RNA–Protein interactions for RNA: ENST00000527356.1

CCDC84-204, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,781 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-204ENST00000527356 MED14O60244 1454 aa11.14□□□□□ -0.63
CCDC84-204ENST00000527356 COL3A1P02461 1466 aaPredicted RBP11.14□□□□□ -0.63
CCDC84-204ENST00000527356 PIK3C2BO00750 1634 aa11.14□□□□□ -0.63
CCDC84-204ENST00000527356 VGFO15240 615 aaPredicted RBP11.13□□□□□ -0.63
CCDC84-204ENST00000527356 TMPOP42166 694 aaKnown RBP11.13□□□□□ -0.63
CCDC84-204ENST00000527356 C22orf23Q9BZE7 217 aa11.13□□□□□ -0.63
CCDC84-204ENST00000527356 TRIM35Q9UPQ4 493 aa11.13□□□□□ -0.63
CCDC84-204ENST00000527356 ARHGEF28Q8N1W1 1705 aaKnown RBP11.13□□□□□ -0.63
CCDC84-204ENST00000527356 ZFYVE9O95405 1425 aa11.13□□□□□ -0.63
CCDC84-204ENST00000527356 CD109Q6YHK3 1445 aa11.13□□□□□ -0.63
CCDC84-204ENST00000527356 ABCC3O15438 1527 aa11.13□□□□□ -0.63
CCDC84-204ENST00000527356 FSD2A1L4K1 749 aa11.13□□□□□ -0.63
CCDC84-204ENST00000527356 TRIM27P14373 513 aa11.13□□□□□ -0.63
CCDC84-204ENST00000527356 MCM4P33991 863 aa11.13□□□□□ -0.63
CCDC84-204ENST00000527356 ATF7IPQ6VMQ6 1270 aa11.13□□□□□ -0.63
CCDC84-204ENST00000527356 RSPH6AQ9H0K4 717 aa11.13□□□□□ -0.63
CCDC84-204ENST00000527356 CHMP5Q9NZZ3 219 aa11.13□□□□□ -0.63
CCDC84-204ENST00000527356 POGZQ7Z3K3 1410 aa11.13□□□□□ -0.63
CCDC84-204ENST00000527356 EXOSC9Q06265 439 aaKnown RBP11.12□□□□□ -0.63
CCDC84-204ENST00000527356 SMC4Q9NTJ3 1288 aa11.12□□□□□ -0.63
CCDC84-204ENST00000527356 NEXMIFQ5QGS0 1516 aa11.12□□□□□ -0.63
CCDC84-204ENST00000527356 SSH1Q8WYL5 1049 aa11.11□□□□□ -0.63
CCDC84-204ENST00000527356 CFAP74Q9C0B2 1584 aa11.11□□□□□ -0.63
CCDC84-204ENST00000527356 CAMSAP1Q5T5Y3 1602 aa11.11□□□□□ -0.63
CCDC84-204ENST00000527356 TSR2Q969E8 191 aaKnown RBP11.11□□□□□ -0.63
CCDC84-204ENST00000527356 PNNQ9H307 717 aaKnown RBP11.11□□□□□ -0.63
CCDC84-204ENST00000527356 ZBTB40Q9NUA8 1239 aa11.11□□□□□ -0.63
CCDC84-204ENST00000527356 ARHGAP31Q2M1Z3 1444 aa11.1□□□□□ -0.63
CCDC84-204ENST00000527356 NCOA3Q9Y6Q9 1424 aa11.1□□□□□ -0.63
CCDC84-204ENST00000527356 IPO8O15397 1037 aaKnown RBP11.1□□□□□ -0.63
CCDC84-204ENST00000527356 PRKCSHP14314 528 aaPredicted RBP11.1□□□□□ -0.63
CCDC84-204ENST00000527356 RBM25P49756 843 aaKnown RBP11.1□□□□□ -0.63
CCDC84-204ENST00000527356 BRPF1P55201 1214 aaPredicted RBP11.1□□□□□ -0.63
CCDC84-204ENST00000527356 ALDH1L2Q3SY69 923 aa11.1□□□□□ -0.63
CCDC84-204ENST00000527356 CYB5RLQ6IPT4 315 aa11.1□□□□□ -0.63
CCDC84-204ENST00000527356 SNX21Q969T3 373 aa11.1□□□□□ -0.63
CCDC84-204ENST00000527356 A0A1W2PP64 1363 aa11.1□□□□□ -0.63
CCDC84-204ENST00000527356 PNPLA6Q8IY17 1366 aa11.1□□□□□ -0.63
CCDC84-204ENST00000527356 DDIT3P35638 169 aa11.09□□□□□ -0.63
CCDC84-204ENST00000527356 ZNF428Q96B54 188 aa11.09□□□□□ -0.63
CCDC84-204ENST00000527356 ZNF692Q9BU19 519 aaPredicted RBP11.09□□□□□ -0.63
CCDC84-204ENST00000527356 CABP2Q9NPB3 220 aa11.09□□□□□ -0.63
CCDC84-204ENST00000527356 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.09□□□□□ -0.63
CCDC84-204ENST00000527356 NOB1Q9ULX3 412 aaKnown RBP11.09□□□□□ -0.63
CCDC84-204ENST00000527356 KIF16BQ96L93 1317 aa11.09□□□□□ -0.63
CCDC84-204ENST00000527356 GOLGA6L3A6NEY3 463 aa11.08□□□□□ -0.64
CCDC84-204ENST00000527356 NUCB1Q02818 461 aa11.08□□□□□ -0.64
CCDC84-204ENST00000527356 ITPRIPQ8IWB1 547 aa11.08□□□□□ -0.64
CCDC84-204ENST00000527356 ATAD2Q6PL18 1390 aa11.08□□□□□ -0.64
CCDC84-204ENST00000527356 ANKRD26Q9UPS8 1709 aa11.08□□□□□ -0.64
CCDC84-204ENST00000527356 XRCC6P12956 609 aaKnown RBP eCLIP11.08□□□□□ -0.64
CCDC84-204ENST00000527356 MFAP1P55081 439 aaKnown RBP11.08□□□□□ -0.64
CCDC84-204ENST00000527356 GGT6Q6P531 493 aa11.08□□□□□ -0.64
CCDC84-204ENST00000527356 TMEM57Q8N5G2 664 aa11.08□□□□□ -0.64
CCDC84-204ENST00000527356 CDC42BPGQ6DT37 1551 aa11.07□□□□□ -0.64
CCDC84-204ENST00000527356 SIGLEC1Q9BZZ2 1709 aa11.07□□□□□ -0.64
CCDC84-204ENST00000527356 FYB1O15117 783 aa11.07□□□□□ -0.64
CCDC84-204ENST00000527356 HSCBQ8IWL3 235 aa11.07□□□□□ -0.64
CCDC84-204ENST00000527356 TERF2IPQ9NYB0 399 aa11.07□□□□□ -0.64
CCDC84-204ENST00000527356 ISY1Q9ULR0 285 aaKnown RBP11.07□□□□□ -0.64
CCDC84-204ENST00000527356 PPIP5K1Q6PFW1 1433 aa11.07□□□□□ -0.64
CCDC84-204ENST00000527356 CD163L1Q9NR16 1453 aa11.06□□□□□ -0.64
CCDC84-204ENST00000527356 DDX11L8A8MPP1 907 aa11.06□□□□□ -0.64
CCDC84-204ENST00000527356 U2SURPO15042 1029 aaKnown RBP11.06□□□□□ -0.64
CCDC84-204ENST00000527356 TRAK2O60296 914 aa11.06□□□□□ -0.64
CCDC84-204ENST00000527356 RIPK4P57078 832 aa11.06□□□□□ -0.64
CCDC84-204ENST00000527356 CIZ1Q9ULV3 898 aaPredicted RBP11.06□□□□□ -0.64
CCDC84-204ENST00000527356 CLTCQ00610 1675 aaKnown RBP11.06□□□□□ -0.64
CCDC84-204ENST00000527356 FCHSD2O94868 740 aa11.05□□□□□ -0.64
CCDC84-204ENST00000527356 CHMP4BQ9H444 224 aaKnown RBP11.05□□□□□ -0.64
CCDC84-204ENST00000527356 RRAGDQ9NQL2 400 aaPredicted RBP11.05□□□□□ -0.64
CCDC84-204ENST00000527356 PTPRMP28827 1452 aa11.05□□□□□ -0.64
CCDC84-204ENST00000527356 DIAPH1O60610 1272 aaKnown RBP11.05□□□□□ -0.64
CCDC84-204ENST00000527356 CHD1LQ86WJ1 897 aa11.05□□□□□ -0.64
CCDC84-204ENST00000527356 ARHGAP45Q92619 1136 aa11.05□□□□□ -0.64
CCDC84-204ENST00000527356 GGNBP2Q9H3C7 697 aa11.05□□□□□ -0.64
CCDC84-204ENST00000527356 SLC52A1Q9NWF4 448 aa11.05□□□□□ -0.64
CCDC84-204ENST00000527356 PIK3R4Q99570 1358 aa11.04□□□□□ -0.64
CCDC84-204ENST00000527356 MRE11P49959 708 aa11.04□□□□□ -0.64
CCDC84-204ENST00000527356 BMP2KLQ5H9B9 411 aa11.04□□□□□ -0.64
CCDC84-204ENST00000527356 SRPK2P78362 688 aaKnown RBP11.03□□□□□ -0.64
CCDC84-204ENST00000527356 GCC1Q96CN9 775 aa11.03□□□□□ -0.64
CCDC84-204ENST00000527356 PTMSP20962 102 aa11.03□□□□□ -0.64
CCDC84-204ENST00000527356 IDI1Q13907 227 aa11.03□□□□□ -0.64
CCDC84-204ENST00000527356 SPRYD3Q8NCJ5 442 aa11.03□□□□□ -0.64
CCDC84-204ENST00000527356 FAM135BQ49AJ0 1406 aa11.02□□□□□ -0.64
CCDC84-204ENST00000527356 REREQ9P2R6 1566 aa11.02□□□□□ -0.65
CCDC84-204ENST00000527356 ZBTB7BO15156 539 aaPredicted RBP11.02□□□□□ -0.65
CCDC84-204ENST00000527356 PTCH1Q13635 1447 aa11.02□□□□□ -0.65
CCDC84-204ENST00000527356 NEO1Q92859 1461 aa11.02□□□□□ -0.65
CCDC84-204ENST00000527356 CLCN1P35523 988 aa11.01□□□□□ -0.65
CCDC84-204ENST00000527356 HDGFL2Q7Z4V5 671 aaPredicted RBP11.01□□□□□ -0.65
CCDC84-204ENST00000527356 YTHDC2Q9H6S0 1430 aaKnown RBP11.01□□□□□ -0.65
CCDC84-204ENST00000527356 ARHGEF40Q8TER5 1519 aa11.01□□□□□ -0.65
CCDC84-204ENST00000527356 NPM1P06748 294 aaKnown RBP eCLIP11□□□□□ -0.65
CCDC84-204ENST00000527356 CALD1Q05682 793 aaKnown RBP11□□□□□ -0.65
CCDC84-204ENST00000527356 RAB3GAP1Q15042 981 aa11□□□□□ -0.65
CCDC84-204ENST00000527356 NUTM2DQ5VT03 806 aaPredicted RBP11□□□□□ -0.65
CCDC84-204ENST00000527356 MRPL50Q8N5N7 158 aaKnown RBP11□□□□□ -0.65
CCDC84-204ENST00000527356 KIF2CQ99661 725 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms