RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 CCNB3Q8WWL7 1395 aa6.53□□□□□ -1.36
CHD7-205ENST00000527825 NCOA2Q15596 1464 aa6.53□□□□□ -1.36
CHD7-205ENST00000527825 DIP2AQ14689 1571 aa6.52□□□□□ -1.36
CHD7-205ENST00000527825 RTEL1-TNFRSF6BF6WH68 1400 aa6.52□□□□□ -1.37
CHD7-205ENST00000527825 GPATCH8Q9UKJ3 1502 aaKnown RBP6.52□□□□□ -1.37
CHD7-205ENST00000527825 PAXIP1Q6ZW49 1069 aaPredicted RBP6.52□□□□□ -1.37
CHD7-205ENST00000527825 SLC26A8Q96RN1 970 aa6.52□□□□□ -1.37
CHD7-205ENST00000527825 ATF3P18847 181 aa6.51□□□□□ -1.37
CHD7-205ENST00000527825 FOXK1P85037 733 aa6.51□□□□□ -1.37
CHD7-205ENST00000527825 CFAP44Q96MT7 982 aa6.51□□□□□ -1.37
CHD7-205ENST00000527825 GPHNQ9NQX3 736 aaPredicted RBP6.51□□□□□ -1.37
CHD7-205ENST00000527825 LHX6Q9UPM6 363 aa6.51□□□□□ -1.37
CHD7-205ENST00000527825 EEA1Q15075 1411 aa6.5□□□□□ -1.37
CHD7-205ENST00000527825 SENP3-EIF4A1A0A087X0R7 540 aa6.5□□□□□ -1.37
CHD7-205ENST00000527825 CADPS2Q86UW7 1296 aa6.5□□□□□ -1.37
CHD7-205ENST00000527825 PLPP6Q8IY26 295 aa6.5□□□□□ -1.37
CHD7-205ENST00000527825 TRPC5Q9UL62 973 aaPredicted RBP6.5□□□□□ -1.37
CHD7-205ENST00000527825 ARHGAP35Q9NRY4 1499 aa6.49□□□□□ -1.37
CHD7-205ENST00000527825 TMEM2Q9UHN6 1383 aa6.49□□□□□ -1.37
CHD7-205ENST00000527825 BRWD3Q6RI45 1802 aa6.49□□□□□ -1.37
CHD7-205ENST00000527825 UBTFP17480 764 aaKnown RBP6.49□□□□□ -1.37
CHD7-205ENST00000527825 HRCP23327 699 aa6.49□□□□□ -1.37
CHD7-205ENST00000527825 DSG2Q14126 1118 aa6.49□□□□□ -1.37
CHD7-205ENST00000527825 USP21Q9UK80 565 aa6.49□□□□□ -1.37
CHD7-205ENST00000527825 EIF2AK4Q9P2K8 1649 aaKnown RBP6.49□□□□□ -1.37
CHD7-205ENST00000527825 EFCAB6Q5THR3 1501 aa6.49□□□□□ -1.37
CHD7-205ENST00000527825 BLMP54132 1417 aaPredicted RBP6.49□□□□□ -1.37
CHD7-205ENST00000527825 TET3O43151 1660 aa6.49□□□□□ -1.37
CHD7-205ENST00000527825 MARF1Q9Y4F3 1742 aaKnown RBP6.48□□□□□ -1.37
CHD7-205ENST00000527825 MROH1Q8NDA8 1641 aa6.48□□□□□ -1.37
CHD7-205ENST00000527825 PSDA5PKW4 1024 aaPredicted RBP6.48□□□□□ -1.37
CHD7-205ENST00000527825 ADAMTS2O95450 1211 aa6.48□□□□□ -1.37
CHD7-205ENST00000527825 PTCD2Q8WV60 388 aaKnown RBP6.48□□□□□ -1.37
CHD7-205ENST00000527825 LRRC59Q96AG4 307 aaKnown RBP6.48□□□□□ -1.37
CHD7-205ENST00000527825 MYO5BQ9ULV0 1848 aa6.48□□□□□ -1.37
CHD7-205ENST00000527825 CCDC141Q6ZP82 1450 aa6.47□□□□□ -1.37
CHD7-205ENST00000527825 DEFB132Q7Z7B7 95 aa6.47□□□□□ -1.37
CHD7-205ENST00000527825 CASKIN1Q8WXD9 1431 aa6.47□□□□□ -1.37
CHD7-205ENST00000527825 NCOA3Q9Y6Q9 1424 aa6.47□□□□□ -1.37
CHD7-205ENST00000527825 ASXL1Q8IXJ9 1541 aa6.46□□□□□ -1.37
CHD7-205ENST00000527825 UNC13BO14795 1591 aa6.46□□□□□ -1.38
CHD7-205ENST00000527825 LSM11P83369 360 aaKnown RBP eCLIP6.46□□□□□ -1.38
CHD7-205ENST00000527825 SPHKAPQ2M3C7 1700 aa6.46□□□□□ -1.38
CHD7-205ENST00000527825 ANKRD13DQ6ZTN6 518 aa6.46□□□□□ -1.38
CHD7-205ENST00000527825 RNF166Q96A37 237 aaPredicted RBP6.46□□□□□ -1.38
CHD7-205ENST00000527825 SETD5Q9C0A6 1442 aa6.46□□□□□ -1.38
CHD7-205ENST00000527825 C19orf44Q9H6X5 657 aa6.46□□□□□ -1.38
CHD7-205ENST00000527825 MAST1Q9Y2H9 1570 aa6.46□□□□□ -1.38
CHD7-205ENST00000527825 CAMSAP2Q08AD1 1489 aa6.46□□□□□ -1.38
CHD7-205ENST00000527825 PBX2P40425 430 aa6.45□□□□□ -1.38
CHD7-205ENST00000527825 POTEEQ6S8J3 1075 aa6.45□□□□□ -1.38
CHD7-205ENST00000527825 BRINP3Q76B58 766 aa6.45□□□□□ -1.38
CHD7-205ENST00000527825 CRISPLD2Q9H0B8 497 aa6.45□□□□□ -1.38
CHD7-205ENST00000527825 AXIN2Q9Y2T1 843 aa6.45□□□□□ -1.38
CHD7-205ENST00000527825 FYCO1Q9BQS8 1478 aa6.45□□□□□ -1.38
CHD7-205ENST00000527825 MBD5Q9P267 1494 aa6.45□□□□□ -1.38
CHD7-205ENST00000527825 ZNF644Q9H582 1327 aaPredicted RBP6.45□□□□□ -1.38
CHD7-205ENST00000527825 MTUS2Q5JR59 1369 aa6.44□□□□□ -1.38
CHD7-205ENST00000527825 ATRNO75882 1429 aa6.44□□□□□ -1.38
CHD7-205ENST00000527825 PPP1R15AO75807 674 aaPredicted RBP6.44□□□□□ -1.38
CHD7-205ENST00000527825 TSPY4P0CV99 314 aa6.44□□□□□ -1.38
CHD7-205ENST00000527825 TSPY10P0CW01 314 aa6.44□□□□□ -1.38
CHD7-205ENST00000527825 CHD4Q14839 1912 aa6.44□□□□□ -1.38
CHD7-205ENST00000527825 PNPLA6Q8IY17 1366 aa6.44□□□□□ -1.38
CHD7-205ENST00000527825 RGPD1P0DJD0 1748 aa6.43□□□□□ -1.38
CHD7-205ENST00000527825 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.43□□□□□ -1.38
CHD7-205ENST00000527825 PTGER2P43116 358 aa6.43□□□□□ -1.38
CHD7-205ENST00000527825 BAG6P46379 1132 aa6.43□□□□□ -1.38
CHD7-205ENST00000527825 PLCB2Q00722 1185 aa6.43□□□□□ -1.38
CHD7-205ENST00000527825 RSPH4AQ5TD94 716 aa6.43□□□□□ -1.38
CHD7-205ENST00000527825 ADGRB3O60242 1522 aa6.43□□□□□ -1.38
CHD7-205ENST00000527825 EP400Q96L91 3159 aa6.43□□□□□ -1.38
CHD7-205ENST00000527825 GCC2Q8IWJ2 1684 aa6.42□□□□□ -1.38
CHD7-205ENST00000527825 HDGFP51858 240 aaKnown RBP6.42□□□□□ -1.38
CHD7-205ENST00000527825 PPP1R15BQ5SWA1 713 aa6.42□□□□□ -1.38
CHD7-205ENST00000527825 PPP1R1BQ9UD71 204 aaPredicted RBP6.42□□□□□ -1.38
CHD7-205ENST00000527825 NALCNQ8IZF0 1738 aa6.42□□□□□ -1.38
CHD7-205ENST00000527825 PTCH1Q13635 1447 aa6.42□□□□□ -1.38
CHD7-205ENST00000527825 ARHGEF5Q12774 1597 aa6.41□□□□□ -1.38
CHD7-205ENST00000527825 TBC1D12O60347 775 aa6.41□□□□□ -1.38
CHD7-205ENST00000527825 PDE4AP27815 886 aa6.41□□□□□ -1.38
CHD7-205ENST00000527825 R3HDM1Q15032 1099 aaKnown RBP6.41□□□□□ -1.38
CHD7-205ENST00000527825 OXER1Q8TDS5 423 aa6.41□□□□□ -1.38
CHD7-205ENST00000527825 ARHGAP31Q2M1Z3 1444 aa6.41□□□□□ -1.38
CHD7-205ENST00000527825 BCL9LQ86UU0 1499 aa6.41□□□□□ -1.38
CHD7-205ENST00000527825 FNBP4Q8N3X1 1017 aaPredicted RBP6.4□□□□□ -1.38
CHD7-205ENST00000527825 GJD4Q96KN9 370 aaPredicted RBP6.4□□□□□ -1.38
CHD7-205ENST00000527825 PLEKHG1Q9ULL1 1385 aa6.4□□□□□ -1.39
CHD7-205ENST00000527825 DCCP43146 1447 aa6.4□□□□□ -1.39
CHD7-205ENST00000527825 TRPM2O94759 1503 aa6.4□□□□□ -1.39
CHD7-205ENST00000527825 EHBP1L1Q8N3D4 1523 aa6.4□□□□□ -1.39
CHD7-205ENST00000527825 COL22A1Q8NFW1 1626 aaPredicted RBP6.39□□□□□ -1.39
CHD7-205ENST00000527825 CAMTA1Q9Y6Y1 1673 aa6.39□□□□□ -1.39
CHD7-205ENST00000527825 ARHGAP33O14559 1287 aa6.39□□□□□ -1.39
CHD7-205ENST00000527825 C1QTNF8P60827 252 aa6.39□□□□□ -1.39
CHD7-205ENST00000527825 PPP4R3BQ5MIZ7 849 aa6.39□□□□□ -1.39
CHD7-205ENST00000527825 DDX17Q92841 729 aaKnown RBP6.39□□□□□ -1.39
CHD7-205ENST00000527825 KANK1Q14678 1352 aa6.39□□□□□ -1.39
CHD7-205ENST00000527825 A0A0G2JS52 829 aa6.38□□□□□ -1.39
CHD7-205ENST00000527825 MYT1Q01538 1121 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 706.2 ms