RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 CDK19Q9BWU1 502 aa13.87□□□□□ -0.19
PTPMT1-204ENST00000527079 IL16Q14005 1332 aa13.87□□□□□ -0.19
PTPMT1-204ENST00000527079 ZMYM3Q14202 1370 aa13.87□□□□□ -0.19
PTPMT1-204ENST00000527079 PNPLA6Q8IY17 1366 aa13.87□□□□□ -0.19
PTPMT1-204ENST00000527079 A2ML1A8K2U0 1454 aa13.86□□□□□ -0.19
PTPMT1-204ENST00000527079 TMPOP42166 694 aaKnown RBP13.86□□□□□ -0.19
PTPMT1-204ENST00000527079 ATP7BP35670 1465 aa13.86□□□□□ -0.19
PTPMT1-204ENST00000527079 U2SURPO15042 1029 aaKnown RBP13.85□□□□□ -0.19
PTPMT1-204ENST00000527079 DAXXQ9UER7 740 aaPredicted RBP13.85□□□□□ -0.19
PTPMT1-204ENST00000527079 SETD1AO15047 1707 aaKnown RBP13.85□□□□□ -0.19
PTPMT1-204ENST00000527079 DIAPH1O60610 1272 aaKnown RBP13.84□□□□□ -0.19
PTPMT1-204ENST00000527079 CDC42BPGQ6DT37 1551 aa13.84□□□□□ -0.19
PTPMT1-204ENST00000527079 TSPOAP1O95153 1857 aa13.84□□□□□ -0.19
PTPMT1-204ENST00000527079 RIMBP3CA6NJZ7 1639 aa13.84□□□□□ -0.19
PTPMT1-204ENST00000527079 RIMBP3BA6NNM3 1639 aa13.84□□□□□ -0.19
PTPMT1-204ENST00000527079 RIMBP3Q9UFD9 1639 aa13.84□□□□□ -0.19
PTPMT1-204ENST00000527079 RLBP1P12271 317 aa13.84□□□□□ -0.19
PTPMT1-204ENST00000527079 ZKSCAN2Q63HK3 967 aa13.84□□□□□ -0.19
PTPMT1-204ENST00000527079 BCL11AQ9H165 835 aa13.84□□□□□ -0.19
PTPMT1-204ENST00000527079 RIMS2Q9UQ26 1411 aa13.83□□□□□ -0.19
PTPMT1-204ENST00000527079 CABP1Q9NZU7 370 aa13.83□□□□□ -0.2
PTPMT1-204ENST00000527079 TRIM35Q9UPQ4 493 aa13.83□□□□□ -0.2
PTPMT1-204ENST00000527079 MVPQ14764 893 aaKnown RBP13.83□□□□□ -0.2
PTPMT1-204ENST00000527079 RWDD1Q9H446 243 aaPredicted RBP13.83□□□□□ -0.2
PTPMT1-204ENST00000527079 LAS1LQ9Y4W2 734 aaKnown RBP13.83□□□□□ -0.2
PTPMT1-204ENST00000527079 NEFMP07197 916 aa13.82□□□□□ -0.2
PTPMT1-204ENST00000527079 BCL2L13Q9BXK5 485 aa13.82□□□□□ -0.2
PTPMT1-204ENST00000527079 SENP3Q9H4L4 574 aaPredicted RBP13.82□□□□□ -0.2
PTPMT1-204ENST00000527079 PCDHB15Q9Y5E8 787 aa13.82□□□□□ -0.2
PTPMT1-204ENST00000527079 DZIP1LQ8IYY4 767 aaKnown RBP13.81□□□□□ -0.2
PTPMT1-204ENST00000527079 FCHSD2O94868 740 aa13.81□□□□□ -0.2
PTPMT1-204ENST00000527079 FTSJ3Q8IY81 847 aaKnown RBP13.8□□□□□ -0.2
PTPMT1-204ENST00000527079 RIPK4P57078 832 aa13.8□□□□□ -0.2
PTPMT1-204ENST00000527079 EXOSC9Q06265 439 aaKnown RBP13.8□□□□□ -0.2
PTPMT1-204ENST00000527079 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.8□□□□□ -0.2
PTPMT1-204ENST00000527079 TSR2Q969E8 191 aaKnown RBP13.8□□□□□ -0.2
PTPMT1-204ENST00000527079 TNNQ9UQP3 1299 aa13.8□□□□□ -0.2
PTPMT1-204ENST00000527079 SMC4Q9NTJ3 1288 aa13.79□□□□□ -0.2
PTPMT1-204ENST00000527079 MAP2P11137 1827 aaKnown RBP13.78□□□□□ -0.2
PTPMT1-204ENST00000527079 NRXN3Q9Y4C0 1643 aa13.78□□□□□ -0.2
PTPMT1-204ENST00000527079 LRRC7Q96NW7 1537 aa13.78□□□□□ -0.2
PTPMT1-204ENST00000527079 DDX19BQ9UMR2 479 aa13.78□□□□□ -0.2
PTPMT1-204ENST00000527079 EDC4Q6P2E9 1401 aaKnown RBP13.77□□□□□ -0.2
PTPMT1-204ENST00000527079 KNDC1Q76NI1 1749 aa13.77□□□□□ -0.2
PTPMT1-204ENST00000527079 ATF7IPQ6VMQ6 1270 aa13.77□□□□□ -0.21
PTPMT1-204ENST00000527079 WAPLQ7Z5K2 1190 aa13.77□□□□□ -0.21
PTPMT1-204ENST00000527079 SSH1Q8WYL5 1049 aa13.77□□□□□ -0.21
PTPMT1-204ENST00000527079 SIRT1Q96EB6 747 aa13.77□□□□□ -0.21
PTPMT1-204ENST00000527079 CPSF1Q10570 1443 aaKnown RBP13.77□□□□□ -0.21
PTPMT1-204ENST00000527079 FAM135BQ49AJ0 1406 aa13.77□□□□□ -0.21
PTPMT1-204ENST00000527079 ZNF428Q96B54 188 aa13.76□□□□□ -0.21
PTPMT1-204ENST00000527079 POLKQ9UBT6 870 aa13.76□□□□□ -0.21
PTPMT1-204ENST00000527079 PDZRN3Q9UPQ7 1066 aa13.76□□□□□ -0.21
PTPMT1-204ENST00000527079 USP19O94966 1318 aa13.76□□□□□ -0.21
PTPMT1-204ENST00000527079 KIF16BQ96L93 1317 aa13.76□□□□□ -0.21
PTPMT1-204ENST00000527079 WASLO00401 505 aaPredicted RBP13.76□□□□□ -0.21
PTPMT1-204ENST00000527079 TRIM27P14373 513 aa13.76□□□□□ -0.21
PTPMT1-204ENST00000527079 ALDH1L2Q3SY69 923 aa13.76□□□□□ -0.21
PTPMT1-204ENST00000527079 RSPH6AQ9H0K4 717 aa13.76□□□□□ -0.21
PTPMT1-204ENST00000527079 PPIP5K1Q6PFW1 1433 aa13.75□□□□□ -0.21
PTPMT1-204ENST00000527079 IPO8O15397 1037 aaKnown RBP13.75□□□□□ -0.21
PTPMT1-204ENST00000527079 HDGFP51858 240 aaKnown RBP13.75□□□□□ -0.21
PTPMT1-204ENST00000527079 HDAC1Q13547 482 aaPredicted RBP13.75□□□□□ -0.21
PTPMT1-204ENST00000527079 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.75□□□□□ -0.21
PTPMT1-204ENST00000527079 AATKQ6ZMQ8 1374 aa13.75□□□□□ -0.21
PTPMT1-204ENST00000527079 TECPR2O15040 1411 aa13.74□□□□□ -0.21
PTPMT1-204ENST00000527079 SLC4A3P48751 1232 aa13.74□□□□□ -0.21
PTPMT1-204ENST00000527079 CALD1Q05682 793 aaKnown RBP13.74□□□□□ -0.21
PTPMT1-204ENST00000527079 CDK12Q9NYV4 1490 aaPredicted RBP13.74□□□□□ -0.21
PTPMT1-204ENST00000527079 UPF2Q9HAU5 1272 aaKnown RBP13.74□□□□□ -0.21
PTPMT1-204ENST00000527079 PRKAR2BP31323 418 aa13.73□□□□□ -0.21
PTPMT1-204ENST00000527079 BRPF1P55201 1214 aaPredicted RBP13.73□□□□□ -0.21
PTPMT1-204ENST00000527079 NOB1Q9ULX3 412 aaKnown RBP13.73□□□□□ -0.21
PTPMT1-204ENST00000527079 MON2Q7Z3U7 1717 aa13.73□□□□□ -0.21
PTPMT1-204ENST00000527079 NFKBIBQ15653 356 aa13.73□□□□□ -0.21
PTPMT1-204ENST00000527079 NFE2L2Q16236 605 aa13.73□□□□□ -0.21
PTPMT1-204ENST00000527079 ESF1Q9H501 851 aaKnown RBP13.73□□□□□ -0.21
PTPMT1-204ENST00000527079 METP08581 1390 aa13.72□□□□□ -0.21
PTPMT1-204ENST00000527079 CPS1P31327 1500 aa13.72□□□□□ -0.21
PTPMT1-204ENST00000527079 MLECQ14165 292 aa13.72□□□□□ -0.21
PTPMT1-204ENST00000527079 BECN1Q14457 450 aa13.72□□□□□ -0.21
PTPMT1-204ENST00000527079 ITPRIPQ8IWB1 547 aa13.72□□□□□ -0.21
PTPMT1-204ENST00000527079 SEC24BO95487 1268 aa13.71□□□□□ -0.21
PTPMT1-204ENST00000527079 AKAP12Q02952 1782 aa13.71□□□□□ -0.22
PTPMT1-204ENST00000527079 IL13P35225 146 aa13.7□□□□□ -0.22
PTPMT1-204ENST00000527079 NUDT16Q96DE0 195 aaKnown RBP13.7□□□□□ -0.22
PTPMT1-204ENST00000527079 CCDC61Q9Y6R9 512 aa13.7□□□□□ -0.22
PTPMT1-204ENST00000527079 ZBTB40Q9NUA8 1239 aa13.7□□□□□ -0.22
PTPMT1-204ENST00000527079 ITSN1Q15811 1721 aa13.69□□□□□ -0.22
PTPMT1-204ENST00000527079 TMEM57Q8N5G2 664 aa13.69□□□□□ -0.22
PTPMT1-204ENST00000527079 COG3Q96JB2 828 aa13.69□□□□□ -0.22
PTPMT1-204ENST00000527079 ZNF692Q9BU19 519 aaPredicted RBP13.69□□□□□ -0.22
PTPMT1-204ENST00000527079 KIF13AQ9H1H9 1805 aa13.69□□□□□ -0.22
PTPMT1-204ENST00000527079 GNAI1P63096 354 aa13.69□□□□□ -0.22
PTPMT1-204ENST00000527079 TXNDC2Q86VQ3 553 aa13.69□□□□□ -0.22
PTPMT1-204ENST00000527079 SMC5Q8IY18 1101 aa13.69□□□□□ -0.22
PTPMT1-204ENST00000527079 TBC1D32Q96NH3 1257 aa13.69□□□□□ -0.22
PTPMT1-204ENST00000527079 CHMP4BQ9H444 224 aaKnown RBP13.69□□□□□ -0.22
PTPMT1-204ENST00000527079 IFT57Q9NWB7 429 aa13.69□□□□□ -0.22
PTPMT1-204ENST00000527079 C3P01024 1663 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms