RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 SWI5Q1ZZU3 235 aa8.98□□□□□ -0.97
NXF1-205ENST00000527497 GRIPAP1Q4V328 841 aa8.98□□□□□ -0.97
NXF1-205ENST00000527497 C1orf216Q8TAB5 229 aa8.98□□□□□ -0.97
NXF1-205ENST00000527497 CHMP4AQ9BY43 222 aa8.98□□□□□ -0.97
NXF1-205ENST00000527497 COLQQ9Y215 455 aaPredicted RBP8.98□□□□□ -0.97
NXF1-205ENST00000527497 ZBBXA8MT70 800 aa8.97□□□□□ -0.97
NXF1-205ENST00000527497 PPP1R3GB7ZBB8 358 aa8.97□□□□□ -0.97
NXF1-205ENST00000527497 FBXO45P0C2W1 286 aa8.97□□□□□ -0.97
NXF1-205ENST00000527497 RASA1P20936 1047 aa8.97□□□□□ -0.97
NXF1-205ENST00000527497 NAALADL2Q58DX5 795 aa8.97□□□□□ -0.97
NXF1-205ENST00000527497 EGFL7Q9UHF1 273 aa8.97□□□□□ -0.97
NXF1-205ENST00000527497 TRIM6-TRIM34B2RNG4 842 aa8.96□□□□□ -0.98
NXF1-205ENST00000527497 RECKO95980 971 aa8.96□□□□□ -0.98
NXF1-205ENST00000527497 FBXO33Q7Z6M2 555 aa8.96□□□□□ -0.98
NXF1-205ENST00000527497 ANKMY2Q8IV38 441 aa8.96□□□□□ -0.98
NXF1-205ENST00000527497 LZTS3O60299 673 aaPredicted RBP8.95□□□□□ -0.98
NXF1-205ENST00000527497 NCLP19338 710 aaKnown RBP8.95□□□□□ -0.98
NXF1-205ENST00000527497 DEPDC4Q8N2C3 294 aa8.95□□□□□ -0.98
NXF1-205ENST00000527497 PER1O15534 1290 aaPredicted RBP8.94□□□□□ -0.98
NXF1-205ENST00000527497 RNF135Q8IUD6 432 aa8.94□□□□□ -0.98
NXF1-205ENST00000527497 FAM174AQ8TBP5 190 aa8.94□□□□□ -0.98
NXF1-205ENST00000527497 BCL2L12Q9HB09 334 aa8.94□□□□□ -0.98
NXF1-205ENST00000527497 SLC10A3P09131 477 aa8.93□□□□□ -0.98
NXF1-205ENST00000527497 C7P10643 843 aa8.93□□□□□ -0.98
NXF1-205ENST00000527497 COL19A1Q14993 1142 aa8.93□□□□□ -0.98
NXF1-205ENST00000527497 ZNF592Q92610 1267 aa8.93□□□□□ -0.98
NXF1-205ENST00000527497 PPP1R1BQ9UD71 204 aaPredicted RBP8.93□□□□□ -0.98
NXF1-205ENST00000527497 CADPSQ9ULU8 1353 aa8.93□□□□□ -0.98
NXF1-205ENST00000527497 NUDT7P0C024 238 aa8.92□□□□□ -0.98
NXF1-205ENST00000527497 NCOA4Q13772 614 aa8.92□□□□□ -0.98
NXF1-205ENST00000527497 DESI1Q6ICB0 168 aa8.92□□□□□ -0.98
NXF1-205ENST00000527497 ZC3H4Q9UPT8 1303 aaKnown RBP8.91□□□□□ -0.98
NXF1-205ENST00000527497 PTPREP23469 700 aa8.91□□□□□ -0.98
NXF1-205ENST00000527497 PPP4R3BQ5MIZ7 849 aa8.91□□□□□ -0.98
NXF1-205ENST00000527497 ASB16Q96NS5 453 aa8.91□□□□□ -0.98
NXF1-205ENST00000527497 SMAPO00193 183 aa8.9□□□□□ -0.98
NXF1-205ENST00000527497 DPYDQ12882 1025 aa8.9□□□□□ -0.98
NXF1-205ENST00000527497 SLFNL1Q499Z3 407 aa8.9□□□□□ -0.98
NXF1-205ENST00000527497 RETREG3Q86VR2 466 aa8.9□□□□□ -0.98
NXF1-205ENST00000527497 ZSCAN29Q8IWY8 852 aaPredicted RBP8.9□□□□□ -0.98
NXF1-205ENST00000527497 H3BRB1 525 aa8.89□□□□□ -0.99
NXF1-205ENST00000527497 ICMTO60725 284 aa8.89□□□□□ -0.99
NXF1-205ENST00000527497 ABL1P00519 1130 aa8.89□□□□□ -0.99
NXF1-205ENST00000527497 MAPK1P28482 360 aa8.89□□□□□ -0.99
NXF1-205ENST00000527497 TSNAXIP1Q2TAA8 658 aa8.89□□□□□ -0.99
NXF1-205ENST00000527497 GLYCTKQ8IVS8 523 aa8.89□□□□□ -0.99
NXF1-205ENST00000527497 TUT1Q9H6E5 874 aaKnown RBP8.89□□□□□ -0.99
NXF1-205ENST00000527497 FKBPLQ9UIM3 349 aa8.89□□□□□ -0.99
NXF1-205ENST00000527497 DCTN4Q9UJW0 460 aa8.89□□□□□ -0.99
NXF1-205ENST00000527497 ERCC5P28715 1186 aaPredicted RBP8.88□□□□□ -0.99
NXF1-205ENST00000527497 MCCD1P59942 119 aaPredicted RBP8.88□□□□□ -0.99
NXF1-205ENST00000527497 TAGLNQ01995 201 aaKnown RBP8.88□□□□□ -0.99
NXF1-205ENST00000527497 FUT2Q10981 343 aa8.88□□□□□ -0.99
NXF1-205ENST00000527497 LYPD8Q6UX82 237 aa8.88□□□□□ -0.99
NXF1-205ENST00000527497 TAS1R3Q7RTX0 852 aa8.88□□□□□ -0.99
NXF1-205ENST00000527497 TRIM50Q86XT4 487 aa8.88□□□□□ -0.99
NXF1-205ENST00000527497 ANKRD13AQ8IZ07 590 aa8.88□□□□□ -0.99
NXF1-205ENST00000527497 OGFOD1Q8N543 542 aa8.88□□□□□ -0.99
NXF1-205ENST00000527497 SYMPKQ92797 1274 aaKnown RBP8.88□□□□□ -0.99
NXF1-205ENST00000527497 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.88□□□□□ -0.99
NXF1-205ENST00000527497 PSDA5PKW4 1024 aaPredicted RBP8.87□□□□□ -0.99
NXF1-205ENST00000527497 SCNN1AP37088 669 aa8.87□□□□□ -0.99
NXF1-205ENST00000527497 ATP6V1AP38606 617 aa8.87□□□□□ -0.99
NXF1-205ENST00000527497 SLC4A3P48751 1232 aa8.87□□□□□ -0.99
NXF1-205ENST00000527497 ATP1A2P50993 1020 aa8.87□□□□□ -0.99
NXF1-205ENST00000527497 EML3Q32P44 896 aa8.87□□□□□ -0.99
NXF1-205ENST00000527497 SWT1Q5T5J6 900 aaKnown RBP8.87□□□□□ -0.99
NXF1-205ENST00000527497 PLPP7Q8NBV4 271 aa8.87□□□□□ -0.99
NXF1-205ENST00000527497 SLC39A7Q92504 469 aa8.87□□□□□ -0.99
NXF1-205ENST00000527497 CEP126Q9P2H0 1117 aa8.87□□□□□ -0.99
NXF1-205ENST00000527497 C21orf2O43822 256 aa8.86□□□□□ -0.99
NXF1-205ENST00000527497 ZNF211Q13398 564 aaPredicted RBP8.86□□□□□ -0.99
NXF1-205ENST00000527497 MAP7D1Q3KQU3 841 aa8.86□□□□□ -0.99
NXF1-205ENST00000527497 EAPPQ56P03 285 aaPredicted RBP8.86□□□□□ -0.99
NXF1-205ENST00000527497 CXXC1Q9P0U4 656 aaPredicted RBP8.86□□□□□ -0.99
NXF1-205ENST00000527497 POTEFA5A3E0 1075 aa8.85□□□□□ -0.99
NXF1-205ENST00000527497 SCAMP3O14828 347 aaKnown RBP8.85□□□□□ -0.99
NXF1-205ENST00000527497 DNAAF2Q9NVR5 837 aaKnown RBP8.85□□□□□ -0.99
NXF1-205ENST00000527497 ARSIQ5FYB1 569 aa8.84□□□□□ -0.99
NXF1-205ENST00000527497 PHTF2Q8N3S3 785 aa8.84□□□□□ -0.99
NXF1-205ENST00000527497 LARGE2Q8N3Y3 721 aa8.84□□□□□ -0.99
NXF1-205ENST00000527497 KHSRPQ92945 711 aaKnown RBP eCLIP8.84□□□□□ -0.99
NXF1-205ENST00000527497 ZNF594Q96JF6 807 aaPredicted RBP8.84□□□□□ -0.99
NXF1-205ENST00000527497 CHIC2Q9UKJ5 165 aa8.84□□□□□ -0.99
NXF1-205ENST00000527497 PRMT3O60678 531 aa8.83□□□□□ -1
NXF1-205ENST00000527497 CLDN10P78369 228 aa8.83□□□□□ -1
NXF1-205ENST00000527497 OCLNQ16625 522 aa8.83□□□□□ -1
NXF1-205ENST00000527497 ZSWIM6Q9HCJ5 1215 aa8.83□□□□□ -1
NXF1-205ENST00000527497 ANKRD62A6NC57 917 aa8.82□□□□□ -1
NXF1-205ENST00000527497 HDGFP51858 240 aaKnown RBP8.82□□□□□ -1
NXF1-205ENST00000527497 KCNH2Q12809 1159 aa8.82□□□□□ -1
NXF1-205ENST00000527497 SF3B2Q13435 895 aaKnown RBP8.82□□□□□ -1
NXF1-205ENST00000527497 DOK7Q18PE1 504 aa8.82□□□□□ -1
NXF1-205ENST00000527497 Q3C1V9 767 aa8.82□□□□□ -1
NXF1-205ENST00000527497 RGL4Q8IZJ4 473 aa8.82□□□□□ -1
NXF1-205ENST00000527497 SIX5Q8N196 739 aa8.82□□□□□ -1
NXF1-205ENST00000527497 BACH2Q9BYV9 841 aa8.82□□□□□ -1
NXF1-205ENST00000527497 ANO2Q9NQ90 1003 aa8.82□□□□□ -1
NXF1-205ENST00000527497 NOD1Q9Y239 953 aa8.82□□□□□ -1
NXF1-205ENST00000527497 GPSM3Q9Y4H4 160 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms