RNA–Protein interactions for RNA: ENST00000524784.1

PACS1-202, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-202ENST00000524784 NME9Q86XW9 330 aa14.28□□□□□ -0.12
PACS1-202ENST00000524784 COG3Q96JB2 828 aa14.28□□□□□ -0.12
PACS1-202ENST00000524784 SLAIN2Q9P270 581 aa14.28□□□□□ -0.12
PACS1-202ENST00000524784 FOXO3O43524 673 aa14.27□□□□□ -0.13
PACS1-202ENST00000524784 PAK3O75914 559 aaPredicted RBP14.27□□□□□ -0.13
PACS1-202ENST00000524784 TNNT2P45379 298 aaPredicted RBP14.27□□□□□ -0.13
PACS1-202ENST00000524784 AKAP12Q02952 1782 aa14.27□□□□□ -0.13
PACS1-202ENST00000524784 MON2Q7Z3U7 1717 aa14.25□□□□□ -0.13
PACS1-202ENST00000524784 CCDC184Q52MB2 194 aa14.25□□□□□ -0.13
PACS1-202ENST00000524784 KRT28Q7Z3Y7 464 aa14.25□□□□□ -0.13
PACS1-202ENST00000524784 XIRP1Q702N8 1843 aaKnown RBP14.25□□□□□ -0.13
PACS1-202ENST00000524784 SSH2Q76I76 1423 aa14.24□□□□□ -0.13
PACS1-202ENST00000524784 LTBP4Q8N2S1 1624 aa14.24□□□□□ -0.13
PACS1-202ENST00000524784 ABTB2Q8N961 1025 aa14.24□□□□□ -0.13
PACS1-202ENST00000524784 NPHP3Q7Z494 1330 aa14.23□□□□□ -0.13
PACS1-202ENST00000524784 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
PACS1-202ENST00000524784 CFAP53Q96M91 514 aa14.23□□□□□ -0.13
PACS1-202ENST00000524784 ZRANB1Q9UGI0 708 aa14.23□□□□□ -0.13
PACS1-202ENST00000524784 KIF1AQ12756 1690 aa14.23□□□□□ -0.13
PACS1-202ENST00000524784 NLRP6P59044 892 aa14.22□□□□□ -0.13
PACS1-202ENST00000524784 XPCQ01831 940 aaPredicted RBP14.22□□□□□ -0.13
PACS1-202ENST00000524784 BRINP3Q76B58 766 aa14.22□□□□□ -0.13
PACS1-202ENST00000524784 KIF20BQ96Q89 1820 aa14.21□□□□□ -0.13
PACS1-202ENST00000524784 MTHFSP49914 203 aa14.21□□□□□ -0.13
PACS1-202ENST00000524784 FAM9BQ8IZU0 186 aa14.21□□□□□ -0.13
PACS1-202ENST00000524784 USP31Q70CQ4 1352 aa14.21□□□□□ -0.14
PACS1-202ENST00000524784 LMOD2Q6P5Q4 547 aa14.2□□□□□ -0.14
PACS1-202ENST00000524784 TOM1O60784 492 aa14.19□□□□□ -0.14
PACS1-202ENST00000524784 NUTM2GQ5VZR2 741 aa14.19□□□□□ -0.14
PACS1-202ENST00000524784 PNISRQ8TF01 805 aaKnown RBP14.19□□□□□ -0.14
PACS1-202ENST00000524784 YTHDC1Q96MU7 727 aaKnown RBP14.19□□□□□ -0.14
PACS1-202ENST00000524784 NRKQ7Z2Y5 1582 aa14.18□□□□□ -0.14
PACS1-202ENST00000524784 AATKQ6ZMQ8 1374 aa14.18□□□□□ -0.14
PACS1-202ENST00000524784 ANKRD26Q9UPS8 1709 aa14.18□□□□□ -0.14
PACS1-202ENST00000524784 PPM1GO15355 546 aaPredicted RBP14.17□□□□□ -0.14
PACS1-202ENST00000524784 WDR43Q15061 677 aaKnown RBP eCLIP14.17□□□□□ -0.14
PACS1-202ENST00000524784 DDX17Q92841 729 aaKnown RBP14.17□□□□□ -0.14
PACS1-202ENST00000524784 SBNO1A3KN83 1393 aa14.17□□□□□ -0.14
PACS1-202ENST00000524784 OVOS2A0A0J9YW53 1432 aa14.16□□□□□ -0.14
PACS1-202ENST00000524784 OVOS2Q6IE36 1432 aa14.16□□□□□ -0.14
PACS1-202ENST00000524784 SOX12O15370 315 aa14.16□□□□□ -0.14
PACS1-202ENST00000524784 KCNH5Q8NCM2 988 aa14.16□□□□□ -0.14
PACS1-202ENST00000524784 POLKQ9UBT6 870 aa14.16□□□□□ -0.14
PACS1-202ENST00000524784 FBLN1P23142 703 aa14.15□□□□□ -0.14
PACS1-202ENST00000524784 NUDCQ9Y266 331 aa14.15□□□□□ -0.14
PACS1-202ENST00000524784 SOS2Q07890 1332 aaPredicted RBP14.14□□□□□ -0.15
PACS1-202ENST00000524784 RRS1Q15050 365 aaKnown RBP14.13□□□□□ -0.15
PACS1-202ENST00000524784 CERKQ8TCT0 537 aa14.13□□□□□ -0.15
PACS1-202ENST00000524784 SPATA31A3Q5VYP0 1347 aa14.13□□□□□ -0.15
PACS1-202ENST00000524784 ARHGEF10O15013 1369 aa14.12□□□□□ -0.15
PACS1-202ENST00000524784 PIK3C2AO00443 1686 aa14.12□□□□□ -0.15
PACS1-202ENST00000524784 UBAP1LF5GYI3 381 aa14.12□□□□□ -0.15
PACS1-202ENST00000524784 DIAPH1O60610 1272 aaKnown RBP14.12□□□□□ -0.15
PACS1-202ENST00000524784 PLEKHG5O94827 1062 aa14.12□□□□□ -0.15
PACS1-202ENST00000524784 AMPHP49418 695 aa14.12□□□□□ -0.15
PACS1-202ENST00000524784 EMILIN1Q9Y6C2 1016 aa14.12□□□□□ -0.15
PACS1-202ENST00000524784 PXDNQ92626 1479 aa14.12□□□□□ -0.15
PACS1-202ENST00000524784 PIP4K2BP78356 416 aa14.11□□□□□ -0.15
PACS1-202ENST00000524784 TNS3Q68CZ2 1445 aa14.11□□□□□ -0.15
PACS1-202ENST00000524784 IQSEC2Q5JU85 1478 aa14.11□□□□□ -0.15
PACS1-202ENST00000524784 GCP02774 474 aa14.1□□□□□ -0.15
PACS1-202ENST00000524784 ADAMTS8Q9UP79 889 aa14.1□□□□□ -0.15
PACS1-202ENST00000524784 MAP3K19Q56UN5 1328 aa14.1□□□□□ -0.15
PACS1-202ENST00000524784 TRPM3Q9HCF6 1732 aaPredicted RBP14.1□□□□□ -0.15
PACS1-202ENST00000524784 INSRP06213 1382 aa14.09□□□□□ -0.15
PACS1-202ENST00000524784 PNPLA6Q8IY17 1366 aa14.09□□□□□ -0.15
PACS1-202ENST00000524784 HNRNPUQ00839 825 aaKnown RBP eCLIP14.09□□□□□ -0.15
PACS1-202ENST00000524784 LRRC59Q96AG4 307 aaKnown RBP14.09□□□□□ -0.15
PACS1-202ENST00000524784 USP19O94966 1318 aa14.09□□□□□ -0.15
PACS1-202ENST00000524784 SMG6Q86US8 1419 aaKnown RBP14.08□□□□□ -0.15
PACS1-202ENST00000524784 CDK12Q9NYV4 1490 aaPredicted RBP14.08□□□□□ -0.16
PACS1-202ENST00000524784 U2SURPO15042 1029 aaKnown RBP14.08□□□□□ -0.16
PACS1-202ENST00000524784 U2AF1L5P0DN76 240 aaPredicted RBP14.08□□□□□ -0.16
PACS1-202ENST00000524784 U2AF1Q01081 240 aaKnown RBP eCLIP14.08□□□□□ -0.16
PACS1-202ENST00000524784 KIF24Q5T7B8 1368 aa14.08□□□□□ -0.16
PACS1-202ENST00000524784 MAP2P11137 1827 aaKnown RBP14.07□□□□□ -0.16
PACS1-202ENST00000524784 ZBTB7CA1YPR0 619 aa14.07□□□□□ -0.16
PACS1-202ENST00000524784 HAP1P54257 671 aaPredicted RBP14.07□□□□□ -0.16
PACS1-202ENST00000524784 PNNQ9H307 717 aaKnown RBP14.07□□□□□ -0.16
PACS1-202ENST00000524784 USP54Q70EL1 1684 aa14.07□□□□□ -0.16
PACS1-202ENST00000524784 FLT4P35916 1363 aa14.07□□□□□ -0.16
PACS1-202ENST00000524784 CENPBP07199 599 aaPredicted RBP14.06□□□□□ -0.16
PACS1-202ENST00000524784 ALS2Q96Q42 1657 aa14.05□□□□□ -0.16
PACS1-202ENST00000524784 ROBO1Q9Y6N7 1651 aa14.05□□□□□ -0.16
PACS1-202ENST00000524784 IL13P35225 146 aa14.05□□□□□ -0.16
PACS1-202ENST00000524784 HSP90AB2PQ58FF8 381 aa14.05□□□□□ -0.16
PACS1-202ENST00000524784 CABLES1Q8TDN4 633 aa14.05□□□□□ -0.16
PACS1-202ENST00000524784 SLIT3O75094 1523 aa14.05□□□□□ -0.16
PACS1-202ENST00000524784 NHSL1Q5SYE7 1610 aa14.04□□□□□ -0.16
PACS1-202ENST00000524784 HOXC9P31274 260 aa14.04□□□□□ -0.16
PACS1-202ENST00000524784 ZC3H6P61129 1189 aaKnown RBP14.04□□□□□ -0.16
PACS1-202ENST00000524784 ARHGEF25Q86VW2 580 aa14.04□□□□□ -0.16
PACS1-202ENST00000524784 IP6K1Q92551 441 aa14.04□□□□□ -0.16
PACS1-202ENST00000524784 RTL1A6NKG5 1358 aa14.04□□□□□ -0.16
PACS1-202ENST00000524784 COL3A1P02461 1466 aaPredicted RBP14.04□□□□□ -0.16
PACS1-202ENST00000524784 NEFMP07197 916 aa14.03□□□□□ -0.16
PACS1-202ENST00000524784 EIF4A2Q14240 407 aaKnown RBP14.03□□□□□ -0.16
PACS1-202ENST00000524784 AHDC1Q5TGY3 1603 aaPredicted RBP14.03□□□□□ -0.16
PACS1-202ENST00000524784 MARF1Q9Y4F3 1742 aaKnown RBP14.03□□□□□ -0.16
PACS1-202ENST00000524784 FCHSD2O94868 740 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms