RNA–Protein interactions for RNA: ENST00000524177.5

CSMD1-214, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-214ENST00000524177 GOPCQ9HD26 462 aa6.76□□□□□ -1.33
CSMD1-214ENST00000524177 SH3BP2P78314 561 aa6.75□□□□□ -1.33
CSMD1-214ENST00000524177 RETREG3Q86VR2 466 aa6.75□□□□□ -1.33
CSMD1-214ENST00000524177 ZMYND15Q9H091 742 aa6.75□□□□□ -1.33
CSMD1-214ENST00000524177 NPAS3Q8IXF0 933 aa6.74□□□□□ -1.33
CSMD1-214ENST00000524177 H3BM21 787 aa6.73□□□□□ -1.33
CSMD1-214ENST00000524177 CLCN1P35523 988 aa6.73□□□□□ -1.33
CSMD1-214ENST00000524177 NUTM1Q86Y26 1132 aa6.73□□□□□ -1.33
CSMD1-214ENST00000524177 ZFP42Q96MM3 310 aa6.73□□□□□ -1.33
CSMD1-214ENST00000524177 GPCPD1Q9NPB8 672 aa6.73□□□□□ -1.33
CSMD1-214ENST00000524177 FAM217BQ9NTX9 383 aaPredicted RBP6.73□□□□□ -1.33
CSMD1-214ENST00000524177 TLL2Q9Y6L7 1015 aa6.73□□□□□ -1.33
CSMD1-214ENST00000524177 ERBB4Q15303 1308 aa6.73□□□□□ -1.33
CSMD1-214ENST00000524177 C6orf229H3BNL8 230 aa6.72□□□□□ -1.33
CSMD1-214ENST00000524177 CCNYL3P0C7X3 344 aa6.72□□□□□ -1.33
CSMD1-214ENST00000524177 LINC01559Q495D7 138 aa6.72□□□□□ -1.33
CSMD1-214ENST00000524177 RSPH6AQ9H0K4 717 aa6.72□□□□□ -1.33
CSMD1-214ENST00000524177 PCDHGC3Q9UN70 934 aa6.72□□□□□ -1.33
CSMD1-214ENST00000524177 FDX1P10109 184 aa6.71□□□□□ -1.34
CSMD1-214ENST00000524177 SH3D19Q5HYK7 790 aa6.71□□□□□ -1.34
CSMD1-214ENST00000524177 UNC93B1Q9H1C4 597 aa6.71□□□□□ -1.34
CSMD1-214ENST00000524177 BAP1Q92560 729 aa6.7□□□□□ -1.34
CSMD1-214ENST00000524177 FLIIQ13045 1269 aa6.69□□□□□ -1.34
CSMD1-214ENST00000524177 NNTQ13423 1086 aa6.69□□□□□ -1.34
CSMD1-214ENST00000524177 PCMTD1Q96MG8 357 aaPredicted RBP6.69□□□□□ -1.34
CSMD1-214ENST00000524177 C1orf115Q9H7X2 142 aa6.69□□□□□ -1.34
CSMD1-214ENST00000524177 SOBPA7XYQ1 873 aa6.68□□□□□ -1.34
CSMD1-214ENST00000524177 SSTR3P32745 418 aaPredicted RBP6.68□□□□□ -1.34
CSMD1-214ENST00000524177 PTPRNQ16849 979 aa6.68□□□□□ -1.34
CSMD1-214ENST00000524177 PURBQ96QR8 312 aaKnown RBP6.68□□□□□ -1.34
CSMD1-214ENST00000524177 EVA1BQ9NVM1 165 aa6.68□□□□□ -1.34
CSMD1-214ENST00000524177 MRPL14Q6P1L8 145 aaKnown RBP6.67□□□□□ -1.34
CSMD1-214ENST00000524177 ZNF511Q8NB15 262 aa6.67□□□□□ -1.34
CSMD1-214ENST00000524177 TIMP2P16035 220 aa6.66□□□□□ -1.34
CSMD1-214ENST00000524177 NDUFV2P19404 249 aa6.66□□□□□ -1.34
CSMD1-214ENST00000524177 VARSP26640 1264 aaKnown RBP6.66□□□□□ -1.34
CSMD1-214ENST00000524177 WDR4P57081 412 aaKnown RBP6.66□□□□□ -1.34
CSMD1-214ENST00000524177 KCNH2Q12809 1159 aa6.66□□□□□ -1.34
CSMD1-214ENST00000524177 SCARF1Q14162 830 aa6.66□□□□□ -1.34
CSMD1-214ENST00000524177 SPIRE2Q8WWL2 714 aa6.66□□□□□ -1.34
CSMD1-214ENST00000524177 BEGAINQ9BUH8 593 aa6.66□□□□□ -1.34
CSMD1-214ENST00000524177 ADH1CP00326 375 aa6.65□□□□□ -1.34
CSMD1-214ENST00000524177 MCM6Q14566 821 aa6.65□□□□□ -1.34
CSMD1-214ENST00000524177 SKIV2LQ15477 1246 aaKnown RBP6.65□□□□□ -1.34
CSMD1-214ENST00000524177 PRR7Q8TB68 274 aa6.65□□□□□ -1.34
CSMD1-214ENST00000524177 LOC100996750A0A140TA64 210 aa6.64□□□□□ -1.35
CSMD1-214ENST00000524177 KRTAP4-6Q9BYQ5 205 aa6.64□□□□□ -1.35
CSMD1-214ENST00000524177 MOXD2PA6NHM9 499 aa6.63□□□□□ -1.35
CSMD1-214ENST00000524177 MTMR2Q13614 643 aa6.63□□□□□ -1.35
CSMD1-214ENST00000524177 MYSM1Q5VVJ2 828 aa6.63□□□□□ -1.35
CSMD1-214ENST00000524177 MPNDQ8N594 471 aa6.63□□□□□ -1.35
CSMD1-214ENST00000524177 PROCA1Q8NCQ7 364 aaPredicted RBP6.63□□□□□ -1.35
CSMD1-214ENST00000524177 CLUAP1Q96AJ1 413 aa6.63□□□□□ -1.35
CSMD1-214ENST00000524177 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.63□□□□□ -1.35
CSMD1-214ENST00000524177 UBTFP17480 764 aaKnown RBP6.62□□□□□ -1.35
CSMD1-214ENST00000524177 A6NJR5 290 aa6.61□□□□□ -1.35
CSMD1-214ENST00000524177 ARID3CA6NKF2 412 aa6.61□□□□□ -1.35
CSMD1-214ENST00000524177 VSIG8P0DPA2 414 aa6.61□□□□□ -1.35
CSMD1-214ENST00000524177 CTHP32929 405 aa6.61□□□□□ -1.35
CSMD1-214ENST00000524177 ARID5BQ14865 1188 aa6.61□□□□□ -1.35
CSMD1-214ENST00000524177 KLF16Q9BXK1 252 aaPredicted RBP6.61□□□□□ -1.35
CSMD1-214ENST00000524177 ZFAND3Q9H8U3 227 aa6.61□□□□□ -1.35
CSMD1-214ENST00000524177 POLR3EQ9NVU0 708 aa6.61□□□□□ -1.35
CSMD1-214ENST00000524177 ZIC2O95409 532 aaPredicted RBP6.6□□□□□ -1.35
CSMD1-214ENST00000524177 CLK2P49760 499 aaKnown RBP6.6□□□□□ -1.35
CSMD1-214ENST00000524177 C6orf118Q5T5N4 469 aa6.6□□□□□ -1.35
CSMD1-214ENST00000524177 DESI1Q6ICB0 168 aa6.6□□□□□ -1.35
CSMD1-214ENST00000524177 FAM174AQ8TBP5 190 aa6.6□□□□□ -1.35
CSMD1-214ENST00000524177 FOXJ1Q92949 421 aa6.6□□□□□ -1.35
CSMD1-214ENST00000524177 SPDYE5A6NIY4 337 aa6.59□□□□□ -1.35
CSMD1-214ENST00000524177 MAN1A2O60476 641 aa6.59□□□□□ -1.35
CSMD1-214ENST00000524177 FBXO31Q5XUX0 539 aaPredicted RBP6.59□□□□□ -1.35
CSMD1-214ENST00000524177 ITPKCQ96DU7 683 aa6.59□□□□□ -1.35
CSMD1-214ENST00000524177 TBC1D2Q9BYX2 928 aa6.59□□□□□ -1.35
CSMD1-214ENST00000524177 APBB1O00213 710 aa6.58□□□□□ -1.36
CSMD1-214ENST00000524177 CDK15Q96Q40 435 aa6.58□□□□□ -1.36
CSMD1-214ENST00000524177 ARID3AQ99856 593 aa6.58□□□□□ -1.36
CSMD1-214ENST00000524177 MAP10Q9P2G4 905 aa6.58□□□□□ -1.36
CSMD1-214ENST00000524177 LIMD1Q9UGP4 676 aa6.58□□□□□ -1.36
CSMD1-214ENST00000524177 TRAK2O60296 914 aa6.57□□□□□ -1.36
CSMD1-214ENST00000524177 PPFIA3O75145 1194 aa6.57□□□□□ -1.36
CSMD1-214ENST00000524177 NR3C2P08235 984 aa6.57□□□□□ -1.36
CSMD1-214ENST00000524177 LYPD8Q6UX82 237 aa6.57□□□□□ -1.36
CSMD1-214ENST00000524177 POM121Q96HA1 1249 aa6.57□□□□□ -1.36
CSMD1-214ENST00000524177 CFAP99D6REC4 459 aa6.56□□□□□ -1.36
CSMD1-214ENST00000524177 BMP2P12643 396 aa6.56□□□□□ -1.36
CSMD1-214ENST00000524177 RFC5P40937 340 aa6.56□□□□□ -1.36
CSMD1-214ENST00000524177 SUZ12Q15022 739 aaKnown RBP6.56□□□□□ -1.36
CSMD1-214ENST00000524177 C4orf48Q5BLP8 95 aa6.56□□□□□ -1.36
CSMD1-214ENST00000524177 F12P00748 615 aaPredicted RBP6.55□□□□□ -1.36
CSMD1-214ENST00000524177 NR5A1Q13285 461 aa6.55□□□□□ -1.36
CSMD1-214ENST00000524177 AGERQ15109 404 aa6.55□□□□□ -1.36
CSMD1-214ENST00000524177 PROSER2Q86WR7 435 aaPredicted RBP6.55□□□□□ -1.36
CSMD1-214ENST00000524177 LINC00528Q8N1L1 170 aa6.55□□□□□ -1.36
CSMD1-214ENST00000524177 KCTD17Q8N5Z5 321 aa6.55□□□□□ -1.36
CSMD1-214ENST00000524177 PCDHB15Q9Y5E8 787 aa6.55□□□□□ -1.36
CSMD1-214ENST00000524177 UPP2O95045 317 aa6.54□□□□□ -1.36
CSMD1-214ENST00000524177 GRM5P41594 1212 aa6.54□□□□□ -1.36
CSMD1-214ENST00000524177 GSK3AP49840 483 aa6.54□□□□□ -1.36
CSMD1-214ENST00000524177 KCNMA1Q12791 1236 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms