RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 PXDNQ92626 1479 aa32.46■■■□□ 2.79
LRRK1-206ENST00000527698 MARF1Q9Y4F3 1742 aaKnown RBP32.46■■■□□ 2.79
LRRK1-206ENST00000527698 HSPA5P11021 654 aaKnown RBP32.45■■■□□ 2.79
LRRK1-206ENST00000527698 USP21Q9UK80 565 aa32.45■■■□□ 2.79
LRRK1-206ENST00000527698 NINLQ9Y2I6 1382 aa32.44■■■□□ 2.78
LRRK1-206ENST00000527698 TRPC5Q9UL62 973 aaPredicted RBP32.43■■■□□ 2.78
LRRK1-206ENST00000527698 BRD4O60885 1362 aaPredicted RBP32.43■■■□□ 2.78
LRRK1-206ENST00000527698 ZNF692Q9BU19 519 aaPredicted RBP32.42■■■□□ 2.78
LRRK1-206ENST00000527698 CABP1Q9NZU7 370 aa32.42■■■□□ 2.78
LRRK1-206ENST00000527698 ACEP12821 1306 aa32.42■■■□□ 2.78
LRRK1-206ENST00000527698 SBNO1A3KN83 1393 aa32.42■■■□□ 2.78
LRRK1-206ENST00000527698 ATRNO75882 1429 aa32.4■■■□□ 2.78
LRRK1-206ENST00000527698 SPATA31A3Q5VYP0 1347 aa32.36■■■□□ 2.77
LRRK1-206ENST00000527698 XPCQ01831 940 aaPredicted RBP32.35■■■□□ 2.77
LRRK1-206ENST00000527698 ARHGEF10O15013 1369 aa32.34■■■□□ 2.77
LRRK1-206ENST00000527698 TERF2IPQ9NYB0 399 aa32.33■■■□□ 2.77
LRRK1-206ENST00000527698 TNS3Q68CZ2 1445 aa32.33■■■□□ 2.77
LRRK1-206ENST00000527698 TRPM3Q9HCF6 1732 aaPredicted RBP32.32■■■□□ 2.76
LRRK1-206ENST00000527698 BCL9LQ86UU0 1499 aa32.32■■■□□ 2.76
LRRK1-206ENST00000527698 TMC1Q8TDI8 760 aa32.32■■■□□ 2.76
LRRK1-206ENST00000527698 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.31■■■□□ 2.76
LRRK1-206ENST00000527698 HDGFL2Q7Z4V5 671 aaPredicted RBP32.31■■■□□ 2.76
LRRK1-206ENST00000527698 AKAP12Q02952 1782 aa32.31■■■□□ 2.76
LRRK1-206ENST00000527698 CPSF1Q10570 1443 aaKnown RBP32.29■■■□□ 2.76
LRRK1-206ENST00000527698 PAK3O75914 559 aaPredicted RBP32.27■■■□□ 2.76
LRRK1-206ENST00000527698 USP6P35125 1406 aa32.26■■■□□ 2.76
LRRK1-206ENST00000527698 SLC12A5Q9H2X9 1139 aa32.26■■■□□ 2.75
LRRK1-206ENST00000527698 ALS2Q96Q42 1657 aa32.25■■■□□ 2.75
LRRK1-206ENST00000527698 KTN1Q86UP2 1357 aaKnown RBP32.24■■■□□ 2.75
LRRK1-206ENST00000527698 LMOD2Q6P5Q4 547 aa32.23■■■□□ 2.75
LRRK1-206ENST00000527698 EP400Q96L91 3159 aa32.23■■■□□ 2.75
LRRK1-206ENST00000527698 MON2Q7Z3U7 1717 aa32.22■■■□□ 2.75
LRRK1-206ENST00000527698 TTC21AQ8NDW8 1320 aa32.21■■■□□ 2.75
LRRK1-206ENST00000527698 GJD4Q96KN9 370 aaPredicted RBP32.2■■■□□ 2.75
LRRK1-206ENST00000527698 SLIT2O94813 1529 aa32.2■■■□□ 2.74
LRRK1-206ENST00000527698 ANKRD36BQ8N2N9 1353 aa32.19■■■□□ 2.74
LRRK1-206ENST00000527698 SSH2Q76I76 1423 aa32.18■■■□□ 2.74
LRRK1-206ENST00000527698 CD163L1Q9NR16 1453 aa32.18■■■□□ 2.74
LRRK1-206ENST00000527698 ABTB2Q8N961 1025 aa32.18■■■□□ 2.74
LRRK1-206ENST00000527698 CCDC125Q86Z20 511 aa32.17■■■□□ 2.74
LRRK1-206ENST00000527698 EDC4Q6P2E9 1401 aaKnown RBP32.17■■■□□ 2.74
LRRK1-206ENST00000527698 UNC5CLQ8IV45 518 aa32.16■■■□□ 2.74
LRRK1-206ENST00000527698 A0A1W2PP64 1363 aa32.16■■■□□ 2.74
LRRK1-206ENST00000527698 NLRP13Q86W25 1043 aa32.15■■■□□ 2.74
LRRK1-206ENST00000527698 TTC21BQ7Z4L5 1316 aa32.15■■■□□ 2.74
LRRK1-206ENST00000527698 GLI3P10071 1580 aa32.14■■■□□ 2.74
LRRK1-206ENST00000527698 MYOM1P52179 1685 aa32.13■■■□□ 2.73
LRRK1-206ENST00000527698 HAP1P54257 671 aaPredicted RBP32.13■■■□□ 2.73
LRRK1-206ENST00000527698 NRKQ7Z2Y5 1582 aa32.13■■■□□ 2.73
LRRK1-206ENST00000527698 POLR3GLQ9BT43 218 aa32.12■■■□□ 2.73
LRRK1-206ENST00000527698 NWD2Q9ULI1 1742 aa32.1■■■□□ 2.73
LRRK1-206ENST00000527698 ABCA3Q99758 1704 aa32.09■■■□□ 2.73
LRRK1-206ENST00000527698 C11orf95C9JLR9 678 aaPredicted RBP32.08■■■□□ 2.73
LRRK1-206ENST00000527698 KIF7Q2M1P5 1343 aa32.07■■■□□ 2.72
LRRK1-206ENST00000527698 NLRP6P59044 892 aa32.07■■■□□ 2.72
LRRK1-206ENST00000527698 PLCH1Q4KWH8 1693 aa32.07■■■□□ 2.72
LRRK1-206ENST00000527698 SRCAPQ6ZRS2 3230 aa32.06■■■□□ 2.72
LRRK1-206ENST00000527698 PIK3C2AO00443 1686 aa32.05■■■□□ 2.72
LRRK1-206ENST00000527698 BRWD3Q6RI45 1802 aa32.05■■■□□ 2.72
LRRK1-206ENST00000527698 CRYBG1Q9Y4K1 1723 aa32.04■■■□□ 2.72
LRRK1-206ENST00000527698 ZRANB1Q9UGI0 708 aa32.04■■■□□ 2.72
LRRK1-206ENST00000527698 USP19O94966 1318 aa32.03■■■□□ 2.72
LRRK1-206ENST00000527698 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.03■■■□□ 2.72
LRRK1-206ENST00000527698 CABLES1Q8TDN4 633 aa32.02■■■□□ 2.72
LRRK1-206ENST00000527698 USP31Q70CQ4 1352 aa32.02■■■□□ 2.72
LRRK1-206ENST00000527698 NUTM2GQ5VZR2 741 aa32.01■■■□□ 2.71
LRRK1-206ENST00000527698 KCNH5Q8NCM2 988 aa32.01■■■□□ 2.71
LRRK1-206ENST00000527698 CCDC7Q96M83 1385 aa32.01■■■□□ 2.71
LRRK1-206ENST00000527698 USP54Q70EL1 1684 aa32.01■■■□□ 2.71
LRRK1-206ENST00000527698 VPS72Q15906 364 aa32■■■□□ 2.71
LRRK1-206ENST00000527698 BLMP54132 1417 aaPredicted RBP32■■■□□ 2.71
LRRK1-206ENST00000527698 PHRF1Q9P1Y6 1649 aaKnown RBP31.99■■■□□ 2.71
LRRK1-206ENST00000527698 GCP02774 474 aa31.97■■■□□ 2.71
LRRK1-206ENST00000527698 PANK3Q9H999 370 aa31.96■■■□□ 2.71
LRRK1-206ENST00000527698 WASHC2AQ641Q2 1341 aa31.96■■■□□ 2.71
LRRK1-206ENST00000527698 SLIT3O75094 1523 aa31.95■■■□□ 2.71
LRRK1-206ENST00000527698 ONECUT3O60422 494 aaPredicted RBP31.95■■■□□ 2.71
LRRK1-206ENST00000527698 CGNL1Q0VF96 1302 aa31.95■■■□□ 2.7
LRRK1-206ENST00000527698 NME9Q86XW9 330 aa31.94■■■□□ 2.7
LRRK1-206ENST00000527698 CARD14Q9BXL6 1004 aa31.94■■■□□ 2.7
LRRK1-206ENST00000527698 PLEKHG5O94827 1062 aa31.93■■■□□ 2.7
LRRK1-206ENST00000527698 SEPT12Q8IYM1 358 aa31.93■■■□□ 2.7
LRRK1-206ENST00000527698 COG3Q96JB2 828 aa31.93■■■□□ 2.7
LRRK1-206ENST00000527698 CPDO75976 1380 aa31.93■■■□□ 2.7
LRRK1-206ENST00000527698 NSD3Q9BZ95 1437 aa31.92■■■□□ 2.7
LRRK1-206ENST00000527698 KIF20BQ96Q89 1820 aa31.92■■■□□ 2.7
LRRK1-206ENST00000527698 NRAPQ86VF7 1730 aa31.92■■■□□ 2.7
LRRK1-206ENST00000527698 FYB1O15117 783 aa31.91■■■□□ 2.7
LRRK1-206ENST00000527698 COL14A1Q05707 1796 aaKnown RBP31.91■■■□□ 2.7
LRRK1-206ENST00000527698 PRDM11Q9NQV5 511 aa31.89■■■□□ 2.7
LRRK1-206ENST00000527698 FAM83GA6ND36 823 aa31.88■■■□□ 2.69
LRRK1-206ENST00000527698 KNSTRNQ9Y448 316 aa31.88■■■□□ 2.69
LRRK1-206ENST00000527698 OVOS2A0A0J9YW53 1432 aa31.88■■■□□ 2.69
LRRK1-206ENST00000527698 OVOS2Q6IE36 1432 aa31.88■■■□□ 2.69
LRRK1-206ENST00000527698 CCDC9Q9Y3X0 531 aaKnown RBP31.86■■■□□ 2.69
LRRK1-206ENST00000527698 NSD2O96028 1365 aa31.85■■■□□ 2.69
LRRK1-206ENST00000527698 KIAA0232Q92628 1395 aa31.85■■■□□ 2.69
LRRK1-206ENST00000527698 ZC3H6P61129 1189 aaKnown RBP31.85■■■□□ 2.69
LRRK1-206ENST00000527698 SF3B2Q13435 895 aaKnown RBP31.84■■■□□ 2.69
LRRK1-206ENST00000527698 KRT27Q7Z3Y8 459 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms