RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 MRGPRX2Q96LB1 330 aa12.65□□□□□ -0.38
COPB1-204ENST00000526191 SH3BP2P78314 561 aa12.64□□□□□ -0.39
COPB1-204ENST00000526191 PPP2R2DQ66LE6 453 aa12.64□□□□□ -0.39
COPB1-204ENST00000526191 BAP1Q92560 729 aa12.64□□□□□ -0.39
COPB1-204ENST00000526191 TOR4AQ9NXH8 423 aa12.64□□□□□ -0.39
COPB1-204ENST00000526191 CTDSPL2Q05D32 466 aa12.63□□□□□ -0.39
COPB1-204ENST00000526191 CYP4X1Q8N118 509 aa12.63□□□□□ -0.39
COPB1-204ENST00000526191 TRAF7Q6Q0C0 670 aa12.62□□□□□ -0.39
COPB1-204ENST00000526191 PKDCCQ504Y2 493 aa12.61□□□□□ -0.39
COPB1-204ENST00000526191 PCMTD1Q96MG8 357 aaPredicted RBP12.61□□□□□ -0.39
COPB1-204ENST00000526191 GOPCQ9HD26 462 aa12.61□□□□□ -0.39
COPB1-204ENST00000526191 TTC24A2A3L6 582 aaPredicted RBP12.59□□□□□ -0.39
COPB1-204ENST00000526191 DGAT1O75907 488 aa12.59□□□□□ -0.39
COPB1-204ENST00000526191 ZNF511Q8NB15 262 aa12.59□□□□□ -0.39
COPB1-204ENST00000526191 LRRN4Q8WUT4 740 aa12.58□□□□□ -0.4
COPB1-204ENST00000526191 AP1G2O75843 785 aa12.57□□□□□ -0.4
COPB1-204ENST00000526191 EHBP1Q8NDI1 1231 aa12.57□□□□□ -0.4
COPB1-204ENST00000526191 SNIP1Q8TAD8 396 aaKnown RBP12.57□□□□□ -0.4
COPB1-204ENST00000526191 RFC5P40937 340 aa12.56□□□□□ -0.4
COPB1-204ENST00000526191 J3QL48 77 aa12.55□□□□□ -0.4
COPB1-204ENST00000526191 SMPD1P17405 629 aa12.55□□□□□ -0.4
COPB1-204ENST00000526191 MYT1Q01538 1121 aa12.55□□□□□ -0.4
COPB1-204ENST00000526191 SIAH2O43255 324 aa12.54□□□□□ -0.4
COPB1-204ENST00000526191 FOXJ1Q92949 421 aa12.54□□□□□ -0.4
COPB1-204ENST00000526191 USP17L8P0C7I0 530 aa12.51□□□□□ -0.41
COPB1-204ENST00000526191 ST8SIA5O15466 376 aa12.5□□□□□ -0.41
COPB1-204ENST00000526191 ALDH1A1P00352 501 aa12.5□□□□□ -0.41
COPB1-204ENST00000526191 NR6A1Q15406 480 aa12.5□□□□□ -0.41
COPB1-204ENST00000526191 C4orf48Q5BLP8 95 aa12.49□□□□□ -0.41
COPB1-204ENST00000526191 HMX1Q9NP08 348 aaPredicted RBP12.49□□□□□ -0.41
COPB1-204ENST00000526191 TLL2Q9Y6L7 1015 aa12.49□□□□□ -0.41
COPB1-204ENST00000526191 AVPP01185 164 aa12.48□□□□□ -0.41
COPB1-204ENST00000526191 VARSP26640 1264 aaKnown RBP12.48□□□□□ -0.41
COPB1-204ENST00000526191 EPS8L1Q8TE68 723 aa12.48□□□□□ -0.41
COPB1-204ENST00000526191 ARMC2Q8NEN0 867 aa12.47□□□□□ -0.41
COPB1-204ENST00000526191 AGERQ15109 404 aa12.46□□□□□ -0.41
COPB1-204ENST00000526191 NBPF14Q5TI25 921 aa12.46□□□□□ -0.41
COPB1-204ENST00000526191 HPS1Q92902 700 aa12.46□□□□□ -0.41
COPB1-204ENST00000526191 AAASQ9NRG9 546 aa12.46□□□□□ -0.41
COPB1-204ENST00000526191 TMEM259Q4ZIN3 620 aa12.44□□□□□ -0.42
COPB1-204ENST00000526191 SH3BP5LQ7L8J4 393 aa12.43□□□□□ -0.42
COPB1-204ENST00000526191 SH3RF1Q7Z6J0 888 aa12.43□□□□□ -0.42
COPB1-204ENST00000526191 BPHLQ86WA6 291 aaPredicted RBP12.43□□□□□ -0.42
COPB1-204ENST00000526191 FAM174AQ8TBP5 190 aa12.43□□□□□ -0.42
COPB1-204ENST00000526191 DACH1Q9UI36 760 aa12.43□□□□□ -0.42
COPB1-204ENST00000526191 FKBPLQ9UIM3 349 aa12.43□□□□□ -0.42
COPB1-204ENST00000526191 CRIPAKQ8N1N5 446 aa12.42□□□□□ -0.42
COPB1-204ENST00000526191 AXIN1O15169 862 aa12.41□□□□□ -0.42
COPB1-204ENST00000526191 WASF2Q9Y6W5 498 aa12.41□□□□□ -0.42
COPB1-204ENST00000526191 MAGEB6P1A0A0J9YX57 407 aa12.4□□□□□ -0.42
COPB1-204ENST00000526191 GPKOWQ92917 476 aaPredicted RBP eCLIP12.4□□□□□ -0.429e-9■□□□□ 8.3
COPB1-204ENST00000526191 CARD14Q9BXL6 1004 aa12.4□□□□□ -0.42
COPB1-204ENST00000526191 TRIM34Q9BYJ4 488 aa12.4□□□□□ -0.42
COPB1-204ENST00000526191 SMCPP49901 116 aaPredicted RBP12.39□□□□□ -0.43
COPB1-204ENST00000526191 CTC1Q2NKJ3 1217 aa12.39□□□□□ -0.43
COPB1-204ENST00000526191 MPNDQ8N594 471 aa12.39□□□□□ -0.43
COPB1-204ENST00000526191 C1QTNF2Q9BXJ5 285 aa12.39□□□□□ -0.43
COPB1-204ENST00000526191 ARID5BQ14865 1188 aa12.38□□□□□ -0.43
COPB1-204ENST00000526191 PDXDC2PQ6P474 469 aa12.38□□□□□ -0.43
COPB1-204ENST00000526191 POTECB2RU33 542 aa12.36□□□□□ -0.43
COPB1-204ENST00000526191 CDK15Q96Q40 435 aa12.36□□□□□ -0.43
COPB1-204ENST00000526191 ZC3H4Q9UPT8 1303 aaKnown RBP12.36□□□□□ -0.43
COPB1-204ENST00000526191 NNTQ13423 1086 aa12.35□□□□□ -0.43
COPB1-204ENST00000526191 ERFEQ4G0M1 354 aa12.35□□□□□ -0.43
COPB1-204ENST00000526191 ZNF787Q6DD87 383 aa12.35□□□□□ -0.43
COPB1-204ENST00000526191 GJD4Q96KN9 370 aaPredicted RBP12.35□□□□□ -0.43
COPB1-204ENST00000526191 OCSTAMPQ9BR26 566 aa12.35□□□□□ -0.43
COPB1-204ENST00000526191 ARHGAP9Q9BRR9 750 aa12.35□□□□□ -0.43
COPB1-204ENST00000526191 ADH1CP00326 375 aa12.34□□□□□ -0.43
COPB1-204ENST00000526191 SNRKQ9NRH2 765 aa12.33□□□□□ -0.44
COPB1-204ENST00000526191 TRMT44Q8IYL2 757 aaKnown RBP12.32□□□□□ -0.44
COPB1-204ENST00000526191 BANK1Q8NDB2 785 aa12.32□□□□□ -0.44
COPB1-204ENST00000526191 GRM5P41594 1212 aa12.31□□□□□ -0.44
COPB1-204ENST00000526191 MTMR14Q8NCE2 650 aa12.31□□□□□ -0.44
COPB1-204ENST00000526191 NR3C2P08235 984 aa12.3□□□□□ -0.44
COPB1-204ENST00000526191 PTK2Q05397 1052 aa12.3□□□□□ -0.44
COPB1-204ENST00000526191 ZBTB33Q86T24 672 aa12.3□□□□□ -0.44
COPB1-204ENST00000526191 PNMA1Q8ND90 353 aa12.3□□□□□ -0.44
COPB1-204ENST00000526191 GMPR2Q9P2T1 348 aaKnown RBP12.3□□□□□ -0.44
COPB1-204ENST00000526191 CAPN5O15484 640 aaPredicted RBP12.29□□□□□ -0.44
COPB1-204ENST00000526191 VASH1Q7L8A9 365 aaPredicted RBP12.29□□□□□ -0.44
COPB1-204ENST00000526191 ATP13A2Q9NQ11 1180 aa12.29□□□□□ -0.44
COPB1-204ENST00000526191 FSHRP23945 695 aa12.28□□□□□ -0.44
COPB1-204ENST00000526191 ADAM32Q8TC27 787 aa12.28□□□□□ -0.44
COPB1-204ENST00000526191 GPSM3Q9Y4H4 160 aa12.28□□□□□ -0.44
COPB1-204ENST00000526191 MAP4K5Q9Y4K4 846 aa12.28□□□□□ -0.44
COPB1-204ENST00000526191 TIMP2P16035 220 aa12.27□□□□□ -0.45
COPB1-204ENST00000526191 WDR4P57081 412 aaKnown RBP12.27□□□□□ -0.45
COPB1-204ENST00000526191 NR5A1Q13285 461 aa12.27□□□□□ -0.45
COPB1-204ENST00000526191 SLC10A4Q96EP9 437 aa12.26□□□□□ -0.45
COPB1-204ENST00000526191 KLF16Q9BXK1 252 aaPredicted RBP12.26□□□□□ -0.45
COPB1-204ENST00000526191 BMP1P13497 986 aa12.25□□□□□ -0.45
COPB1-204ENST00000526191 GPR37L1O60883 481 aa12.24□□□□□ -0.45
COPB1-204ENST00000526191 ZFAND3Q9H8U3 227 aa12.24□□□□□ -0.45
COPB1-204ENST00000526191 TRIM46Q7Z4K8 759 aa12.23□□□□□ -0.45
COPB1-204ENST00000526191 ITPKCQ96DU7 683 aa12.23□□□□□ -0.45
COPB1-204ENST00000526191 SOCS7O14512 581 aa12.22□□□□□ -0.45
COPB1-204ENST00000526191 ZIC2O95409 532 aaPredicted RBP12.22□□□□□ -0.45
COPB1-204ENST00000526191 FBXO45P0C2W1 286 aa12.21□□□□□ -0.45
COPB1-204ENST00000526191 KCTD15Q96SI1 283 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms