RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 DDX11L8A8MPP1 907 aa8.3□□□□□ -1.08
LIN7C-202ENST00000524596 IBSPP21815 317 aaPredicted RBP8.3□□□□□ -1.08
LIN7C-202ENST00000524596 ZMAT2Q96NC0 199 aaKnown RBP8.3□□□□□ -1.08
LIN7C-202ENST00000524596 FEZ1Q99689 392 aa8.3□□□□□ -1.08
LIN7C-202ENST00000524596 FAM107BQ9H098 131 aa8.3□□□□□ -1.08
LIN7C-202ENST00000524596 DONSONQ9NYP3 566 aa8.3□□□□□ -1.08
LIN7C-202ENST00000524596 SHTN1A0MZ66 631 aa8.3□□□□□ -1.08
LIN7C-202ENST00000524596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.3□□□□□ -1.08
LIN7C-202ENST00000524596 CHMP4CQ96CF2 233 aa8.3□□□□□ -1.08
LIN7C-202ENST00000524596 ATICP31939 592 aa8.3□□□□□ -1.08
LIN7C-202ENST00000524596 PSEN1P49768 467 aa8.3□□□□□ -1.08
LIN7C-202ENST00000524596 SLMAPQ14BN4 828 aa8.3□□□□□ -1.08
LIN7C-202ENST00000524596 CCAR1Q8IX12 1150 aaKnown RBP8.3□□□□□ -1.08
LIN7C-202ENST00000524596 MPP4Q96JB8 637 aa8.3□□□□□ -1.08
LIN7C-202ENST00000524596 DRC1Q96MC2 740 aa8.3□□□□□ -1.08
LIN7C-202ENST00000524596 UBA5Q9GZZ9 404 aa8.3□□□□□ -1.08
LIN7C-202ENST00000524596 FAM184AQ8NB25 1140 aa8.29□□□□□ -1.08
LIN7C-202ENST00000524596 NINLQ9Y2I6 1382 aa8.29□□□□□ -1.08
LIN7C-202ENST00000524596 PEX19P40855 299 aa8.29□□□□□ -1.08
LIN7C-202ENST00000524596 IRX1P78414 480 aaPredicted RBP8.29□□□□□ -1.08
LIN7C-202ENST00000524596 PIAS4Q8N2W9 510 aaPredicted RBP8.29□□□□□ -1.08
LIN7C-202ENST00000524596 USP25Q9UHP3 1055 aa8.29□□□□□ -1.08
LIN7C-202ENST00000524596 NF2P35240 595 aa8.29□□□□□ -1.08
LIN7C-202ENST00000524596 TPM4P67936 248 aa8.29□□□□□ -1.08
LIN7C-202ENST00000524596 ENOX2Q16206 610 aaKnown RBP8.29□□□□□ -1.08
LIN7C-202ENST00000524596 CCDC73Q6ZRK6 1079 aa8.29□□□□□ -1.08
LIN7C-202ENST00000524596 CCDC82Q8N4S0 544 aa8.29□□□□□ -1.08
LIN7C-202ENST00000524596 CCDC196A0A1B0GTZ2 297 aa8.29□□□□□ -1.08
LIN7C-202ENST00000524596 OFD1O75665 1012 aa8.29□□□□□ -1.08
LIN7C-202ENST00000524596 SKOR2Q2VWA4 1001 aaPredicted RBP8.29□□□□□ -1.08
LIN7C-202ENST00000524596 MICAL1Q8TDZ2 1067 aa8.29□□□□□ -1.08
LIN7C-202ENST00000524596 IKBKGQ9Y6K9 419 aa8.29□□□□□ -1.08
LIN7C-202ENST00000524596 KIAA0754O94854 1291 aa8.28□□□□□ -1.08
LIN7C-202ENST00000524596 MTA1Q13330 715 aa8.28□□□□□ -1.08
LIN7C-202ENST00000524596 ABCF2Q9UG63 623 aa8.28□□□□□ -1.08
LIN7C-202ENST00000524596 CT47B1P0C2W7 299 aaPredicted RBP8.28□□□□□ -1.08
LIN7C-202ENST00000524596 TRHP20396 242 aaPredicted RBP8.28□□□□□ -1.08
LIN7C-202ENST00000524596 BRPF1P55201 1214 aaPredicted RBP8.28□□□□□ -1.08
LIN7C-202ENST00000524596 CCDC96Q2M329 555 aa8.28□□□□□ -1.08
LIN7C-202ENST00000524596 A0A1B0GUA9 196 aa8.28□□□□□ -1.08
LIN7C-202ENST00000524596 NEBLO76041 1014 aa8.28□□□□□ -1.08
LIN7C-202ENST00000524596 DDX11Q96FC9 970 aa8.28□□□□□ -1.08
LIN7C-202ENST00000524596 SMAPO00193 183 aa8.27□□□□□ -1.09
LIN7C-202ENST00000524596 PDCD2Q16342 344 aaPredicted RBP8.27□□□□□ -1.09
LIN7C-202ENST00000524596 ATL2Q8NHH9 583 aa8.27□□□□□ -1.09
LIN7C-202ENST00000524596 SUFUQ9UMX1 484 aa8.27□□□□□ -1.09
LIN7C-202ENST00000524596 EPB41L2O43491 1005 aaKnown RBP8.27□□□□□ -1.09
LIN7C-202ENST00000524596 TXLNBQ8N3L3 684 aa8.27□□□□□ -1.09
LIN7C-202ENST00000524596 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.27□□□□□ -1.09
LIN7C-202ENST00000524596 CCDC125Q86Z20 511 aa8.27□□□□□ -1.09
LIN7C-202ENST00000524596 CCDC47Q96A33 483 aaKnown RBP8.27□□□□□ -1.09
LIN7C-202ENST00000524596 KDM4CQ9H3R0 1056 aa8.27□□□□□ -1.09
LIN7C-202ENST00000524596 TPX2Q9ULW0 747 aaKnown RBP8.26□□□□□ -1.09
LIN7C-202ENST00000524596 ZBTB9Q96C00 473 aa8.26□□□□□ -1.09
LIN7C-202ENST00000524596 SCP2P22307 547 aa8.26□□□□□ -1.09
LIN7C-202ENST00000524596 NUCB2P80303 420 aa8.26□□□□□ -1.09
LIN7C-202ENST00000524596 CRACR2AQ9BSW2 395 aa8.26□□□□□ -1.09
LIN7C-202ENST00000524596 IPO5O00410 1097 aaKnown RBP8.26□□□□□ -1.09
LIN7C-202ENST00000524596 TRAF1Q13077 416 aa8.26□□□□□ -1.09
LIN7C-202ENST00000524596 ZBTB17Q13105 803 aa8.26□□□□□ -1.09
LIN7C-202ENST00000524596 CCDC152Q4G0S7 254 aa8.26□□□□□ -1.09
LIN7C-202ENST00000524596 MICALCLQ6ZW33 695 aa8.26□□□□□ -1.09
LIN7C-202ENST00000524596 SPOCK3Q9BQ16 436 aa8.26□□□□□ -1.09
LIN7C-202ENST00000524596 ACBD3Q9H3P7 528 aa8.26□□□□□ -1.09
LIN7C-202ENST00000524596 SLC52A1Q9NWF4 448 aa8.26□□□□□ -1.09
LIN7C-202ENST00000524596 STK26Q9P289 416 aa8.26□□□□□ -1.09
LIN7C-202ENST00000524596 CCDC39Q9UFE4 941 aa8.26□□□□□ -1.09
LIN7C-202ENST00000524596 ANKRD18AQ8IVF6 992 aa8.25□□□□□ -1.09
LIN7C-202ENST00000524596 ZHX3Q9H4I2 956 aa8.25□□□□□ -1.09
LIN7C-202ENST00000524596 CTDP1Q9Y5B0 961 aaPredicted RBP8.25□□□□□ -1.09
LIN7C-202ENST00000524596 SSFA2P28290 1259 aa8.25□□□□□ -1.09
LIN7C-202ENST00000524596 CC2D1AQ6P1N0 951 aaPredicted RBP8.25□□□□□ -1.09
LIN7C-202ENST00000524596 C16orf87Q6PH81 154 aa8.25□□□□□ -1.09
LIN7C-202ENST00000524596 GBP6Q6ZN66 633 aa8.25□□□□□ -1.09
LIN7C-202ENST00000524596 PPFIA3O75145 1194 aa8.25□□□□□ -1.09
LIN7C-202ENST00000524596 CCDC65Q8IXS2 484 aa8.25□□□□□ -1.09
LIN7C-202ENST00000524596 PRIMPOLQ96LW4 560 aa8.25□□□□□ -1.09
LIN7C-202ENST00000524596 SH3GL3Q99963 347 aa8.25□□□□□ -1.09
LIN7C-202ENST00000524596 COPB2P35606 906 aa8.24□□□□□ -1.09
LIN7C-202ENST00000524596 PRPF4BQ13523 1007 aaKnown RBP8.24□□□□□ -1.09
LIN7C-202ENST00000524596 GIGYF2Q6Y7W6 1299 aaKnown RBP8.24□□□□□ -1.09
LIN7C-202ENST00000524596 OGFOD1Q8N543 542 aa8.24□□□□□ -1.09
LIN7C-202ENST00000524596 RBM33Q96EV2 1170 aaKnown RBP8.24□□□□□ -1.09
LIN7C-202ENST00000524596 RSRC1Q96IZ7 334 aaKnown RBP8.24□□□□□ -1.09
LIN7C-202ENST00000524596 ARGLU1Q9NWB6 273 aaPredicted RBP8.24□□□□□ -1.09
LIN7C-202ENST00000524596 CREB3O43889 395 aa8.24□□□□□ -1.09
LIN7C-202ENST00000524596 CEP104O60308 925 aa8.24□□□□□ -1.09
LIN7C-202ENST00000524596 CCDC92Q53HC0 331 aaPredicted RBP8.24□□□□□ -1.09
LIN7C-202ENST00000524596 MED4Q9NPJ6 270 aa8.24□□□□□ -1.09
LIN7C-202ENST00000524596 GOLGA6L9A6NEM1 432 aa8.24□□□□□ -1.09
LIN7C-202ENST00000524596 NEXNQ0ZGT2 675 aa8.24□□□□□ -1.09
LIN7C-202ENST00000524596 TRIML1Q8N9V2 468 aa8.24□□□□□ -1.09
LIN7C-202ENST00000524596 CXorf56Q9H5V9 222 aa8.24□□□□□ -1.09
LIN7C-202ENST00000524596 OGFRQ9NZT2 677 aa8.24□□□□□ -1.09
LIN7C-202ENST00000524596 SAFB2Q14151 953 aaKnown RBP eCLIP8.23□□□□□ -1.09
LIN7C-202ENST00000524596 KLHL10Q6JEL2 608 aa8.23□□□□□ -1.09
LIN7C-202ENST00000524596 U2SURPO15042 1029 aaKnown RBP8.23□□□□□ -1.09
LIN7C-202ENST00000524596 MS4A1P11836 297 aa8.23□□□□□ -1.09
LIN7C-202ENST00000524596 PAX3P23760 479 aa8.23□□□□□ -1.09
LIN7C-202ENST00000524596 MCM5P33992 734 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms