RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 DLC1Q96QB1 1528 aa12.41□□□□□ -0.42
CTNNA1-242ENST00000524292 SAFB2Q14151 953 aaKnown RBP eCLIP12.4□□□□□ -0.42
CTNNA1-242ENST00000524292 QTRT2Q9H974 415 aaKnown RBP12.4□□□□□ -0.42
CTNNA1-242ENST00000524292 KDM2AQ9Y2K7 1162 aa12.4□□□□□ -0.42
CTNNA1-242ENST00000524292 RBM6P78332 1123 aaKnown RBP12.39□□□□□ -0.43
CTNNA1-242ENST00000524292 SP7Q8TDD2 431 aaPredicted RBP12.38□□□□□ -0.43
CTNNA1-242ENST00000524292 USP21Q9UK80 565 aa12.38□□□□□ -0.43
CTNNA1-242ENST00000524292 EIF3AQ14152 1382 aaKnown RBP12.38□□□□□ -0.43
CTNNA1-242ENST00000524292 ADGRB1O14514 1584 aa12.38□□□□□ -0.43
CTNNA1-242ENST00000524292 PAK3O75914 559 aaPredicted RBP12.37□□□□□ -0.43
CTNNA1-242ENST00000524292 PSME1Q06323 249 aa12.37□□□□□ -0.43
CTNNA1-242ENST00000524292 TRPC5Q9UL62 973 aaPredicted RBP12.37□□□□□ -0.43
CTNNA1-242ENST00000524292 PHF8Q9UPP1 1060 aa12.37□□□□□ -0.43
CTNNA1-242ENST00000524292 TRAK1Q9UPV9 953 aa12.37□□□□□ -0.43
CTNNA1-242ENST00000524292 ANKARQ7Z5J8 1434 aa12.37□□□□□ -0.43
CTNNA1-242ENST00000524292 ADGRB2O60241 1585 aa12.36□□□□□ -0.43
CTNNA1-242ENST00000524292 KRT28Q7Z3Y7 464 aa12.36□□□□□ -0.43
CTNNA1-242ENST00000524292 FNBP4Q8N3X1 1017 aaPredicted RBP12.36□□□□□ -0.43
CTNNA1-242ENST00000524292 RGS12O14924 1447 aa12.36□□□□□ -0.43
CTNNA1-242ENST00000524292 SPATA31A3Q5VYP0 1347 aa12.36□□□□□ -0.43
CTNNA1-242ENST00000524292 KLHL34Q8N239 644 aa12.35□□□□□ -0.43
CTNNA1-242ENST00000524292 TNS3Q68CZ2 1445 aa12.35□□□□□ -0.43
CTNNA1-242ENST00000524292 HAP1P54257 671 aaPredicted RBP12.34□□□□□ -0.43
CTNNA1-242ENST00000524292 UPF1Q92900 1129 aaKnown RBP eCLIP12.34□□□□□ -0.43
CTNNA1-242ENST00000524292 MINK1Q8N4C8 1332 aaPredicted RBP12.34□□□□□ -0.43
CTNNA1-242ENST00000524292 SBNO1A3KN83 1393 aa12.33□□□□□ -0.44
CTNNA1-242ENST00000524292 ARHGEF10O15013 1369 aa12.33□□□□□ -0.44
CTNNA1-242ENST00000524292 HIRIP3Q9BW71 556 aaPredicted RBP12.33□□□□□ -0.44
CTNNA1-242ENST00000524292 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
CTNNA1-242ENST00000524292 MARF1Q9Y4F3 1742 aaKnown RBP12.32□□□□□ -0.44
CTNNA1-242ENST00000524292 ATRNO75882 1429 aa12.32□□□□□ -0.44
CTNNA1-242ENST00000524292 LMOD2Q6P5Q4 547 aa12.32□□□□□ -0.44
CTNNA1-242ENST00000524292 RGPD8O14715 1765 aaPredicted RBP12.32□□□□□ -0.44
CTNNA1-242ENST00000524292 TULP4Q9NRJ4 1543 aa12.32□□□□□ -0.44
CTNNA1-242ENST00000524292 GPRASP1Q5JY77 1395 aa12.31□□□□□ -0.44
CTNNA1-242ENST00000524292 NUBP1P53384 320 aa12.31□□□□□ -0.44
CTNNA1-242ENST00000524292 IFNLR1Q8IU57 520 aaPredicted RBP12.31□□□□□ -0.44
CTNNA1-242ENST00000524292 PMFBP1Q8TBY8 1022 aa12.31□□□□□ -0.44
CTNNA1-242ENST00000524292 ATAD2Q6PL18 1390 aa12.3□□□□□ -0.44
CTNNA1-242ENST00000524292 USP32Q8NFA0 1604 aa12.3□□□□□ -0.44
CTNNA1-242ENST00000524292 BCL9LQ86UU0 1499 aa12.3□□□□□ -0.44
CTNNA1-242ENST00000524292 WASLO00401 505 aaPredicted RBP12.3□□□□□ -0.44
CTNNA1-242ENST00000524292 RASEFQ8IZ41 740 aa12.3□□□□□ -0.44
CTNNA1-242ENST00000524292 ZNF579Q8NAF0 562 aaKnown RBP12.29□□□□□ -0.44
CTNNA1-242ENST00000524292 ARHGEF28Q8N1W1 1705 aaKnown RBP12.28□□□□□ -0.44
CTNNA1-242ENST00000524292 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.28□□□□□ -0.44
CTNNA1-242ENST00000524292 UNC5CLQ8IV45 518 aa12.28□□□□□ -0.44
CTNNA1-242ENST00000524292 NGDNQ8NEJ9 315 aaKnown RBP12.28□□□□□ -0.44
CTNNA1-242ENST00000524292 GJD4Q96KN9 370 aaPredicted RBP12.28□□□□□ -0.44
CTNNA1-242ENST00000524292 TSPYL2Q9H2G4 693 aaPredicted RBP12.28□□□□□ -0.44
CTNNA1-242ENST00000524292 KIAA1210Q9ULL0 1709 aa12.28□□□□□ -0.44
CTNNA1-242ENST00000524292 SLIT2O94813 1529 aa12.27□□□□□ -0.44
CTNNA1-242ENST00000524292 CABLES1Q8TDN4 633 aa12.27□□□□□ -0.45
CTNNA1-242ENST00000524292 PRR36Q9H6K5 1346 aa12.27□□□□□ -0.45
CTNNA1-242ENST00000524292 ITSN1Q15811 1721 aa12.25□□□□□ -0.45
CTNNA1-242ENST00000524292 ATP7BP35670 1465 aa12.25□□□□□ -0.45
CTNNA1-242ENST00000524292 RALGAPBQ86X10 1494 aa12.25□□□□□ -0.45
CTNNA1-242ENST00000524292 ABCA3Q99758 1704 aa12.25□□□□□ -0.45
CTNNA1-242ENST00000524292 TRPM3Q9HCF6 1732 aaPredicted RBP12.25□□□□□ -0.45
CTNNA1-242ENST00000524292 NUDT16Q96DE0 195 aaKnown RBP12.24□□□□□ -0.45
CTNNA1-242ENST00000524292 FAM212AQ96EL1 285 aa12.24□□□□□ -0.45
CTNNA1-242ENST00000524292 CCDC9Q9Y3X0 531 aaKnown RBP12.24□□□□□ -0.45
CTNNA1-242ENST00000524292 NWD2Q9ULI1 1742 aa12.23□□□□□ -0.45
CTNNA1-242ENST00000524292 PLCH1Q4KWH8 1693 aa12.23□□□□□ -0.45
CTNNA1-242ENST00000524292 VPS72Q15906 364 aa12.23□□□□□ -0.45
CTNNA1-242ENST00000524292 SPOCK2Q92563 424 aa12.23□□□□□ -0.45
CTNNA1-242ENST00000524292 CDK19Q9BWU1 502 aa12.23□□□□□ -0.45
CTNNA1-242ENST00000524292 ALS2Q96Q42 1657 aa12.22□□□□□ -0.45
CTNNA1-242ENST00000524292 EP400Q96L91 3159 aa12.22□□□□□ -0.45
CTNNA1-242ENST00000524292 NBPF1Q3BBV0 1214 aa12.22□□□□□ -0.45
CTNNA1-242ENST00000524292 GLI3P10071 1580 aa12.22□□□□□ -0.45
CTNNA1-242ENST00000524292 CENPJQ9HC77 1338 aaPredicted RBP12.21□□□□□ -0.45
CTNNA1-242ENST00000524292 CLCN6P51797 869 aa12.21□□□□□ -0.45
CTNNA1-242ENST00000524292 CCDC61Q9Y6R9 512 aa12.21□□□□□ -0.45
CTNNA1-242ENST00000524292 FAM83GA6ND36 823 aa12.2□□□□□ -0.46
CTNNA1-242ENST00000524292 SRPK2P78362 688 aaKnown RBP12.2□□□□□ -0.46
CTNNA1-242ENST00000524292 CCDC125Q86Z20 511 aa12.2□□□□□ -0.46
CTNNA1-242ENST00000524292 L3MBTL2Q969R5 705 aa12.2□□□□□ -0.46
CTNNA1-242ENST00000524292 PHF12Q96QT6 1004 aa12.2□□□□□ -0.46
CTNNA1-242ENST00000524292 TOPAZ1Q8N9V7 1692 aa12.19□□□□□ -0.46
CTNNA1-242ENST00000524292 POLR3AO14802 1390 aaPredicted RBP12.19□□□□□ -0.46
CTNNA1-242ENST00000524292 A0A0G2JS52 829 aa12.19□□□□□ -0.46
CTNNA1-242ENST00000524292 GABBR2O75899 941 aa12.19□□□□□ -0.46
CTNNA1-242ENST00000524292 MYT1Q01538 1121 aa12.19□□□□□ -0.46
CTNNA1-242ENST00000524292 PRDM11Q9NQV5 511 aa12.19□□□□□ -0.46
CTNNA1-242ENST00000524292 BTG4Q9NY30 223 aa12.19□□□□□ -0.46
CTNNA1-242ENST00000524292 COL14A1Q05707 1796 aaKnown RBP12.19□□□□□ -0.46
CTNNA1-242ENST00000524292 ACEP12821 1306 aa12.18□□□□□ -0.46
CTNNA1-242ENST00000524292 NEUROD1Q13562 356 aa12.18□□□□□ -0.46
CTNNA1-242ENST00000524292 SEPT12Q8IYM1 358 aa12.18□□□□□ -0.46
CTNNA1-242ENST00000524292 PLEKHG3A1L390 1219 aa12.17□□□□□ -0.46
CTNNA1-242ENST00000524292 NBPF8Q3BBV2 869 aa12.17□□□□□ -0.46
CTNNA1-242ENST00000524292 PPIP5K1Q6PFW1 1433 aa12.17□□□□□ -0.46
CTNNA1-242ENST00000524292 ROCK2O75116 1388 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-242ENST00000524292 QRICH2Q9H0J4 1663 aa12.16□□□□□ -0.46
CTNNA1-242ENST00000524292 SIN3AQ96ST3 1273 aa12.16□□□□□ -0.46
CTNNA1-242ENST00000524292 BLMP54132 1417 aaPredicted RBP12.16□□□□□ -0.46
CTNNA1-242ENST00000524292 NRAPQ86VF7 1730 aa12.16□□□□□ -0.46
CTNNA1-242ENST00000524292 CRYBG1Q9Y4K1 1723 aa12.16□□□□□ -0.46
CTNNA1-242ENST00000524292 ONECUT3O60422 494 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms