RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 EIF5BO60841 1220 aaKnown RBP10.06□□□□□ -0.8
BDNF-213ENST00000525950 BCL2L13Q9BXK5 485 aa10.06□□□□□ -0.8
BDNF-213ENST00000525950 TRAK1Q9UPV9 953 aa10.06□□□□□ -0.8
BDNF-213ENST00000525950 CD109Q6YHK3 1445 aa10.06□□□□□ -0.8
BDNF-213ENST00000525950 ANKRD26Q9UPS8 1709 aa10.06□□□□□ -0.8
BDNF-213ENST00000525950 PIK3C2BO00750 1634 aa10.06□□□□□ -0.8
BDNF-213ENST00000525950 U2AF1L5P0DN76 240 aaPredicted RBP10.06□□□□□ -0.8
BDNF-213ENST00000525950 U2AF1Q01081 240 aaKnown RBP eCLIP10.06□□□□□ -0.8
BDNF-213ENST00000525950 NUCB1Q02818 461 aa10.06□□□□□ -0.8
BDNF-213ENST00000525950 SKOR2Q2VWA4 1001 aaPredicted RBP10.06□□□□□ -0.8
BDNF-213ENST00000525950 PNNQ9H307 717 aaKnown RBP10.06□□□□□ -0.8
BDNF-213ENST00000525950 SMC4Q9NTJ3 1288 aa10.06□□□□□ -0.8
BDNF-213ENST00000525950 NPATQ14207 1427 aa10.06□□□□□ -0.8
BDNF-213ENST00000525950 TMPOP42166 694 aaKnown RBP10.06□□□□□ -0.8
BDNF-213ENST00000525950 ZFYVE9O95405 1425 aa10.05□□□□□ -0.8
BDNF-213ENST00000525950 CHMP4BQ9H444 224 aaKnown RBP10.05□□□□□ -0.8
BDNF-213ENST00000525950 TRIM35Q9UPQ4 493 aa10.05□□□□□ -0.8
BDNF-213ENST00000525950 PPIP5K1Q6PFW1 1433 aa10.05□□□□□ -0.8
BDNF-213ENST00000525950 MFAP1P55081 439 aaKnown RBP10.05□□□□□ -0.8
BDNF-213ENST00000525950 SSH1Q8WYL5 1049 aa10.05□□□□□ -0.8
BDNF-213ENST00000525950 EXOSC9Q06265 439 aaKnown RBP10.05□□□□□ -0.8
BDNF-213ENST00000525950 CDC42BPGQ6DT37 1551 aa10.05□□□□□ -0.8
BDNF-213ENST00000525950 HECW2Q9P2P5 1572 aa10.05□□□□□ -0.8
BDNF-213ENST00000525950 BMP2KLQ5H9B9 411 aa10.04□□□□□ -0.8
BDNF-213ENST00000525950 PNPLA6Q8IY17 1366 aa10.04□□□□□ -0.8
BDNF-213ENST00000525950 CLEC17AQ6ZS10 378 aa10.04□□□□□ -0.8
BDNF-213ENST00000525950 GRPEL1Q9HAV7 217 aa10.04□□□□□ -0.8
BDNF-213ENST00000525950 TNNT2P45379 298 aaPredicted RBP10.04□□□□□ -0.8
BDNF-213ENST00000525950 ARHGAP31Q2M1Z3 1444 aa10.04□□□□□ -0.8
BDNF-213ENST00000525950 MLH3Q9UHC1 1453 aa10.04□□□□□ -0.8
BDNF-213ENST00000525950 PIK3R4Q99570 1358 aa10.03□□□□□ -0.8
BDNF-213ENST00000525950 RAB3GAP1Q15042 981 aa10.03□□□□□ -0.8
BDNF-213ENST00000525950 CFAP74Q9C0B2 1584 aa10.03□□□□□ -0.8
BDNF-213ENST00000525950 ITPRIPQ8IWB1 547 aa10.03□□□□□ -0.8
BDNF-213ENST00000525950 GBP4Q96PP9 640 aa10.03□□□□□ -0.8
BDNF-213ENST00000525950 NEXMIFQ5QGS0 1516 aa10.02□□□□□ -0.8
BDNF-213ENST00000525950 ARHGAP45Q92619 1136 aa10.02□□□□□ -0.8
BDNF-213ENST00000525950 GCC1Q96CN9 775 aa10.02□□□□□ -0.8
BDNF-213ENST00000525950 NOB1Q9ULX3 412 aaKnown RBP10.02□□□□□ -0.8
BDNF-213ENST00000525950 CLTCQ00610 1675 aaKnown RBP10.02□□□□□ -0.81
BDNF-213ENST00000525950 ABCC3O15438 1527 aa10.02□□□□□ -0.81
BDNF-213ENST00000525950 VGFO15240 615 aaPredicted RBP10.02□□□□□ -0.81
BDNF-213ENST00000525950 TMEM57Q8N5G2 664 aa10.02□□□□□ -0.81
BDNF-213ENST00000525950 CAMSAP1Q5T5Y3 1602 aa10.02□□□□□ -0.81
BDNF-213ENST00000525950 FRMPD1Q5SYB0 1578 aa10.02□□□□□ -0.81
BDNF-213ENST00000525950 IBTKQ9P2D0 1353 aaPredicted RBP10.01□□□□□ -0.81
BDNF-213ENST00000525950 CHD1LQ86WJ1 897 aa10.01□□□□□ -0.81
BDNF-213ENST00000525950 TSR2Q969E8 191 aaKnown RBP10.01□□□□□ -0.81
BDNF-213ENST00000525950 CFAP44Q96MT7 982 aa10.01□□□□□ -0.81
BDNF-213ENST00000525950 PANK2Q9BZ23 570 aa10.01□□□□□ -0.81
BDNF-213ENST00000525950 ATAD2Q6PL18 1390 aa10.01□□□□□ -0.81
BDNF-213ENST00000525950 A0A1W2PP64 1363 aa10.01□□□□□ -0.81
BDNF-213ENST00000525950 TNPO1Q92973 898 aaKnown RBP10□□□□□ -0.81
BDNF-213ENST00000525950 PTCH1Q13635 1447 aa10□□□□□ -0.81
BDNF-213ENST00000525950 TMEM132EQ6IEE7 984 aa10□□□□□ -0.81
BDNF-213ENST00000525950 KIF2CQ99661 725 aa10□□□□□ -0.81
BDNF-213ENST00000525950 ESPNB1AK53 854 aa9.99□□□□□ -0.81
BDNF-213ENST00000525950 FCHSD2O94868 740 aa9.99□□□□□ -0.81
BDNF-213ENST00000525950 RRP9O43818 475 aaKnown RBP9.99□□□□□ -0.81
BDNF-213ENST00000525950 SPRYD3Q8NCJ5 442 aa9.99□□□□□ -0.81
BDNF-213ENST00000525950 GZF1Q9H116 711 aaPredicted RBP9.99□□□□□ -0.81
BDNF-213ENST00000525950 KIF24Q5T7B8 1368 aa9.99□□□□□ -0.81
BDNF-213ENST00000525950 ASXL2Q76L83 1435 aa9.99□□□□□ -0.81
BDNF-213ENST00000525950 POGZQ7Z3K3 1410 aa9.99□□□□□ -0.81
BDNF-213ENST00000525950 RIPK4P57078 832 aa9.98□□□□□ -0.81
BDNF-213ENST00000525950 CD163L1Q9NR16 1453 aa9.98□□□□□ -0.81
BDNF-213ENST00000525950 ZBTB7BO15156 539 aaPredicted RBP9.98□□□□□ -0.81
BDNF-213ENST00000525950 GLIPR1L2Q4G1C9 344 aa9.98□□□□□ -0.81
BDNF-213ENST00000525950 TERF2IPQ9NYB0 399 aa9.98□□□□□ -0.81
BDNF-213ENST00000525950 HSP90AB1P08238 724 aaKnown RBP9.98□□□□□ -0.81
BDNF-213ENST00000525950 CHGAP10645 457 aaKnown RBP9.98□□□□□ -0.81
BDNF-213ENST00000525950 K7ELQ4 463 aaPredicted RBP9.97□□□□□ -0.81
BDNF-213ENST00000525950 DIAPH1O60610 1272 aaKnown RBP9.97□□□□□ -0.81
BDNF-213ENST00000525950 CALD1Q05682 793 aaKnown RBP9.97□□□□□ -0.81
BDNF-213ENST00000525950 PPP1R9BQ96SB3 815 aa9.97□□□□□ -0.81
BDNF-213ENST00000525950 FAM135BQ49AJ0 1406 aa9.97□□□□□ -0.81
BDNF-213ENST00000525950 FYB1O15117 783 aa9.97□□□□□ -0.81
BDNF-213ENST00000525950 PLPPR3Q6T4P5 718 aa9.97□□□□□ -0.81
BDNF-213ENST00000525950 PTPRMP28827 1452 aa9.96□□□□□ -0.81
BDNF-213ENST00000525950 SIGLEC1Q9BZZ2 1709 aa9.96□□□□□ -0.81
BDNF-213ENST00000525950 U2SURPO15042 1029 aaKnown RBP9.96□□□□□ -0.81
BDNF-213ENST00000525950 CABP2Q9NPB3 220 aa9.96□□□□□ -0.81
BDNF-213ENST00000525950 YEATS2Q9ULM3 1422 aa9.96□□□□□ -0.81
BDNF-213ENST00000525950 NAP1L5Q96NT1 182 aaPredicted RBP9.96□□□□□ -0.82
BDNF-213ENST00000525950 HSP90AA1P07900 732 aaKnown RBP9.96□□□□□ -0.82
BDNF-213ENST00000525950 CCDC173Q0VFZ6 552 aa9.96□□□□□ -0.82
BDNF-213ENST00000525950 LNPKQ9C0E8 428 aa9.96□□□□□ -0.82
BDNF-213ENST00000525950 MRPL50Q8N5N7 158 aaKnown RBP9.95□□□□□ -0.82
BDNF-213ENST00000525950 KIF20BQ96Q89 1820 aa9.95□□□□□ -0.82
BDNF-213ENST00000525950 GOLGA6L22H0YM25 854 aa9.95□□□□□ -0.82
BDNF-213ENST00000525950 TPM2P07951 284 aa9.95□□□□□ -0.82
BDNF-213ENST00000525950 KLHL40Q2TBA0 621 aa9.95□□□□□ -0.82
BDNF-213ENST00000525950 GAS2L3Q86XJ1 694 aa9.95□□□□□ -0.82
BDNF-213ENST00000525950 TRIM44Q96DX7 344 aaPredicted RBP9.95□□□□□ -0.82
BDNF-213ENST00000525950 ABCC4O15439 1325 aa9.95□□□□□ -0.82
BDNF-213ENST00000525950 LRRC7Q96NW7 1537 aa9.94□□□□□ -0.82
BDNF-213ENST00000525950 TBC1D9Q6ZT07 1266 aa9.94□□□□□ -0.82
BDNF-213ENST00000525950 SLC52A1Q9NWF4 448 aa9.94□□□□□ -0.82
BDNF-213ENST00000525950 VAMP4O75379 141 aa9.94□□□□□ -0.82
BDNF-213ENST00000525950 TERF1P54274 439 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms