RNA–Protein interactions for RNA: ENST00000525051.5

SCRIB-204, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 1 (best)

Gene SCRIB, Length 1,685 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-204ENST00000525051 SMG6Q86US8 1419 aaKnown RBP25.4■■□□□ 1.66
SCRIB-204ENST00000525051 NSD3Q9BZ95 1437 aa25.4■■□□□ 1.66
SCRIB-204ENST00000525051 NINLQ9Y2I6 1382 aa25.4■■□□□ 1.66
SCRIB-204ENST00000525051 COL16A1Q07092 1604 aaPredicted RBP25.39■■□□□ 1.66
SCRIB-204ENST00000525051 FOXO3O43524 673 aa25.39■■□□□ 1.66
SCRIB-204ENST00000525051 PMFBP1Q8TBY8 1022 aa25.39■■□□□ 1.65
SCRIB-204ENST00000525051 PHF8Q9UPP1 1060 aa25.39■■□□□ 1.65
SCRIB-204ENST00000525051 ITSN1Q15811 1721 aa25.39■■□□□ 1.65
SCRIB-204ENST00000525051 KIF1AQ12756 1690 aa25.38■■□□□ 1.65
SCRIB-204ENST00000525051 TOPAZ1Q8N9V7 1692 aa25.38■■□□□ 1.65
SCRIB-204ENST00000525051 ANKRD36BQ8N2N9 1353 aa25.38■■□□□ 1.65
SCRIB-204ENST00000525051 XPCQ01831 940 aaPredicted RBP25.36■■□□□ 1.65
SCRIB-204ENST00000525051 ERICH6BQ5W0A0 696 aa25.34■■□□□ 1.65
SCRIB-204ENST00000525051 CCDC61Q9Y6R9 512 aa25.34■■□□□ 1.65
SCRIB-204ENST00000525051 ATAD2Q6PL18 1390 aa25.33■■□□□ 1.65
SCRIB-204ENST00000525051 PXDNQ92626 1479 aa25.32■■□□□ 1.64
SCRIB-204ENST00000525051 SOS2Q07890 1332 aaPredicted RBP25.31■■□□□ 1.64
SCRIB-204ENST00000525051 NPHP3Q7Z494 1330 aa25.31■■□□□ 1.64
SCRIB-204ENST00000525051 CD163L1Q9NR16 1453 aa25.31■■□□□ 1.64
SCRIB-204ENST00000525051 PPIP5K1Q6PFW1 1433 aa25.31■■□□□ 1.64
SCRIB-204ENST00000525051 NUDCQ9Y266 331 aa25.29■■□□□ 1.64
SCRIB-204ENST00000525051 CABP1Q9NZU7 370 aa25.29■■□□□ 1.64
SCRIB-204ENST00000525051 NSD2O96028 1365 aa25.28■■□□□ 1.64
SCRIB-204ENST00000525051 PLEKHG3A1L390 1219 aa25.27■■□□□ 1.64
SCRIB-204ENST00000525051 KRT28Q7Z3Y7 464 aa25.27■■□□□ 1.64
SCRIB-204ENST00000525051 NGDNQ8NEJ9 315 aaKnown RBP25.27■■□□□ 1.64
SCRIB-204ENST00000525051 A0A1W2PP64 1363 aa25.27■■□□□ 1.64
SCRIB-204ENST00000525051 PSME1Q06323 249 aa25.26■■□□□ 1.63
SCRIB-204ENST00000525051 ADAMTS8Q9UP79 889 aa25.26■■□□□ 1.63
SCRIB-204ENST00000525051 ACEP12821 1306 aa25.26■■□□□ 1.63
SCRIB-204ENST00000525051 CGNL1Q0VF96 1302 aa25.26■■□□□ 1.63
SCRIB-204ENST00000525051 POLR3AO14802 1390 aaPredicted RBP25.25■■□□□ 1.63
SCRIB-204ENST00000525051 LRRC59Q96AG4 307 aaKnown RBP25.24■■□□□ 1.63
SCRIB-204ENST00000525051 TRPM3Q9HCF6 1732 aaPredicted RBP25.23■■□□□ 1.63
SCRIB-204ENST00000525051 SHPRHQ149N8 1683 aa25.22■■□□□ 1.63
SCRIB-204ENST00000525051 JCADQ9P266 1359 aa25.22■■□□□ 1.63
SCRIB-204ENST00000525051 RNF123Q5XPI4 1314 aa25.22■■□□□ 1.63
SCRIB-204ENST00000525051 PDE3BQ13370 1112 aa25.21■■□□□ 1.63
SCRIB-204ENST00000525051 SENP3-EIF4A1A0A087X0R7 540 aa25.2■■□□□ 1.63
SCRIB-204ENST00000525051 MORC1Q86VD1 984 aa25.2■■□□□ 1.63
SCRIB-204ENST00000525051 AKAP12Q02952 1782 aa25.2■■□□□ 1.62
SCRIB-204ENST00000525051 WDR43Q15061 677 aaKnown RBP eCLIP25.19■■□□□ 1.62
SCRIB-204ENST00000525051 PNPLA6Q8IY17 1366 aa25.18■■□□□ 1.62
SCRIB-204ENST00000525051 ANKRD26Q9UPS8 1709 aa25.18■■□□□ 1.62
SCRIB-204ENST00000525051 SPATA31A3Q5VYP0 1347 aa25.18■■□□□ 1.62
SCRIB-204ENST00000525051 TERF2IPQ9NYB0 399 aa25.17■■□□□ 1.62
SCRIB-204ENST00000525051 SBNO1A3KN83 1393 aa25.16■■□□□ 1.62
SCRIB-204ENST00000525051 ALS2Q96Q42 1657 aa25.16■■□□□ 1.62
SCRIB-204ENST00000525051 TNS3Q68CZ2 1445 aa25.15■■□□□ 1.62
SCRIB-204ENST00000525051 PAK3O75914 559 aaPredicted RBP25.15■■□□□ 1.62
SCRIB-204ENST00000525051 CPSF1Q10570 1443 aaKnown RBP25.15■■□□□ 1.62
SCRIB-204ENST00000525051 TSHZ2Q9NRE2 1034 aa25.14■■□□□ 1.62
SCRIB-204ENST00000525051 LMOD2Q6P5Q4 547 aa25.13■■□□□ 1.61
SCRIB-204ENST00000525051 COL22A1Q8NFW1 1626 aaPredicted RBP25.13■■□□□ 1.61
SCRIB-204ENST00000525051 USP6P35125 1406 aa25.13■■□□□ 1.61
SCRIB-204ENST00000525051 ZNF521Q96K83 1311 aa25.12■■□□□ 1.61
SCRIB-204ENST00000525051 MON2Q7Z3U7 1717 aa25.12■■□□□ 1.61
SCRIB-204ENST00000525051 LRP6O75581 1613 aa25.11■■□□□ 1.61
SCRIB-204ENST00000525051 NUTM2BA6NNL0 878 aaPredicted RBP25.1■■□□□ 1.61
SCRIB-204ENST00000525051 NUTM2EB1AL46 878 aaPredicted RBP25.1■■□□□ 1.61
SCRIB-204ENST00000525051 FYB1O15117 783 aa25.1■■□□□ 1.61
SCRIB-204ENST00000525051 PLEKHG5O94827 1062 aa25.1■■□□□ 1.61
SCRIB-204ENST00000525051 NUTM2AQ8IVF1 878 aaPredicted RBP25.1■■□□□ 1.61
SCRIB-204ENST00000525051 SSH2Q76I76 1423 aa25.1■■□□□ 1.61
SCRIB-204ENST00000525051 HDGFL2Q7Z4V5 671 aaPredicted RBP25.1■■□□□ 1.61
SCRIB-204ENST00000525051 KIF20BQ96Q89 1820 aa25.1■■□□□ 1.61
SCRIB-204ENST00000525051 SPATA31A6Q5VVP1 1343 aa25.09■■□□□ 1.61
SCRIB-204ENST00000525051 NRKQ7Z2Y5 1582 aa25.09■■□□□ 1.61
SCRIB-204ENST00000525051 ZNF692Q9BU19 519 aaPredicted RBP25.09■■□□□ 1.61
SCRIB-204ENST00000525051 MED1Q15648 1581 aaPredicted RBP25.09■■□□□ 1.61
SCRIB-204ENST00000525051 CABLES1Q8TDN4 633 aa25.08■■□□□ 1.61
SCRIB-204ENST00000525051 NUTM2GQ5VZR2 741 aa25.07■■□□□ 1.6
SCRIB-204ENST00000525051 SALL2Q9Y467 1007 aaPredicted RBP25.07■■□□□ 1.6
SCRIB-204ENST00000525051 MTHFSP49914 203 aa25.07■■□□□ 1.6
SCRIB-204ENST00000525051 IRX6P78412 446 aaPredicted RBP25.07■■□□□ 1.6
SCRIB-204ENST00000525051 CDCA7LQ96GN5 454 aa25.07■■□□□ 1.6
SCRIB-204ENST00000525051 ARHGEF10O15013 1369 aa25.06■■□□□ 1.6
SCRIB-204ENST00000525051 ABCA3Q99758 1704 aa25.05■■□□□ 1.6
SCRIB-204ENST00000525051 TNNT2P45379 298 aaPredicted RBP25.05■■□□□ 1.6
SCRIB-204ENST00000525051 ABTB2Q8N961 1025 aa25.04■■□□□ 1.6
SCRIB-204ENST00000525051 GGNBP2Q9H3C7 697 aa25.04■■□□□ 1.6
SCRIB-204ENST00000525051 TTC21BQ7Z4L5 1316 aa25.04■■□□□ 1.6
SCRIB-204ENST00000525051 PIK3C2AO00443 1686 aa25.04■■□□□ 1.6
SCRIB-204ENST00000525051 CRYBG1Q9Y4K1 1723 aa25.04■■□□□ 1.6
SCRIB-204ENST00000525051 COL3A1P02461 1466 aaPredicted RBP25.04■■□□□ 1.6
SCRIB-204ENST00000525051 PPP4R2Q9NY27 417 aa25.04■■□□□ 1.6
SCRIB-204ENST00000525051 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.02■■□□□ 1.6
SCRIB-204ENST00000525051 EDC4Q6P2E9 1401 aaKnown RBP25.02■■□□□ 1.6
SCRIB-204ENST00000525051 ADAMTS2O95450 1211 aa25.01■■□□□ 1.59
SCRIB-204ENST00000525051 NGEFQ8N5V2 710 aa25.01■■□□□ 1.59
SCRIB-204ENST00000525051 CCDC146Q8IYE0 955 aa25■■□□□ 1.59
SCRIB-204ENST00000525051 MARF1Q9Y4F3 1742 aaKnown RBP25■■□□□ 1.59
SCRIB-204ENST00000525051 CFAP53Q96M91 514 aa24.99■■□□□ 1.59
SCRIB-204ENST00000525051 ZRANB1Q9UGI0 708 aa24.98■■□□□ 1.59
SCRIB-204ENST00000525051 PHRF1Q9P1Y6 1649 aaKnown RBP24.98■■□□□ 1.59
SCRIB-204ENST00000525051 APAF1O14727 1248 aa24.97■■□□□ 1.59
SCRIB-204ENST00000525051 NLRP6P59044 892 aa24.97■■□□□ 1.59
SCRIB-204ENST00000525051 NME9Q86XW9 330 aa24.97■■□□□ 1.59
SCRIB-204ENST00000525051 RCAN3Q9UKA8 241 aa24.97■■□□□ 1.59
SCRIB-204ENST00000525051 TTC21AQ8NDW8 1320 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms