RNA–Protein interactions for RNA: ENST00000524215.5

RUNX1T1-247, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 4

Gene RUNX1T1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-247ENST00000524215 NWD2Q9ULI1 1742 aa13.14□□□□□ -0.31
RUNX1T1-247ENST00000524215 PLEKHG5O94827 1062 aa13.14□□□□□ -0.31
RUNX1T1-247ENST00000524215 SRPK2P78362 688 aaKnown RBP13.14□□□□□ -0.31
RUNX1T1-247ENST00000524215 TRIM26Q12899 539 aaPredicted RBP13.14□□□□□ -0.31
RUNX1T1-247ENST00000524215 NBPF1Q3BBV0 1214 aa13.14□□□□□ -0.31
RUNX1T1-247ENST00000524215 UNC5CLQ8IV45 518 aa13.14□□□□□ -0.31
RUNX1T1-247ENST00000524215 CCDC61Q9Y6R9 512 aa13.14□□□□□ -0.31
RUNX1T1-247ENST00000524215 ROCK2O75116 1388 aaKnown RBP13.14□□□□□ -0.31
RUNX1T1-247ENST00000524215 ALS2Q96Q42 1657 aa13.14□□□□□ -0.31
RUNX1T1-247ENST00000524215 TRPM1Q7Z4N2 1603 aa13.13□□□□□ -0.31
RUNX1T1-247ENST00000524215 TOPAZ1Q8N9V7 1692 aa13.13□□□□□ -0.31
RUNX1T1-247ENST00000524215 TONSLQ96HA7 1378 aa13.13□□□□□ -0.31
RUNX1T1-247ENST00000524215 SIN3AQ96ST3 1273 aa13.13□□□□□ -0.31
RUNX1T1-247ENST00000524215 SLIT2O94813 1529 aa13.13□□□□□ -0.31
RUNX1T1-247ENST00000524215 PLCH1Q4KWH8 1693 aa13.12□□□□□ -0.31
RUNX1T1-247ENST00000524215 CABLES1Q8TDN4 633 aa13.12□□□□□ -0.31
RUNX1T1-247ENST00000524215 GJD4Q96KN9 370 aaPredicted RBP13.12□□□□□ -0.31
RUNX1T1-247ENST00000524215 CCDC9Q9Y3X0 531 aaKnown RBP13.12□□□□□ -0.31
RUNX1T1-247ENST00000524215 EVC2Q86UK5 1308 aa13.11□□□□□ -0.31
RUNX1T1-247ENST00000524215 POLR3AO14802 1390 aaPredicted RBP13.1□□□□□ -0.31
RUNX1T1-247ENST00000524215 BRD4O60885 1362 aaPredicted RBP13.1□□□□□ -0.31
RUNX1T1-247ENST00000524215 COL14A1Q05707 1796 aaKnown RBP13.1□□□□□ -0.31
RUNX1T1-247ENST00000524215 DEFB132Q7Z7B7 95 aa13.1□□□□□ -0.31
RUNX1T1-247ENST00000524215 PPIP5K1Q6PFW1 1433 aa13.1□□□□□ -0.31
RUNX1T1-247ENST00000524215 RALGAPBQ86X10 1494 aa13.09□□□□□ -0.31
RUNX1T1-247ENST00000524215 ACEP12821 1306 aa13.09□□□□□ -0.31
RUNX1T1-247ENST00000524215 PLEKHG3A1L390 1219 aa13.08□□□□□ -0.32
RUNX1T1-247ENST00000524215 VPS72Q15906 364 aa13.08□□□□□ -0.32
RUNX1T1-247ENST00000524215 NBPF8Q3BBV2 869 aa13.08□□□□□ -0.32
RUNX1T1-247ENST00000524215 PRDM11Q9NQV5 511 aa13.08□□□□□ -0.32
RUNX1T1-247ENST00000524215 A0A0G2JS52 829 aa13.07□□□□□ -0.32
RUNX1T1-247ENST00000524215 MYT1Q01538 1121 aa13.07□□□□□ -0.32
RUNX1T1-247ENST00000524215 PHRF1Q9P1Y6 1649 aaKnown RBP13.06□□□□□ -0.32
RUNX1T1-247ENST00000524215 CABP2Q9NPB3 220 aa13.06□□□□□ -0.32
RUNX1T1-247ENST00000524215 BTG4Q9NY30 223 aa13.06□□□□□ -0.32
RUNX1T1-247ENST00000524215 GLI3P10071 1580 aa13.06□□□□□ -0.32
RUNX1T1-247ENST00000524215 CRYBG1Q9Y4K1 1723 aa13.05□□□□□ -0.32
RUNX1T1-247ENST00000524215 ABTB2Q8N961 1025 aa13.05□□□□□ -0.32
RUNX1T1-247ENST00000524215 CARD11Q9BXL7 1154 aa13.05□□□□□ -0.32
RUNX1T1-247ENST00000524215 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
RUNX1T1-247ENST00000524215 FAM83GA6ND36 823 aa13.04□□□□□ -0.32
RUNX1T1-247ENST00000524215 NLRP13Q86W25 1043 aa13.04□□□□□ -0.32
RUNX1T1-247ENST00000524215 NRAPQ86VF7 1730 aa13.04□□□□□ -0.32
RUNX1T1-247ENST00000524215 UTRNP46939 3433 aa13.04□□□□□ -0.32
RUNX1T1-247ENST00000524215 KIAA0232Q92628 1395 aa13.03□□□□□ -0.32
RUNX1T1-247ENST00000524215 SBNO2Q9Y2G9 1366 aa13.03□□□□□ -0.32
RUNX1T1-247ENST00000524215 CAPN15O75808 1086 aa13.02□□□□□ -0.33
RUNX1T1-247ENST00000524215 SEPT12Q8IYM1 358 aa13.02□□□□□ -0.33
RUNX1T1-247ENST00000524215 CABP1Q9NZU7 370 aa13.02□□□□□ -0.33
RUNX1T1-247ENST00000524215 USP6P35125 1406 aa13.02□□□□□ -0.33
RUNX1T1-247ENST00000524215 SLC24A1O60721 1099 aa13.01□□□□□ -0.33
RUNX1T1-247ENST00000524215 SF3B2Q13435 895 aaKnown RBP13.01□□□□□ -0.33
RUNX1T1-247ENST00000524215 NUTM2GQ5VZR2 741 aa13.01□□□□□ -0.33
RUNX1T1-247ENST00000524215 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
RUNX1T1-247ENST00000524215 NRKQ7Z2Y5 1582 aa13.01□□□□□ -0.33
RUNX1T1-247ENST00000524215 USP19O94966 1318 aa13□□□□□ -0.33
RUNX1T1-247ENST00000524215 ZC3H6P61129 1189 aaKnown RBP13□□□□□ -0.33
RUNX1T1-247ENST00000524215 CPDO75976 1380 aa12.99□□□□□ -0.33
RUNX1T1-247ENST00000524215 EVA1CP58658 441 aa12.99□□□□□ -0.33
RUNX1T1-247ENST00000524215 NLRP6P59044 892 aa12.99□□□□□ -0.33
RUNX1T1-247ENST00000524215 FAM98CQ17RN3 349 aaKnown RBP12.99□□□□□ -0.33
RUNX1T1-247ENST00000524215 KRT27Q7Z3Y8 459 aa12.99□□□□□ -0.33
RUNX1T1-247ENST00000524215 SPATA31A5Q5VU36 1347 aa12.98□□□□□ -0.33
RUNX1T1-247ENST00000524215 SPATA31A7Q8IWB4 1347 aa12.98□□□□□ -0.33
RUNX1T1-247ENST00000524215 BRWD3Q6RI45 1802 aa12.98□□□□□ -0.33
RUNX1T1-247ENST00000524215 ONECUT3O60422 494 aaPredicted RBP12.98□□□□□ -0.33
RUNX1T1-247ENST00000524215 STRN4Q9NRL3 753 aa12.98□□□□□ -0.33
RUNX1T1-247ENST00000524215 TTC21AQ8NDW8 1320 aa12.97□□□□□ -0.33
RUNX1T1-247ENST00000524215 CHRNA2Q15822 529 aa12.97□□□□□ -0.33
RUNX1T1-247ENST00000524215 AKAP12Q02952 1782 aa12.97□□□□□ -0.33
RUNX1T1-247ENST00000524215 KTN1Q86UP2 1357 aaKnown RBP12.96□□□□□ -0.33
RUNX1T1-247ENST00000524215 GCP02774 474 aa12.96□□□□□ -0.33
RUNX1T1-247ENST00000524215 HDGFL2Q7Z4V5 671 aaPredicted RBP12.96□□□□□ -0.33
RUNX1T1-247ENST00000524215 KCNH5Q8NCM2 988 aa12.96□□□□□ -0.33
RUNX1T1-247ENST00000524215 SSH2Q76I76 1423 aa12.96□□□□□ -0.34
RUNX1T1-247ENST00000524215 SLIT3O75094 1523 aa12.95□□□□□ -0.34
RUNX1T1-247ENST00000524215 ZBTB7CA1YPR0 619 aa12.95□□□□□ -0.34
RUNX1T1-247ENST00000524215 DCAF8L1A6NGE4 600 aa12.95□□□□□ -0.34
RUNX1T1-247ENST00000524215 SPATA31A1Q5TZJ5 1347 aa12.94□□□□□ -0.34
RUNX1T1-247ENST00000524215 CLSPNQ9HAW4 1339 aa12.94□□□□□ -0.34
RUNX1T1-247ENST00000524215 PIK3C2AO00443 1686 aa12.94□□□□□ -0.34
RUNX1T1-247ENST00000524215 TMC1Q8TDI8 760 aa12.94□□□□□ -0.34
RUNX1T1-247ENST00000524215 TERF2IPQ9NYB0 399 aa12.94□□□□□ -0.34
RUNX1T1-247ENST00000524215 NINLQ9Y2I6 1382 aa12.94□□□□□ -0.34
RUNX1T1-247ENST00000524215 MON2Q7Z3U7 1717 aa12.93□□□□□ -0.34
RUNX1T1-247ENST00000524215 TTC21BQ7Z4L5 1316 aa12.93□□□□□ -0.34
RUNX1T1-247ENST00000524215 LMO7Q8WWI1 1683 aa12.93□□□□□ -0.34
RUNX1T1-247ENST00000524215 THSD7AQ9UPZ6 1657 aa12.93□□□□□ -0.34
RUNX1T1-247ENST00000524215 PUS7Q96PZ0 661 aaKnown RBP12.93□□□□□ -0.34
RUNX1T1-247ENST00000524215 CPSF1Q10570 1443 aaKnown RBP12.93□□□□□ -0.34
RUNX1T1-247ENST00000524215 AATKQ6ZMQ8 1374 aa12.93□□□□□ -0.34
RUNX1T1-247ENST00000524215 BAG6P46379 1132 aa12.92□□□□□ -0.34
RUNX1T1-247ENST00000524215 R3HDM1Q15032 1099 aaKnown RBP12.92□□□□□ -0.34
RUNX1T1-247ENST00000524215 TIMELESSQ9UNS1 1208 aa12.92□□□□□ -0.34
RUNX1T1-247ENST00000524215 THRAP3Q9Y2W1 955 aaKnown RBP12.92□□□□□ -0.34
RUNX1T1-247ENST00000524215 CAMTA1Q9Y6Y1 1673 aa12.92□□□□□ -0.34
RUNX1T1-247ENST00000524215 RGPD1P0DJD0 1748 aa12.91□□□□□ -0.34
RUNX1T1-247ENST00000524215 PDE3BQ13370 1112 aa12.91□□□□□ -0.34
RUNX1T1-247ENST00000524215 BARGINQ6ZT62 677 aa12.91□□□□□ -0.34
RUNX1T1-247ENST00000524215 TCP11L2Q8N4U5 519 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms