RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 YTHDC2Q9H6S0 1430 aaKnown RBP14.69□□□□□ -0.06
CAPN1-210ENST00000527699 GPR162Q16538 588 aa14.69□□□□□ -0.06
CAPN1-210ENST00000527699 ATF5Q9Y2D1 282 aaPredicted RBP14.69□□□□□ -0.06
CAPN1-210ENST00000527699 ANKRD30BQ9BXX2 1392 aa14.69□□□□□ -0.06
CAPN1-210ENST00000527699 PMFBP1Q8TBY8 1022 aa14.68□□□□□ -0.06
CAPN1-210ENST00000527699 BTG4Q9NY30 223 aa14.68□□□□□ -0.06
CAPN1-210ENST00000527699 ABCC11Q96J66 1382 aa14.68□□□□□ -0.06
CAPN1-210ENST00000527699 PIK3C2GO75747 1445 aa14.67□□□□□ -0.06
CAPN1-210ENST00000527699 IFT172Q9UG01 1749 aa14.67□□□□□ -0.06
CAPN1-210ENST00000527699 HSPA6P17066 643 aa14.67□□□□□ -0.06
CAPN1-210ENST00000527699 PRAM1Q96QH2 718 aa14.67□□□□□ -0.06
CAPN1-210ENST00000527699 SLC34A2O95436 690 aa14.66□□□□□ -0.06
CAPN1-210ENST00000527699 PELP1Q8IZL8 1130 aaKnown RBP14.66□□□□□ -0.06
CAPN1-210ENST00000527699 HIRIP3Q9BW71 556 aaPredicted RBP14.66□□□□□ -0.06
CAPN1-210ENST00000527699 PHF8Q9UPP1 1060 aa14.66□□□□□ -0.06
CAPN1-210ENST00000527699 KDM2AQ9Y2K7 1162 aa14.66□□□□□ -0.06
CAPN1-210ENST00000527699 NRAPQ86VF7 1730 aa14.66□□□□□ -0.06
CAPN1-210ENST00000527699 TECPR2O15040 1411 aa14.66□□□□□ -0.06
CAPN1-210ENST00000527699 C14orf93Q9H972 538 aaKnown RBP14.65□□□□□ -0.06
CAPN1-210ENST00000527699 POGKQ9P215 609 aa14.65□□□□□ -0.06
CAPN1-210ENST00000527699 FMN2Q9NZ56 1722 aa14.65□□□□□ -0.06
CAPN1-210ENST00000527699 RGPD8O14715 1765 aaPredicted RBP14.65□□□□□ -0.06
CAPN1-210ENST00000527699 DLC1Q96QB1 1528 aa14.64□□□□□ -0.07
CAPN1-210ENST00000527699 DHX57Q6P158 1386 aaKnown RBP14.63□□□□□ -0.07
CAPN1-210ENST00000527699 THSD7AQ9UPZ6 1657 aa14.63□□□□□ -0.07
CAPN1-210ENST00000527699 PSME1Q06323 249 aa14.63□□□□□ -0.07
CAPN1-210ENST00000527699 PDGFDQ9GZP0 370 aaPredicted RBP14.63□□□□□ -0.07
CAPN1-210ENST00000527699 TRAK1Q9UPV9 953 aa14.63□□□□□ -0.07
CAPN1-210ENST00000527699 KNDC1Q76NI1 1749 aa14.63□□□□□ -0.07
CAPN1-210ENST00000527699 SPATA31A5Q5VU36 1347 aa14.63□□□□□ -0.07
CAPN1-210ENST00000527699 SPATA31A7Q8IWB4 1347 aa14.63□□□□□ -0.07
CAPN1-210ENST00000527699 CASZ1Q86V15 1759 aa14.62□□□□□ -0.07
CAPN1-210ENST00000527699 MINK1Q8N4C8 1332 aaPredicted RBP14.62□□□□□ -0.07
CAPN1-210ENST00000527699 ABCA3Q99758 1704 aa14.61□□□□□ -0.07
CAPN1-210ENST00000527699 TNS3Q68CZ2 1445 aa14.61□□□□□ -0.07
CAPN1-210ENST00000527699 PTGER2P43116 358 aa14.61□□□□□ -0.07
CAPN1-210ENST00000527699 PDE3BQ13370 1112 aa14.61□□□□□ -0.07
CAPN1-210ENST00000527699 SHANK3Q9BYB0 1731 aa14.61□□□□□ -0.07
CAPN1-210ENST00000527699 KIF1AQ12756 1690 aa14.59□□□□□ -0.07
CAPN1-210ENST00000527699 PRELPP51888 382 aa14.59□□□□□ -0.07
CAPN1-210ENST00000527699 TNS4Q8IZW8 715 aa14.59□□□□□ -0.07
CAPN1-210ENST00000527699 BCL11BQ9C0K0 894 aaPredicted RBP14.59□□□□□ -0.07
CAPN1-210ENST00000527699 ANO8Q9HCE9 1232 aaPredicted RBP14.59□□□□□ -0.07
CAPN1-210ENST00000527699 RAB3GAP2Q9H2M9 1393 aa14.59□□□□□ -0.07
CAPN1-210ENST00000527699 COL13A1Q5TAT6 717 aaPredicted RBP14.58□□□□□ -0.08
CAPN1-210ENST00000527699 KLHL34Q8N239 644 aa14.58□□□□□ -0.08
CAPN1-210ENST00000527699 DCAF11Q8TEB1 546 aa14.58□□□□□ -0.08
CAPN1-210ENST00000527699 SIRT1Q96EB6 747 aa14.57□□□□□ -0.08
CAPN1-210ENST00000527699 COL14A1Q05707 1796 aaKnown RBP14.56□□□□□ -0.08
CAPN1-210ENST00000527699 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
CAPN1-210ENST00000527699 USP35Q9P2H5 1018 aa14.56□□□□□ -0.08
CAPN1-210ENST00000527699 NRXN1Q9ULB1 1477 aa14.56□□□□□ -0.08
CAPN1-210ENST00000527699 GPBP1L1Q9HC44 474 aaPredicted RBP14.55□□□□□ -0.08
CAPN1-210ENST00000527699 PRR36Q9H6K5 1346 aa14.55□□□□□ -0.08
CAPN1-210ENST00000527699 ARHGEF10O15013 1369 aa14.55□□□□□ -0.08
CAPN1-210ENST00000527699 NUTM2GQ5VZR2 741 aa14.54□□□□□ -0.08
CAPN1-210ENST00000527699 ARXQ96QS3 562 aa14.54□□□□□ -0.08
CAPN1-210ENST00000527699 SBNO1A3KN83 1393 aa14.53□□□□□ -0.08
CAPN1-210ENST00000527699 NGDNQ8NEJ9 315 aaKnown RBP14.53□□□□□ -0.08
CAPN1-210ENST00000527699 ZNF526Q8TF50 670 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-210ENST00000527699 STRN4Q9NRL3 753 aa14.53□□□□□ -0.08
CAPN1-210ENST00000527699 SPATA31A1Q5TZJ5 1347 aa14.52□□□□□ -0.08
CAPN1-210ENST00000527699 PCDH10Q9P2E7 1040 aa14.52□□□□□ -0.09
CAPN1-210ENST00000527699 ATP10DQ9P241 1426 aa14.51□□□□□ -0.09
CAPN1-210ENST00000527699 MTFR1LQ9H019 292 aa14.51□□□□□ -0.09
CAPN1-210ENST00000527699 STK32BQ9NY57 414 aa14.51□□□□□ -0.09
CAPN1-210ENST00000527699 GPRASP1Q5JY77 1395 aa14.5□□□□□ -0.09
CAPN1-210ENST00000527699 ACIN1Q9UKV3 1341 aaKnown RBP14.5□□□□□ -0.09
CAPN1-210ENST00000527699 WASLO00401 505 aaPredicted RBP14.5□□□□□ -0.09
CAPN1-210ENST00000527699 CHRNA2Q15822 529 aa14.5□□□□□ -0.09
CAPN1-210ENST00000527699 PRDM11Q9NQV5 511 aa14.5□□□□□ -0.09
CAPN1-210ENST00000527699 ADGRB1O14514 1584 aa14.5□□□□□ -0.09
CAPN1-210ENST00000527699 ANKARQ7Z5J8 1434 aa14.49□□□□□ -0.09
CAPN1-210ENST00000527699 TRPM3Q9HCF6 1732 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-210ENST00000527699 APLP1P51693 650 aa14.47□□□□□ -0.09
CAPN1-210ENST00000527699 ZC3H6P61129 1189 aaKnown RBP14.47□□□□□ -0.09
CAPN1-210ENST00000527699 NUDT16Q96DE0 195 aaKnown RBP14.46□□□□□ -0.09
CAPN1-210ENST00000527699 TULP4Q9NRJ4 1543 aa14.46□□□□□ -0.1
CAPN1-210ENST00000527699 PLSCR1O15162 318 aa14.45□□□□□ -0.1
CAPN1-210ENST00000527699 CDK19Q9BWU1 502 aa14.45□□□□□ -0.1
CAPN1-210ENST00000527699 MAP3K5Q99683 1374 aa14.45□□□□□ -0.1
CAPN1-210ENST00000527699 RGPD3A6NKT7 1758 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-210ENST00000527699 RGPD4Q7Z3J3 1758 aa14.45□□□□□ -0.1
CAPN1-210ENST00000527699 ZBTB7CA1YPR0 619 aa14.44□□□□□ -0.1
CAPN1-210ENST00000527699 EVA1CP58658 441 aa14.44□□□□□ -0.1
CAPN1-210ENST00000527699 SGIP1Q9BQI5 828 aa14.44□□□□□ -0.1
CAPN1-210ENST00000527699 ALS2Q96Q42 1657 aa14.43□□□□□ -0.1
CAPN1-210ENST00000527699 SLC15A2Q16348 729 aa14.43□□□□□ -0.1
CAPN1-210ENST00000527699 KIAA0232Q92628 1395 aa14.43□□□□□ -0.1
CAPN1-210ENST00000527699 GOLGB1Q14789 3259 aaKnown RBP14.43□□□□□ -0.1
CAPN1-210ENST00000527699 GRIN3BO60391 1043 aa14.42□□□□□ -0.1
CAPN1-210ENST00000527699 EIF3AQ14152 1382 aaKnown RBP14.42□□□□□ -0.1
CAPN1-210ENST00000527699 NBPF1Q3BBV0 1214 aa14.41□□□□□ -0.1
CAPN1-210ENST00000527699 ACEP12821 1306 aa14.41□□□□□ -0.1
CAPN1-210ENST00000527699 C11orf95C9JLR9 678 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-210ENST00000527699 BARGINQ6ZT62 677 aa14.4□□□□□ -0.1
CAPN1-210ENST00000527699 DNAJC5GQ8N7S2 189 aa14.4□□□□□ -0.1
CAPN1-210ENST00000527699 WWC3Q9ULE0 1092 aa14.4□□□□□ -0.1
CAPN1-210ENST00000527699 ARHGEF28Q8N1W1 1705 aaKnown RBP14.4□□□□□ -0.1
CAPN1-210ENST00000527699 ATP7BP35670 1465 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms