RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 BLMP54132 1417 aaPredicted RBP18.24■□□□□ 0.51
CLP1-202ENST00000525602 TOPAZ1Q8N9V7 1692 aa18.23■□□□□ 0.51
CLP1-202ENST00000525602 HAP1P54257 671 aaPredicted RBP18.23■□□□□ 0.51
CLP1-202ENST00000525602 PMFBP1Q8TBY8 1022 aa18.22■□□□□ 0.51
CLP1-202ENST00000525602 CDK19Q9BWU1 502 aa18.22■□□□□ 0.51
CLP1-202ENST00000525602 SEPT12Q8IYM1 358 aa18.21■□□□□ 0.51
CLP1-202ENST00000525602 CLSPNQ9HAW4 1339 aa18.21■□□□□ 0.51
CLP1-202ENST00000525602 ALS2Q96Q42 1657 aa18.21■□□□□ 0.51
CLP1-202ENST00000525602 SBNO1A3KN83 1393 aa18.2■□□□□ 0.5
CLP1-202ENST00000525602 CCDC125Q86Z20 511 aa18.2■□□□□ 0.5
CLP1-202ENST00000525602 NUDT16Q96DE0 195 aaKnown RBP18.2■□□□□ 0.5
CLP1-202ENST00000525602 CCDC9Q9Y3X0 531 aaKnown RBP18.2■□□□□ 0.5
CLP1-202ENST00000525602 CRYBG1Q9Y4K1 1723 aa18.2■□□□□ 0.5
CLP1-202ENST00000525602 VPS72Q15906 364 aa18.19■□□□□ 0.5
CLP1-202ENST00000525602 PSME1Q06323 249 aa18.18■□□□□ 0.5
CLP1-202ENST00000525602 ARHGEF10O15013 1369 aa18.18■□□□□ 0.5
CLP1-202ENST00000525602 CARD11Q9BXL7 1154 aa18.17■□□□□ 0.5
CLP1-202ENST00000525602 FAM83GA6ND36 823 aa18.17■□□□□ 0.5
CLP1-202ENST00000525602 COL14A1Q05707 1796 aaKnown RBP18.15■□□□□ 0.5
CLP1-202ENST00000525602 SRPK2P78362 688 aaKnown RBP18.15■□□□□ 0.5
CLP1-202ENST00000525602 NGDNQ8NEJ9 315 aaKnown RBP18.15■□□□□ 0.5
CLP1-202ENST00000525602 CCDC61Q9Y6R9 512 aa18.15■□□□□ 0.5
CLP1-202ENST00000525602 A0A0G2JS52 829 aa18.14■□□□□ 0.49
CLP1-202ENST00000525602 MYT1Q01538 1121 aa18.14■□□□□ 0.49
CLP1-202ENST00000525602 KRT27Q7Z3Y8 459 aa18.14■□□□□ 0.49
CLP1-202ENST00000525602 CABP2Q9NPB3 220 aa18.14■□□□□ 0.49
CLP1-202ENST00000525602 POLR3AO14802 1390 aaPredicted RBP18.13■□□□□ 0.49
CLP1-202ENST00000525602 EVC2Q86UK5 1308 aa18.13■□□□□ 0.49
CLP1-202ENST00000525602 FAM98CQ17RN3 349 aaKnown RBP18.13■□□□□ 0.49
CLP1-202ENST00000525602 PPIP5K1Q6PFW1 1433 aa18.13■□□□□ 0.49
CLP1-202ENST00000525602 SBNO2Q9Y2G9 1366 aa18.13■□□□□ 0.49
CLP1-202ENST00000525602 FAM182BQ5T319 152 aa18.12■□□□□ 0.49
CLP1-202ENST00000525602 BTG4Q9NY30 223 aa18.12■□□□□ 0.49
CLP1-202ENST00000525602 LRP5O75197 1615 aa18.12■□□□□ 0.49
CLP1-202ENST00000525602 THSD7AQ9UPZ6 1657 aa18.11■□□□□ 0.49
CLP1-202ENST00000525602 PLEKHG3A1L390 1219 aa18.11■□□□□ 0.49
CLP1-202ENST00000525602 ONECUT3O60422 494 aaPredicted RBP18.11■□□□□ 0.49
CLP1-202ENST00000525602 CCER1Q8TC90 406 aaPredicted RBP18.11■□□□□ 0.49
CLP1-202ENST00000525602 ACEP12821 1306 aa18.1■□□□□ 0.49
CLP1-202ENST00000525602 TNS1Q9HBL0 1735 aaKnown RBP18.1■□□□□ 0.49
CLP1-202ENST00000525602 PSDA5PKW4 1024 aaPredicted RBP18.1■□□□□ 0.49
CLP1-202ENST00000525602 SF3B2Q13435 895 aaKnown RBP18.1■□□□□ 0.49
CLP1-202ENST00000525602 TIMELESSQ9UNS1 1208 aa18.1■□□□□ 0.49
CLP1-202ENST00000525602 PHRF1Q9P1Y6 1649 aaKnown RBP18.09■□□□□ 0.49
CLP1-202ENST00000525602 RGPD1P0DJD0 1748 aa18.09■□□□□ 0.49
CLP1-202ENST00000525602 PAK3O75914 559 aaPredicted RBP18.06■□□□□ 0.48
CLP1-202ENST00000525602 CABP1Q9NZU7 370 aa18.04■□□□□ 0.48
CLP1-202ENST00000525602 SPATA31A5Q5VU36 1347 aa18.04■□□□□ 0.48
CLP1-202ENST00000525602 SPATA31A7Q8IWB4 1347 aa18.04■□□□□ 0.48
CLP1-202ENST00000525602 KIAA0232Q92628 1395 aa18.03■□□□□ 0.48
CLP1-202ENST00000525602 USP6P35125 1406 aa18.03■□□□□ 0.48
CLP1-202ENST00000525602 EN1Q05925 392 aaPredicted RBP18.03■□□□□ 0.48
CLP1-202ENST00000525602 AKAP12Q02952 1782 aa18.02■□□□□ 0.48
CLP1-202ENST00000525602 USP47Q96K76 1375 aa18.02■□□□□ 0.48
CLP1-202ENST00000525602 ST20-MTHFSA0A0A6YYL1 179 aa18.02■□□□□ 0.47
CLP1-202ENST00000525602 BAG6P46379 1132 aa18.02■□□□□ 0.47
CLP1-202ENST00000525602 CHRNA2Q15822 529 aa18.02■□□□□ 0.47
CLP1-202ENST00000525602 NUTM2GQ5VZR2 741 aa18.02■□□□□ 0.47
CLP1-202ENST00000525602 PRDM11Q9NQV5 511 aa18.02■□□□□ 0.47
CLP1-202ENST00000525602 BRD4O60885 1362 aaPredicted RBP18.01■□□□□ 0.47
CLP1-202ENST00000525602 NRKQ7Z2Y5 1582 aa18.01■□□□□ 0.47
CLP1-202ENST00000525602 TESK2Q96S53 571 aa18.01■□□□□ 0.47
CLP1-202ENST00000525602 SSH2Q76I76 1423 aa18■□□□□ 0.47
CLP1-202ENST00000525602 STRN4Q9NRL3 753 aa17.98■□□□□ 0.47
CLP1-202ENST00000525602 CPSF1Q10570 1443 aaKnown RBP17.98■□□□□ 0.47
CLP1-202ENST00000525602 PIK3C2AO00443 1686 aa17.97■□□□□ 0.47
CLP1-202ENST00000525602 ZC3H6P61129 1189 aaKnown RBP17.97■□□□□ 0.47
CLP1-202ENST00000525602 R3HDM1Q15032 1099 aaKnown RBP17.97■□□□□ 0.47
CLP1-202ENST00000525602 SPATA31A1Q5TZJ5 1347 aa17.97■□□□□ 0.47
CLP1-202ENST00000525602 MON2Q7Z3U7 1717 aa17.97■□□□□ 0.47
CLP1-202ENST00000525602 ABTB2Q8N961 1025 aa17.97■□□□□ 0.47
CLP1-202ENST00000525602 DISP2A7MBM2 1401 aa17.96■□□□□ 0.47
CLP1-202ENST00000525602 CD163L1Q9NR16 1453 aa17.95■□□□□ 0.46
CLP1-202ENST00000525602 USP19O94966 1318 aa17.95■□□□□ 0.46
CLP1-202ENST00000525602 EZH2Q15910 746 aaKnown RBP17.95■□□□□ 0.46
CLP1-202ENST00000525602 PUS7Q96PZ0 661 aaKnown RBP17.95■□□□□ 0.46
CLP1-202ENST00000525602 USP35Q9P2H5 1018 aa17.95■□□□□ 0.46
CLP1-202ENST00000525602 LMO7Q8WWI1 1683 aa17.95■□□□□ 0.46
CLP1-202ENST00000525602 SLC24A1O60721 1099 aa17.94■□□□□ 0.46
CLP1-202ENST00000525602 ZNF692Q9BU19 519 aaPredicted RBP17.94■□□□□ 0.46
CLP1-202ENST00000525602 CAMTA1Q9Y6Y1 1673 aa17.94■□□□□ 0.46
CLP1-202ENST00000525602 NUP188Q5SRE5 1749 aa17.94■□□□□ 0.46
CLP1-202ENST00000525602 KTN1Q86UP2 1357 aaKnown RBP17.94■□□□□ 0.46
CLP1-202ENST00000525602 RREB1Q92766 1687 aa17.94■□□□□ 0.46
CLP1-202ENST00000525602 TRIM37O94972 964 aa17.93■□□□□ 0.46
CLP1-202ENST00000525602 TTC21BQ7Z4L5 1316 aa17.93■□□□□ 0.46
CLP1-202ENST00000525602 NLRP13Q86W25 1043 aa17.92■□□□□ 0.46
CLP1-202ENST00000525602 TMC1Q8TDI8 760 aa17.92■□□□□ 0.46
CLP1-202ENST00000525602 SLIT3O75094 1523 aa17.92■□□□□ 0.46
CLP1-202ENST00000525602 NINLQ9Y2I6 1382 aa17.91■□□□□ 0.46
CLP1-202ENST00000525602 TTC21AQ8NDW8 1320 aa17.91■□□□□ 0.46
CLP1-202ENST00000525602 TMF1P82094 1093 aa17.91■□□□□ 0.46
CLP1-202ENST00000525602 SLC12A5Q9H2X9 1139 aa17.91■□□□□ 0.46
CLP1-202ENST00000525602 LARP1Q6PKG0 1096 aaKnown RBP17.9■□□□□ 0.46
CLP1-202ENST00000525602 A0A1W2PP64 1363 aa17.89■□□□□ 0.45
CLP1-202ENST00000525602 NLRP6P59044 892 aa17.89■□□□□ 0.45
CLP1-202ENST00000525602 HDGFL2Q7Z4V5 671 aaPredicted RBP17.89■□□□□ 0.45
CLP1-202ENST00000525602 CAMKK2Q96RR4 588 aa17.89■□□□□ 0.45
CLP1-202ENST00000525602 CPDO75976 1380 aa17.88■□□□□ 0.45
CLP1-202ENST00000525602 GCP02774 474 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms