RNA–Protein interactions for RNA: ENST00000525074.5

TRIM3-203, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM3, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-203ENST00000525074 SHROOM2Q13796 1616 aa16.39■□□□□ 0.21
TRIM3-203ENST00000525074 ABCA6Q8N139 1617 aa16.39■□□□□ 0.21
TRIM3-203ENST00000525074 FAM13BQ9NYF5 915 aa16.39■□□□□ 0.21
TRIM3-203ENST00000525074 RBM25P49756 843 aaKnown RBP16.38■□□□□ 0.21
TRIM3-203ENST00000525074 CHD1LQ86WJ1 897 aa16.38■□□□□ 0.21
TRIM3-203ENST00000525074 CHAMP1Q96JM3 812 aa16.38■□□□□ 0.21
TRIM3-203ENST00000525074 THUMPD2Q9BTF0 503 aaKnown RBP16.38■□□□□ 0.21
TRIM3-203ENST00000525074 NPM1P06748 294 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRIM3-203ENST00000525074 CEP152O94986 1710 aa16.38■□□□□ 0.21
TRIM3-203ENST00000525074 MSNP26038 577 aaKnown RBP16.37■□□□□ 0.21
TRIM3-203ENST00000525074 C14orf93Q9H972 538 aaKnown RBP16.37■□□□□ 0.21
TRIM3-203ENST00000525074 R3HCC1Q9Y3T6 440 aaKnown RBP16.37■□□□□ 0.21
TRIM3-203ENST00000525074 ASXL2Q76L83 1435 aa16.37■□□□□ 0.21
TRIM3-203ENST00000525074 MCTP1Q6DN14 999 aa16.37■□□□□ 0.21
TRIM3-203ENST00000525074 CAVIN1Q6NZI2 390 aaKnown RBP16.37■□□□□ 0.21
TRIM3-203ENST00000525074 ANP32BQ92688 251 aaKnown RBP16.37■□□□□ 0.21
TRIM3-203ENST00000525074 ZBTB40Q9NUA8 1239 aa16.37■□□□□ 0.21
TRIM3-203ENST00000525074 NUCB1Q02818 461 aa16.37■□□□□ 0.21
TRIM3-203ENST00000525074 IQSEC2Q5JU85 1478 aa16.36■□□□□ 0.21
TRIM3-203ENST00000525074 K7ELQ4 463 aaPredicted RBP16.36■□□□□ 0.21
TRIM3-203ENST00000525074 FOXD4L5Q5VV16 416 aaPredicted RBP16.36■□□□□ 0.21
TRIM3-203ENST00000525074 FOXD4L4Q8WXT5 416 aaPredicted RBP16.36■□□□□ 0.21
TRIM3-203ENST00000525074 SNX21Q969T3 373 aa16.36■□□□□ 0.21
TRIM3-203ENST00000525074 ZMYM3Q14202 1370 aa16.36■□□□□ 0.21
TRIM3-203ENST00000525074 PKP1Q13835 747 aa16.35■□□□□ 0.21
TRIM3-203ENST00000525074 IDI1Q13907 227 aa16.35■□□□□ 0.21
TRIM3-203ENST00000525074 TBC1D9Q6ZT07 1266 aa16.35■□□□□ 0.21
TRIM3-203ENST00000525074 TMPOP42166 694 aaKnown RBP16.35■□□□□ 0.21
TRIM3-203ENST00000525074 XPCQ01831 940 aaPredicted RBP16.35■□□□□ 0.21
TRIM3-203ENST00000525074 FBXO31Q5XUX0 539 aaPredicted RBP16.35■□□□□ 0.21
TRIM3-203ENST00000525074 ZSCAN30Q86W11 494 aa16.35■□□□□ 0.21
TRIM3-203ENST00000525074 TRIM35Q9UPQ4 493 aa16.35■□□□□ 0.21
TRIM3-203ENST00000525074 NPATQ14207 1427 aa16.34■□□□□ 0.21
TRIM3-203ENST00000525074 GOLGA6L22H0YM25 854 aa16.34■□□□□ 0.21
TRIM3-203ENST00000525074 TPM2P07951 284 aa16.34■□□□□ 0.21
TRIM3-203ENST00000525074 RIPK4P57078 832 aa16.34■□□□□ 0.21
TRIM3-203ENST00000525074 CCDC173Q0VFZ6 552 aa16.34■□□□□ 0.21
TRIM3-203ENST00000525074 CCDC27Q2M243 656 aa16.34■□□□□ 0.21
TRIM3-203ENST00000525074 SKOR2Q2VWA4 1001 aaPredicted RBP16.34■□□□□ 0.21
TRIM3-203ENST00000525074 NCOA3Q9Y6Q9 1424 aa16.34■□□□□ 0.21
TRIM3-203ENST00000525074 ISY1Q9ULR0 285 aaKnown RBP16.34■□□□□ 0.21
TRIM3-203ENST00000525074 MROH2AA6NES4 1674 aa16.33■□□□□ 0.21
TRIM3-203ENST00000525074 BAG4O95429 457 aaKnown RBP16.33■□□□□ 0.21
TRIM3-203ENST00000525074 HMOX1P09601 288 aa16.33■□□□□ 0.21
TRIM3-203ENST00000525074 SHPRHQ149N8 1683 aa16.33■□□□□ 0.2
TRIM3-203ENST00000525074 PRAM1Q96QH2 718 aa16.33■□□□□ 0.2
TRIM3-203ENST00000525074 RBM27Q9P2N5 1060 aaKnown RBP16.32■□□□□ 0.2
TRIM3-203ENST00000525074 MAP3K4Q9Y6R4 1608 aa16.32■□□□□ 0.2
TRIM3-203ENST00000525074 MLECQ14165 292 aa16.32■□□□□ 0.2
TRIM3-203ENST00000525074 CIZ1Q9ULV3 898 aaPredicted RBP16.32■□□□□ 0.2
TRIM3-203ENST00000525074 APBB1O00213 710 aa16.32■□□□□ 0.2
TRIM3-203ENST00000525074 PDCL3Q9H2J4 239 aa16.32■□□□□ 0.2
TRIM3-203ENST00000525074 AK9Q5TCS8 1911 aa16.31■□□□□ 0.2
TRIM3-203ENST00000525074 TET3O43151 1660 aa16.31■□□□□ 0.2
TRIM3-203ENST00000525074 EVC2Q86UK5 1308 aa16.31■□□□□ 0.2
TRIM3-203ENST00000525074 ZNF518AQ6AHZ1 1483 aa16.31■□□□□ 0.2
TRIM3-203ENST00000525074 MPNDQ8N594 471 aa16.3■□□□□ 0.2
TRIM3-203ENST00000525074 STAC3Q96MF2 364 aa16.3■□□□□ 0.2
TRIM3-203ENST00000525074 CD109Q6YHK3 1445 aa16.3■□□□□ 0.2
TRIM3-203ENST00000525074 BMP2KLQ5H9B9 411 aa16.29■□□□□ 0.2
TRIM3-203ENST00000525074 WAPLQ7Z5K2 1190 aa16.29■□□□□ 0.2
TRIM3-203ENST00000525074 RBSNQ9H1K0 784 aa16.29■□□□□ 0.2
TRIM3-203ENST00000525074 PPRC1Q5VV67 1664 aaKnown RBP16.29■□□□□ 0.2
TRIM3-203ENST00000525074 TPRNQ4KMQ1 711 aa16.29■□□□□ 0.2
TRIM3-203ENST00000525074 CABP1Q9NZU7 370 aa16.29■□□□□ 0.2
TRIM3-203ENST00000525074 OFD1O75665 1012 aa16.29■□□□□ 0.2
TRIM3-203ENST00000525074 CALD1Q05682 793 aaKnown RBP16.29■□□□□ 0.2
TRIM3-203ENST00000525074 ZRANB1Q9UGI0 708 aa16.29■□□□□ 0.2
TRIM3-203ENST00000525074 STAG3Q9UJ98 1225 aa16.29■□□□□ 0.2
TRIM3-203ENST00000525074 NCKAP5LQ9HCH0 1330 aa16.28■□□□□ 0.2
TRIM3-203ENST00000525074 MROH1Q8NDA8 1641 aa16.28■□□□□ 0.2
TRIM3-203ENST00000525074 ATAD2Q6PL18 1390 aa16.28■□□□□ 0.2
TRIM3-203ENST00000525074 RNF214Q8ND24 703 aa16.28■□□□□ 0.2
TRIM3-203ENST00000525074 PPP1R9BQ96SB3 815 aa16.28■□□□□ 0.2
TRIM3-203ENST00000525074 NUTM2FA1L443 756 aa16.28■□□□□ 0.2
TRIM3-203ENST00000525074 IPO8O15397 1037 aaKnown RBP16.28■□□□□ 0.2
TRIM3-203ENST00000525074 PRPF40AO75400 957 aaKnown RBP16.28■□□□□ 0.2
TRIM3-203ENST00000525074 PRIM1P49642 420 aaKnown RBP16.28■□□□□ 0.2
TRIM3-203ENST00000525074 KLHL40Q2TBA0 621 aa16.28■□□□□ 0.2
TRIM3-203ENST00000525074 FYB1O15117 783 aa16.27■□□□□ 0.2
TRIM3-203ENST00000525074 SLC24A1O60721 1099 aa16.27■□□□□ 0.2
TRIM3-203ENST00000525074 ZSCAN23Q3MJ62 389 aa16.27■□□□□ 0.2
TRIM3-203ENST00000525074 A0A1W2PP64 1363 aa16.27■□□□□ 0.2
TRIM3-203ENST00000525074 SOX12O15370 315 aa16.27■□□□□ 0.19
TRIM3-203ENST00000525074 ZGPATQ8N5A5 531 aaKnown RBP16.27■□□□□ 0.19
TRIM3-203ENST00000525074 PLEKHF1Q96S99 279 aa16.27■□□□□ 0.19
TRIM3-203ENST00000525074 FOXD4L6Q3SYB3 417 aaPredicted RBP16.26■□□□□ 0.19
TRIM3-203ENST00000525074 FOXD4L3Q6VB84 417 aaPredicted RBP16.26■□□□□ 0.19
TRIM3-203ENST00000525074 C16orf71Q8IYS4 520 aaPredicted RBP16.26■□□□□ 0.19
TRIM3-203ENST00000525074 UHRF1BP1LA0JNW5 1464 aa16.25■□□□□ 0.19
TRIM3-203ENST00000525074 VGFO15240 615 aaPredicted RBP16.25■□□□□ 0.19
TRIM3-203ENST00000525074 TSPYL6Q8N831 410 aa16.25■□□□□ 0.19
TRIM3-203ENST00000525074 KIF16BQ96L93 1317 aa16.25■□□□□ 0.19
TRIM3-203ENST00000525074 EFCAB6Q5THR3 1501 aa16.25■□□□□ 0.19
TRIM3-203ENST00000525074 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.25■□□□□ 0.19
TRIM3-203ENST00000525074 SIRT2Q8IXJ6 389 aa16.25■□□□□ 0.19
TRIM3-203ENST00000525074 INO80Q9ULG1 1556 aaPredicted RBP16.24■□□□□ 0.19
TRIM3-203ENST00000525074 UQCRHLA0A096LP55 91 aa16.24■□□□□ 0.19
TRIM3-203ENST00000525074 UQCRHP07919 91 aa16.24■□□□□ 0.19
TRIM3-203ENST00000525074 PRDM10Q9NQV6 1147 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms