ 0.28
SDHD-205ENST00000528048 COG3Q96JB2 828 aa16.78■□□□□ 0.28
SDHD-205ENST00000528048 ZRANB1Q9UGI0 708 aa16.78■□□□□ 0.28
SDHD-205ENST00000528048 EDC4Q6P2E9 1401 aaKnown RBP16.78■□□□□ 0.28
SDHD-205ENST00000528048 FAM98CQ17RN3 349 aaKnown RBP16.77■□□□□ 0.28
SDHD-205ENST00000528048 SPATA31A5Q5VU36 1347 aa16.76■□□□□ 0.27
SDHD-205ENST00000528048 SPATA31A7Q8IWB4 1347 aa16.76■□□□□ 0.27
SDHD-205ENST00000528048 ONECUT3O60422 494 aaPredicted RBP16.76■□□□□ 0.27
SDHD-205ENST00000528048 ARHGEF25Q86VW2 580 aa16.76■□□□□ 0.27
SDHD-205ENST00000528048 USP35Q9P2H5 1018 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms