RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 IL16Q14005 1332 aa12.88□□□□□ -0.35
SPIDR-225ENST00000524141 KIF16BQ96L93 1317 aa12.88□□□□□ -0.35
SPIDR-225ENST00000524141 TRAK1Q9UPV9 953 aa12.88□□□□□ -0.35
SPIDR-225ENST00000524141 HSP90AA1P07900 732 aaKnown RBP12.87□□□□□ -0.35
SPIDR-225ENST00000524141 C14orf93Q9H972 538 aaKnown RBP12.87□□□□□ -0.35
SPIDR-225ENST00000524141 ESPNB1AK53 854 aa12.87□□□□□ -0.35
SPIDR-225ENST00000524141 IPO8O15397 1037 aaKnown RBP12.87□□□□□ -0.35
SPIDR-225ENST00000524141 RRP9O43818 475 aaKnown RBP12.87□□□□□ -0.35
SPIDR-225ENST00000524141 TRIM44Q96DX7 344 aaPredicted RBP12.86□□□□□ -0.35
SPIDR-225ENST00000524141 EXOSC9Q06265 439 aaKnown RBP12.86□□□□□ -0.35
SPIDR-225ENST00000524141 SSH1Q8WYL5 1049 aa12.86□□□□□ -0.35
SPIDR-225ENST00000524141 EVC2Q86UK5 1308 aa12.86□□□□□ -0.35
SPIDR-225ENST00000524141 NUCB1Q02818 461 aa12.86□□□□□ -0.35
SPIDR-225ENST00000524141 TSR2Q969E8 191 aaKnown RBP12.86□□□□□ -0.35
SPIDR-225ENST00000524141 ZBTB40Q9NUA8 1239 aa12.86□□□□□ -0.35
SPIDR-225ENST00000524141 HSP90AB1P08238 724 aaKnown RBP12.85□□□□□ -0.35
SPIDR-225ENST00000524141 CFAP74Q9C0B2 1584 aa12.85□□□□□ -0.35
SPIDR-225ENST00000524141 TNPO1Q92973 898 aaKnown RBP12.85□□□□□ -0.35
SPIDR-225ENST00000524141 RPGRIP1LQ68CZ1 1315 aa12.84□□□□□ -0.35
SPIDR-225ENST00000524141 HSP90AA2PQ14568 343 aaPredicted RBP12.84□□□□□ -0.35
SPIDR-225ENST00000524141 RAB3GAP1Q15042 981 aa12.84□□□□□ -0.35
SPIDR-225ENST00000524141 BMP2KLQ5H9B9 411 aa12.84□□□□□ -0.35
SPIDR-225ENST00000524141 TMPOP42166 694 aaKnown RBP12.84□□□□□ -0.35
SPIDR-225ENST00000524141 CHMP4BQ9H444 224 aaKnown RBP12.84□□□□□ -0.35
SPIDR-225ENST00000524141 CD109Q6YHK3 1445 aa12.83□□□□□ -0.35
SPIDR-225ENST00000524141 TMEM57Q8N5G2 664 aa12.83□□□□□ -0.36
SPIDR-225ENST00000524141 NOB1Q9ULX3 412 aaKnown RBP12.83□□□□□ -0.36
SPIDR-225ENST00000524141 PLEKHF1Q96S99 279 aa12.83□□□□□ -0.36
SPIDR-225ENST00000524141 GLI2P10070 1586 aa12.82□□□□□ -0.36
SPIDR-225ENST00000524141 ALDH1L2Q3SY69 923 aa12.82□□□□□ -0.36
SPIDR-225ENST00000524141 CHD1LQ86WJ1 897 aa12.82□□□□□ -0.36
SPIDR-225ENST00000524141 ARHGEF28Q8N1W1 1705 aaKnown RBP12.82□□□□□ -0.36
SPIDR-225ENST00000524141 REREQ9P2R6 1566 aa12.82□□□□□ -0.36
SPIDR-225ENST00000524141 TRIM35Q9UPQ4 493 aa12.82□□□□□ -0.36
SPIDR-225ENST00000524141 TULP4Q9NRJ4 1543 aa12.82□□□□□ -0.36
SPIDR-225ENST00000524141 GOLGA6L22H0YM25 854 aa12.81□□□□□ -0.36
SPIDR-225ENST00000524141 CHGAP10645 457 aaKnown RBP12.81□□□□□ -0.36
SPIDR-225ENST00000524141 ZNF428Q96B54 188 aa12.81□□□□□ -0.36
SPIDR-225ENST00000524141 COL3A1P02461 1466 aaPredicted RBP12.81□□□□□ -0.36
SPIDR-225ENST00000524141 GCC1Q96CN9 775 aa12.81□□□□□ -0.36
SPIDR-225ENST00000524141 MED14O60244 1454 aa12.8□□□□□ -0.36
SPIDR-225ENST00000524141 ANKRD26Q9UPS8 1709 aa12.8□□□□□ -0.36
SPIDR-225ENST00000524141 IBTKQ9P2D0 1353 aaPredicted RBP12.8□□□□□ -0.36
SPIDR-225ENST00000524141 KIDINS220Q9ULH0 1771 aa12.8□□□□□ -0.36
SPIDR-225ENST00000524141 U2SURPO15042 1029 aaKnown RBP12.8□□□□□ -0.36
SPIDR-225ENST00000524141 LNPKQ9C0E8 428 aa12.8□□□□□ -0.36
SPIDR-225ENST00000524141 K7ELQ4 463 aaPredicted RBP12.8□□□□□ -0.36
SPIDR-225ENST00000524141 TPM2P07951 284 aa12.79□□□□□ -0.36
SPIDR-225ENST00000524141 BRPF1P55201 1214 aaPredicted RBP12.79□□□□□ -0.36
SPIDR-225ENST00000524141 CCDC173Q0VFZ6 552 aa12.79□□□□□ -0.36
SPIDR-225ENST00000524141 ANP32BQ92688 251 aaKnown RBP12.79□□□□□ -0.36
SPIDR-225ENST00000524141 TMEM132EQ6IEE7 984 aa12.79□□□□□ -0.36
SPIDR-225ENST00000524141 CLEC17AQ6ZS10 378 aa12.79□□□□□ -0.36
SPIDR-225ENST00000524141 ERBB4Q15303 1308 aa12.79□□□□□ -0.36
SPIDR-225ENST00000524141 CFAP44Q96MT7 982 aa12.78□□□□□ -0.36
SPIDR-225ENST00000524141 NPATQ14207 1427 aa12.78□□□□□ -0.36
SPIDR-225ENST00000524141 GAS2L3Q86XJ1 694 aa12.78□□□□□ -0.36
SPIDR-225ENST00000524141 RIPK4P57078 832 aa12.77□□□□□ -0.36
SPIDR-225ENST00000524141 KIF2CQ99661 725 aa12.77□□□□□ -0.36
SPIDR-225ENST00000524141 PPIP5K1Q6PFW1 1433 aa12.76□□□□□ -0.37
SPIDR-225ENST00000524141 A0A1W2PP64 1363 aa12.76□□□□□ -0.37
SPIDR-225ENST00000524141 KLHL40Q2TBA0 621 aa12.76□□□□□ -0.37
SPIDR-225ENST00000524141 PPP1R9BQ96SB3 815 aa12.76□□□□□ -0.37
SPIDR-225ENST00000524141 ARHGAP31Q2M1Z3 1444 aa12.76□□□□□ -0.37
SPIDR-225ENST00000524141 ARHGAP45Q92619 1136 aa12.75□□□□□ -0.37
SPIDR-225ENST00000524141 PIK3R4Q99570 1358 aa12.75□□□□□ -0.37
SPIDR-225ENST00000524141 CFAP65Q6ZU64 1925 aaKnown RBP12.75□□□□□ -0.37
SPIDR-225ENST00000524141 VGFO15240 615 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-225ENST00000524141 NASPP49321 788 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-225ENST00000524141 ANKRD45Q5TZF3 282 aa12.75□□□□□ -0.37
SPIDR-225ENST00000524141 TBC1D9Q6ZT07 1266 aa12.75□□□□□ -0.37
SPIDR-225ENST00000524141 CDC42BPGQ6DT37 1551 aa12.75□□□□□ -0.37
SPIDR-225ENST00000524141 HECW2Q9P2P5 1572 aa12.75□□□□□ -0.37
SPIDR-225ENST00000524141 ATAD2Q6PL18 1390 aa12.74□□□□□ -0.37
SPIDR-225ENST00000524141 DIAPH1O60610 1272 aaKnown RBP12.74□□□□□ -0.37
SPIDR-225ENST00000524141 TERF2IPQ9NYB0 399 aa12.74□□□□□ -0.37
SPIDR-225ENST00000524141 ZFYVE9O95405 1425 aa12.74□□□□□ -0.37
SPIDR-225ENST00000524141 PTCH1Q13635 1447 aa12.74□□□□□ -0.37
SPIDR-225ENST00000524141 ZSCAN30Q86W11 494 aa12.74□□□□□ -0.37
SPIDR-225ENST00000524141 CABP2Q9NPB3 220 aa12.74□□□□□ -0.37
SPIDR-225ENST00000524141 CAMSAP1Q5T5Y3 1602 aa12.73□□□□□ -0.37
SPIDR-225ENST00000524141 CDC45O75419 566 aa12.73□□□□□ -0.37
SPIDR-225ENST00000524141 CALD1Q05682 793 aaKnown RBP12.73□□□□□ -0.37
SPIDR-225ENST00000524141 PNPLA6Q8IY17 1366 aa12.73□□□□□ -0.37
SPIDR-225ENST00000524141 PIK3C2BO00750 1634 aa12.73□□□□□ -0.37
SPIDR-225ENST00000524141 ZBTB7BO15156 539 aaPredicted RBP12.73□□□□□ -0.37
SPIDR-225ENST00000524141 FCHSD2O94868 740 aa12.73□□□□□ -0.37
SPIDR-225ENST00000524141 DDX49Q9Y6V7 483 aaKnown RBP12.73□□□□□ -0.37
SPIDR-225ENST00000524141 NEXMIFQ5QGS0 1516 aa12.72□□□□□ -0.37
SPIDR-225ENST00000524141 CD2BP2O95400 341 aaKnown RBP12.72□□□□□ -0.37
SPIDR-225ENST00000524141 GGNBP2Q9H3C7 697 aa12.72□□□□□ -0.37
SPIDR-225ENST00000524141 PKNOX2Q96KN3 472 aa12.72□□□□□ -0.37
SPIDR-225ENST00000524141 BAG4O95429 457 aaKnown RBP12.71□□□□□ -0.37
SPIDR-225ENST00000524141 MSNP26038 577 aaKnown RBP12.71□□□□□ -0.37
SPIDR-225ENST00000524141 SSFA2P28290 1259 aa12.71□□□□□ -0.37
SPIDR-225ENST00000524141 NUCB2P80303 420 aa12.71□□□□□ -0.37
SPIDR-225ENST00000524141 RABEP1Q15276 862 aa12.71□□□□□ -0.37
SPIDR-225ENST00000524141 HS1BP3Q53T59 392 aa12.71□□□□□ -0.37
SPIDR-225ENST00000524141 VSIG10Q8N0Z9 540 aa12.71□□□□□ -0.37
SPIDR-225ENST00000524141 LRRC7Q96NW7 1537 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms