RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 EDC4Q6P2E9 1401 aaKnown RBP19.36■□□□□ 0.69
UBXN1-205ENST00000525004 COL16A1Q07092 1604 aaPredicted RBP19.36■□□□□ 0.69
UBXN1-205ENST00000525004 ALS2Q96Q42 1657 aa19.35■□□□□ 0.69
UBXN1-205ENST00000525004 TTC21BQ7Z4L5 1316 aa19.34■□□□□ 0.69
UBXN1-205ENST00000525004 SPATA31A3Q5VYP0 1347 aa19.33■□□□□ 0.69
UBXN1-205ENST00000525004 TTC21AQ8NDW8 1320 aa19.33■□□□□ 0.69
UBXN1-205ENST00000525004 SCAF1Q9H7N4 1312 aaKnown RBP19.33■□□□□ 0.69
UBXN1-205ENST00000525004 XPCQ01831 940 aaPredicted RBP19.32■□□□□ 0.68
UBXN1-205ENST00000525004 LRRC59Q96AG4 307 aaKnown RBP19.32■□□□□ 0.68
UBXN1-205ENST00000525004 DDX10Q13206 875 aaKnown RBP19.31■□□□□ 0.68
UBXN1-205ENST00000525004 USP54Q70EL1 1684 aa19.3■□□□□ 0.68
UBXN1-205ENST00000525004 TNS3Q68CZ2 1445 aa19.3■□□□□ 0.68
UBXN1-205ENST00000525004 NSD3Q9BZ95 1437 aa19.3■□□□□ 0.68
UBXN1-205ENST00000525004 PIK3C2AO00443 1686 aa19.29■□□□□ 0.68
UBXN1-205ENST00000525004 USP31Q70CQ4 1352 aa19.29■□□□□ 0.68
UBXN1-205ENST00000525004 NPC1L1Q9UHC9 1359 aa19.29■□□□□ 0.68
UBXN1-205ENST00000525004 MARF1Q9Y4F3 1742 aaKnown RBP19.28■□□□□ 0.68
UBXN1-205ENST00000525004 KIF20BQ96Q89 1820 aa19.28■□□□□ 0.68
UBXN1-205ENST00000525004 FYB1O15117 783 aa19.28■□□□□ 0.68
UBXN1-205ENST00000525004 HSPA1LP34931 641 aa19.28■□□□□ 0.68
UBXN1-205ENST00000525004 AMER1Q5JTC6 1135 aaPredicted RBP19.28■□□□□ 0.68
UBXN1-205ENST00000525004 KNSTRNQ9Y448 316 aa19.27■□□□□ 0.68
UBXN1-205ENST00000525004 ARHGEF10O15013 1369 aa19.27■□□□□ 0.68
UBXN1-205ENST00000525004 CGNL1Q0VF96 1302 aa19.26■□□□□ 0.67
UBXN1-205ENST00000525004 COL22A1Q8NFW1 1626 aaPredicted RBP19.26■□□□□ 0.67
UBXN1-205ENST00000525004 ABTB2Q8N961 1025 aa19.26■□□□□ 0.67
UBXN1-205ENST00000525004 SHPRHQ149N8 1683 aa19.26■□□□□ 0.67
UBXN1-205ENST00000525004 PAK3O75914 559 aaPredicted RBP19.25■□□□□ 0.67
UBXN1-205ENST00000525004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.25■□□□□ 0.67
UBXN1-205ENST00000525004 ANKRD26Q9UPS8 1709 aa19.25■□□□□ 0.67
UBXN1-205ENST00000525004 CRYBG1Q9Y4K1 1723 aa19.25■□□□□ 0.67
UBXN1-205ENST00000525004 MED1Q15648 1581 aaPredicted RBP19.24■□□□□ 0.67
UBXN1-205ENST00000525004 NSD2O96028 1365 aa19.24■□□□□ 0.67
UBXN1-205ENST00000525004 PNPLA6Q8IY17 1366 aa19.24■□□□□ 0.67
UBXN1-205ENST00000525004 NME9Q86XW9 330 aa19.24■□□□□ 0.67
UBXN1-205ENST00000525004 NLRP13Q86W25 1043 aa19.23■□□□□ 0.67
UBXN1-205ENST00000525004 OVOS2A0A0J9YW53 1432 aa19.23■□□□□ 0.67
UBXN1-205ENST00000525004 OVOS2Q6IE36 1432 aa19.23■□□□□ 0.67
UBXN1-205ENST00000525004 USP19O94966 1318 aa19.23■□□□□ 0.67
UBXN1-205ENST00000525004 JCADQ9P266 1359 aa19.22■□□□□ 0.67
UBXN1-205ENST00000525004 NLRP6P59044 892 aa19.21■□□□□ 0.67
UBXN1-205ENST00000525004 ZRANB1Q9UGI0 708 aa19.2■□□□□ 0.66
UBXN1-205ENST00000525004 SLIT3O75094 1523 aa19.2■□□□□ 0.66
UBXN1-205ENST00000525004 GGNBP2Q9H3C7 697 aa19.19■□□□□ 0.66
UBXN1-205ENST00000525004 ABCA3Q99758 1704 aa19.19■□□□□ 0.66
UBXN1-205ENST00000525004 LMOD2Q6P5Q4 547 aa19.18■□□□□ 0.66
UBXN1-205ENST00000525004 COG3Q96JB2 828 aa19.18■□□□□ 0.66
UBXN1-205ENST00000525004 PHRF1Q9P1Y6 1649 aaKnown RBP19.18■□□□□ 0.66
UBXN1-205ENST00000525004 NUTM2GQ5VZR2 741 aa19.17■□□□□ 0.66
UBXN1-205ENST00000525004 SPATA31A6Q5VVP1 1343 aa19.16■□□□□ 0.66
UBXN1-205ENST00000525004 GCP02774 474 aa19.15■□□□□ 0.66
UBXN1-205ENST00000525004 KCNH5Q8NCM2 988 aa19.15■□□□□ 0.66
UBXN1-205ENST00000525004 MAP2P11137 1827 aaKnown RBP19.15■□□□□ 0.66
UBXN1-205ENST00000525004 AATKQ6ZMQ8 1374 aa19.14■□□□□ 0.65
UBXN1-205ENST00000525004 NFAT5O94916 1531 aa19.14■□□□□ 0.65
UBXN1-205ENST00000525004 CC2D1BQ5T0F9 858 aaKnown RBP19.13■□□□□ 0.65
UBXN1-205ENST00000525004 CABLES1Q8TDN4 633 aa19.13■□□□□ 0.65
UBXN1-205ENST00000525004 PARD3Q8TEW0 1356 aa19.12■□□□□ 0.65
UBXN1-205ENST00000525004 CPDO75976 1380 aa19.11■□□□□ 0.65
UBXN1-205ENST00000525004 MORC1Q86VD1 984 aa19.11■□□□□ 0.65
UBXN1-205ENST00000525004 ILDR1Q86SU0 546 aaPredicted RBP19.1■□□□□ 0.65
UBXN1-205ENST00000525004 ARHGEF25Q86VW2 580 aa19.1■□□□□ 0.65
UBXN1-205ENST00000525004 LTN1O94822 1766 aa19.09■□□□□ 0.65
UBXN1-205ENST00000525004 RALBP1Q15311 655 aa19.09■□□□□ 0.65
UBXN1-205ENST00000525004 COL18A1P39060 1754 aa19.09■□□□□ 0.65
UBXN1-205ENST00000525004 PRKRIP1Q9H875 184 aaPredicted RBP19.08■□□□□ 0.64
UBXN1-205ENST00000525004 FBLN1P23142 703 aa19.07■□□□□ 0.64
UBXN1-205ENST00000525004 LRP6O75581 1613 aa19.07■□□□□ 0.64
UBXN1-205ENST00000525004 KIF24Q5T7B8 1368 aa19.06■□□□□ 0.64
UBXN1-205ENST00000525004 POLKQ9UBT6 870 aa19.06■□□□□ 0.64
UBXN1-205ENST00000525004 ABCC6O95255 1503 aa19.05■□□□□ 0.64
UBXN1-205ENST00000525004 SMG6Q86US8 1419 aaKnown RBP19.05■□□□□ 0.64
UBXN1-205ENST00000525004 KIAA0232Q92628 1395 aa19.05■□□□□ 0.64
UBXN1-205ENST00000525004 ZC3H6P61129 1189 aaKnown RBP19.04■□□□□ 0.64
UBXN1-205ENST00000525004 LMO7Q8WWI1 1683 aa19.04■□□□□ 0.64
UBXN1-205ENST00000525004 COL14A1Q05707 1796 aaKnown RBP19.04■□□□□ 0.64
UBXN1-205ENST00000525004 MAP3K19Q56UN5 1328 aa19.03■□□□□ 0.64
UBXN1-205ENST00000525004 FAM83GA6ND36 823 aa19.03■□□□□ 0.64
UBXN1-205ENST00000525004 PPP2R1AP30153 589 aa19.03■□□□□ 0.64
UBXN1-205ENST00000525004 HAP1P54257 671 aaPredicted RBP19.03■□□□□ 0.64
UBXN1-205ENST00000525004 RGPD5Q99666 1765 aa19.03■□□□□ 0.64
UBXN1-205ENST00000525004 PEAK1Q9H792 1746 aa19.03■□□□□ 0.64
UBXN1-205ENST00000525004 NUTM2BA6NNL0 878 aaPredicted RBP19.02■□□□□ 0.64
UBXN1-205ENST00000525004 NUTM2EB1AL46 878 aaPredicted RBP19.02■□□□□ 0.64
UBXN1-205ENST00000525004 RRS1Q15050 365 aaKnown RBP19.02■□□□□ 0.64
UBXN1-205ENST00000525004 DIEXFQ68CQ4 756 aaKnown RBP19.02■□□□□ 0.64
UBXN1-205ENST00000525004 NUTM2AQ8IVF1 878 aaPredicted RBP19.02■□□□□ 0.64
UBXN1-205ENST00000525004 INSRP06213 1382 aa19.02■□□□□ 0.64
UBXN1-205ENST00000525004 SOX12O15370 315 aa19.01■□□□□ 0.63
UBXN1-205ENST00000525004 PLEKHG5O94827 1062 aa19.01■□□□□ 0.63
UBXN1-205ENST00000525004 TNNT2P45379 298 aaPredicted RBP19.01■□□□□ 0.63
UBXN1-205ENST00000525004 IP6K1Q92551 441 aa19.01■□□□□ 0.63
UBXN1-205ENST00000525004 RTL1A6NKG5 1358 aa19.01■□□□□ 0.63
UBXN1-205ENST00000525004 NWD2Q9ULI1 1742 aa19■□□□□ 0.63
UBXN1-205ENST00000525004 ANP32CO43423 234 aa19■□□□□ 0.63
UBXN1-205ENST00000525004 PRDM11Q9NQV5 511 aa19■□□□□ 0.63
UBXN1-205ENST00000525004 EMILIN1Q9Y6C2 1016 aa19■□□□□ 0.63
UBXN1-205ENST00000525004 SLIT2O94813 1529 aa19■□□□□ 0.63
UBXN1-205ENST00000525004 FLT4P35916 1363 aa18.99■□□□□ 0.63
UBXN1-205ENST00000525004 ADAMTS2O95450 1211 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms