RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 DGAT1O75907 488 aa12.35□□□□□ -0.43
COPB1-203ENST00000525214 CTHP32929 405 aa12.35□□□□□ -0.43
COPB1-203ENST00000525214 SH3BP2P78314 561 aa12.35□□□□□ -0.43
COPB1-203ENST00000525214 HELBQ8NG08 1087 aaPredicted RBP12.35□□□□□ -0.43
COPB1-203ENST00000525214 BAP1Q92560 729 aa12.35□□□□□ -0.43
COPB1-203ENST00000525214 LINC01559Q495D7 138 aa12.34□□□□□ -0.43
COPB1-203ENST00000525214 PKDCCQ504Y2 493 aa12.34□□□□□ -0.43
COPB1-203ENST00000525214 CYP4X1Q8N118 509 aa12.34□□□□□ -0.43
COPB1-203ENST00000525214 GOPCQ9HD26 462 aa12.34□□□□□ -0.43
COPB1-203ENST00000525214 CTDSPL2Q05D32 466 aa12.33□□□□□ -0.44
COPB1-203ENST00000525214 ZNF511Q8NB15 262 aa12.32□□□□□ -0.44
COPB1-203ENST00000525214 MYT1Q01538 1121 aa12.31□□□□□ -0.44
COPB1-203ENST00000525214 SNIP1Q8TAD8 396 aaKnown RBP12.31□□□□□ -0.44
COPB1-203ENST00000525214 ATP1B4Q9UN42 357 aaPredicted RBP12.3□□□□□ -0.44
COPB1-203ENST00000525214 TTC24A2A3L6 582 aaPredicted RBP12.29□□□□□ -0.44
COPB1-203ENST00000525214 SIAH2O43255 324 aa12.29□□□□□ -0.44
COPB1-203ENST00000525214 SMPD1P17405 629 aa12.29□□□□□ -0.44
COPB1-203ENST00000525214 J3QL48 77 aa12.28□□□□□ -0.44
COPB1-203ENST00000525214 EHBP1Q8NDI1 1231 aa12.28□□□□□ -0.44
COPB1-203ENST00000525214 LRRN4Q8WUT4 740 aa12.28□□□□□ -0.44
COPB1-203ENST00000525214 PCMTD1Q96MG8 357 aaPredicted RBP12.28□□□□□ -0.44
COPB1-203ENST00000525214 AVPP01185 164 aa12.26□□□□□ -0.45
COPB1-203ENST00000525214 RFC5P40937 340 aa12.26□□□□□ -0.45
COPB1-203ENST00000525214 AP1G2O75843 785 aa12.24□□□□□ -0.45
COPB1-203ENST00000525214 FOXJ1Q92949 421 aa12.24□□□□□ -0.45
COPB1-203ENST00000525214 ST8SIA5O15466 376 aa12.23□□□□□ -0.45
COPB1-203ENST00000525214 C4orf48Q5BLP8 95 aa12.22□□□□□ -0.45
COPB1-203ENST00000525214 AAASQ9NRG9 546 aa12.22□□□□□ -0.45
COPB1-203ENST00000525214 ALDH1A1P00352 501 aa12.21□□□□□ -0.45
COPB1-203ENST00000525214 USP17L8P0C7I0 530 aa12.21□□□□□ -0.45
COPB1-203ENST00000525214 VARSP26640 1264 aaKnown RBP12.21□□□□□ -0.45
COPB1-203ENST00000525214 CRIPAKQ8N1N5 446 aa12.21□□□□□ -0.45
COPB1-203ENST00000525214 TLL2Q9Y6L7 1015 aa12.21□□□□□ -0.45
COPB1-203ENST00000525214 HPS1Q92902 700 aa12.2□□□□□ -0.46
COPB1-203ENST00000525214 HMX1Q9NP08 348 aaPredicted RBP12.2□□□□□ -0.46
COPB1-203ENST00000525214 NR6A1Q15406 480 aa12.19□□□□□ -0.46
COPB1-203ENST00000525214 ARMC2Q8NEN0 867 aa12.19□□□□□ -0.46
COPB1-203ENST00000525214 SH3RF1Q7Z6J0 888 aa12.18□□□□□ -0.46
COPB1-203ENST00000525214 EPS8L1Q8TE68 723 aa12.18□□□□□ -0.46
COPB1-203ENST00000525214 SMCPP49901 116 aaPredicted RBP12.17□□□□□ -0.46
COPB1-203ENST00000525214 SH3BP5LQ7L8J4 393 aa12.17□□□□□ -0.46
COPB1-203ENST00000525214 CTC1Q2NKJ3 1217 aa12.16□□□□□ -0.46
COPB1-203ENST00000525214 NBPF14Q5TI25 921 aa12.16□□□□□ -0.46
COPB1-203ENST00000525214 MPNDQ8N594 471 aa12.16□□□□□ -0.46
COPB1-203ENST00000525214 DACH1Q9UI36 760 aa12.16□□□□□ -0.46
COPB1-203ENST00000525214 BPHLQ86WA6 291 aaPredicted RBP12.15□□□□□ -0.46
COPB1-203ENST00000525214 AXIN1O15169 862 aa12.14□□□□□ -0.47
COPB1-203ENST00000525214 AGERQ15109 404 aa12.14□□□□□ -0.47
COPB1-203ENST00000525214 FAM174AQ8TBP5 190 aa12.14□□□□□ -0.47
COPB1-203ENST00000525214 C1QTNF2Q9BXJ5 285 aa12.14□□□□□ -0.47
COPB1-203ENST00000525214 FKBPLQ9UIM3 349 aa12.14□□□□□ -0.47
COPB1-203ENST00000525214 TMEM259Q4ZIN3 620 aa12.13□□□□□ -0.47
COPB1-203ENST00000525214 GPKOWQ92917 476 aaPredicted RBP eCLIP12.13□□□□□ -0.47
COPB1-203ENST00000525214 POTECB2RU33 542 aa12.12□□□□□ -0.47
COPB1-203ENST00000525214 TRIM34Q9BYJ4 488 aa12.12□□□□□ -0.47
COPB1-203ENST00000525214 WASF2Q9Y6W5 498 aa12.12□□□□□ -0.47
COPB1-203ENST00000525214 CDK15Q96Q40 435 aa12.11□□□□□ -0.47
COPB1-203ENST00000525214 PDXDC2PQ6P474 469 aa12.1□□□□□ -0.47
COPB1-203ENST00000525214 MAGEB6P1A0A0J9YX57 407 aa12.09□□□□□ -0.47
COPB1-203ENST00000525214 ZNF787Q6DD87 383 aa12.09□□□□□ -0.47
COPB1-203ENST00000525214 OCSTAMPQ9BR26 566 aa12.09□□□□□ -0.47
COPB1-203ENST00000525214 ZC3H4Q9UPT8 1303 aaKnown RBP12.09□□□□□ -0.47
COPB1-203ENST00000525214 ADH1CP00326 375 aa12.08□□□□□ -0.48
COPB1-203ENST00000525214 GJD4Q96KN9 370 aaPredicted RBP12.08□□□□□ -0.48
COPB1-203ENST00000525214 CARD14Q9BXL6 1004 aa12.08□□□□□ -0.48
COPB1-203ENST00000525214 NNTQ13423 1086 aa12.07□□□□□ -0.48
COPB1-203ENST00000525214 ARID5BQ14865 1188 aa12.07□□□□□ -0.48
COPB1-203ENST00000525214 TRMT44Q8IYL2 757 aaKnown RBP12.07□□□□□ -0.48
COPB1-203ENST00000525214 GRM5P41594 1212 aa12.06□□□□□ -0.48
COPB1-203ENST00000525214 ERFEQ4G0M1 354 aa12.06□□□□□ -0.48
COPB1-203ENST00000525214 ARHGAP9Q9BRR9 750 aa12.05□□□□□ -0.48
COPB1-203ENST00000525214 NR3C2P08235 984 aa12.04□□□□□ -0.48
COPB1-203ENST00000525214 KLF16Q9BXK1 252 aaPredicted RBP12.04□□□□□ -0.48
COPB1-203ENST00000525214 ATP13A2Q9NQ11 1180 aa12.04□□□□□ -0.48
COPB1-203ENST00000525214 GMPR2Q9P2T1 348 aaKnown RBP12.04□□□□□ -0.48
COPB1-203ENST00000525214 BANK1Q8NDB2 785 aa12.03□□□□□ -0.48
COPB1-203ENST00000525214 MAP4K5Q9Y4K4 846 aa12.03□□□□□ -0.48
COPB1-203ENST00000525214 MTMR14Q8NCE2 650 aa12.02□□□□□ -0.49
COPB1-203ENST00000525214 GPSM3Q9Y4H4 160 aa12.02□□□□□ -0.49
COPB1-203ENST00000525214 CAPN5O15484 640 aaPredicted RBP12.01□□□□□ -0.49
COPB1-203ENST00000525214 SNRKQ9NRH2 765 aa12.01□□□□□ -0.49
COPB1-203ENST00000525214 TIMP2P16035 220 aa12□□□□□ -0.49
COPB1-203ENST00000525214 PTK2Q05397 1052 aa12□□□□□ -0.49
COPB1-203ENST00000525214 NR5A1Q13285 461 aa12□□□□□ -0.49
COPB1-203ENST00000525214 GPR37L1O60883 481 aa11.99□□□□□ -0.49
COPB1-203ENST00000525214 FSHRP23945 695 aa11.99□□□□□ -0.49
COPB1-203ENST00000525214 VASH1Q7L8A9 365 aaPredicted RBP11.99□□□□□ -0.49
COPB1-203ENST00000525214 ZBTB33Q86T24 672 aa11.99□□□□□ -0.49
COPB1-203ENST00000525214 PNMA1Q8ND90 353 aa11.99□□□□□ -0.49
COPB1-203ENST00000525214 ADAM32Q8TC27 787 aa11.99□□□□□ -0.49
COPB1-203ENST00000525214 SOCS7O14512 581 aa11.98□□□□□ -0.49
COPB1-203ENST00000525214 BMP1P13497 986 aa11.98□□□□□ -0.49
COPB1-203ENST00000525214 WDR4P57081 412 aaKnown RBP11.98□□□□□ -0.49
COPB1-203ENST00000525214 TRIM46Q7Z4K8 759 aa11.98□□□□□ -0.49
COPB1-203ENST00000525214 ITPKCQ96DU7 683 aa11.96□□□□□ -0.49
COPB1-203ENST00000525214 SLC10A4Q96EP9 437 aa11.96□□□□□ -0.49
COPB1-203ENST00000525214 ZFAND3Q9H8U3 227 aa11.96□□□□□ -0.49
COPB1-203ENST00000525214 ZIC2O95409 532 aaPredicted RBP11.94□□□□□ -0.5
COPB1-203ENST00000525214 C11orf95C9JLR9 678 aaPredicted RBP11.93□□□□□ -0.5
COPB1-203ENST00000525214 TRIM47Q96LD4 638 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms