RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 EIF4G2P78344 907 aaKnown RBP eCLIP17.6■□□□□ 0.41
VEGFA-225ENST00000523950 CRYBG1Q9Y4K1 1723 aa17.6■□□□□ 0.41
VEGFA-225ENST00000523950 CPSF1Q10570 1443 aaKnown RBP17.59■□□□□ 0.41
VEGFA-225ENST00000523950 PAK3O75914 559 aaPredicted RBP17.59■□□□□ 0.41
VEGFA-225ENST00000523950 LMOD2Q6P5Q4 547 aa17.59■□□□□ 0.41
VEGFA-225ENST00000523950 NRKQ7Z2Y5 1582 aa17.57■□□□□ 0.4
VEGFA-225ENST00000523950 SSH2Q76I76 1423 aa17.57■□□□□ 0.4
VEGFA-225ENST00000523950 HAP1P54257 671 aaPredicted RBP17.56■□□□□ 0.4
VEGFA-225ENST00000523950 ZNF772Q68DY9 489 aaPredicted RBP17.56■□□□□ 0.4
VEGFA-225ENST00000523950 PHRF1Q9P1Y6 1649 aaKnown RBP17.56■□□□□ 0.4
VEGFA-225ENST00000523950 ADAMTS2O95450 1211 aa17.55■□□□□ 0.4
VEGFA-225ENST00000523950 C8orf37Q96NL8 207 aa17.55■□□□□ 0.4
VEGFA-225ENST00000523950 RGS17Q9UGC6 210 aaPredicted RBP17.55■□□□□ 0.4
VEGFA-225ENST00000523950 CD163L1Q9NR16 1453 aa17.55■□□□□ 0.4
VEGFA-225ENST00000523950 KTN1Q86UP2 1357 aaKnown RBP17.54■□□□□ 0.4
VEGFA-225ENST00000523950 TTC21AQ8NDW8 1320 aa17.54■□□□□ 0.4
VEGFA-225ENST00000523950 HDGFL2Q7Z4V5 671 aaPredicted RBP17.54■□□□□ 0.4
VEGFA-225ENST00000523950 TMC1Q8TDI8 760 aa17.54■□□□□ 0.4
VEGFA-225ENST00000523950 TERF2IPQ9NYB0 399 aa17.54■□□□□ 0.4
VEGFA-225ENST00000523950 PIK3C2AO00443 1686 aa17.53■□□□□ 0.4
VEGFA-225ENST00000523950 ABTB2Q8N961 1025 aa17.53■□□□□ 0.4
VEGFA-225ENST00000523950 NGLY1Q96IV0 654 aa17.53■□□□□ 0.4
VEGFA-225ENST00000523950 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.52■□□□□ 0.4
VEGFA-225ENST00000523950 AFF2P51816 1311 aa17.52■□□□□ 0.4
VEGFA-225ENST00000523950 HSPA5P11021 654 aaKnown RBP17.52■□□□□ 0.4
VEGFA-225ENST00000523950 NLRP13Q86W25 1043 aa17.52■□□□□ 0.4
VEGFA-225ENST00000523950 FNBP4Q8N3X1 1017 aaPredicted RBP17.52■□□□□ 0.4
VEGFA-225ENST00000523950 SLC12A5Q9H2X9 1139 aa17.52■□□□□ 0.4
VEGFA-225ENST00000523950 NWD2Q9ULI1 1742 aa17.52■□□□□ 0.39
VEGFA-225ENST00000523950 USP19O94966 1318 aa17.51■□□□□ 0.39
VEGFA-225ENST00000523950 TTC21BQ7Z4L5 1316 aa17.51■□□□□ 0.39
VEGFA-225ENST00000523950 EDC4Q6P2E9 1401 aaKnown RBP17.51■□□□□ 0.39
VEGFA-225ENST00000523950 CABLES1Q8TDN4 633 aa17.51■□□□□ 0.39
VEGFA-225ENST00000523950 USP54Q70EL1 1684 aa17.51■□□□□ 0.39
VEGFA-225ENST00000523950 A0A1W2PP64 1363 aa17.51■□□□□ 0.39
VEGFA-225ENST00000523950 ANKRD36BQ8N2N9 1353 aa17.51■□□□□ 0.39
VEGFA-225ENST00000523950 COL14A1Q05707 1796 aaKnown RBP17.51■□□□□ 0.39
VEGFA-225ENST00000523950 MYOM1P52179 1685 aa17.5■□□□□ 0.39
VEGFA-225ENST00000523950 PLCH1Q4KWH8 1693 aa17.49■□□□□ 0.39
VEGFA-225ENST00000523950 SLIT3O75094 1523 aa17.49■□□□□ 0.39
VEGFA-225ENST00000523950 SLIT2O94813 1529 aa17.49■□□□□ 0.39
VEGFA-225ENST00000523950 POTEAQ6S8J7 498 aa17.47■□□□□ 0.39
VEGFA-225ENST00000523950 USP21Q9UK80 565 aa17.47■□□□□ 0.39
VEGFA-225ENST00000523950 USP31Q70CQ4 1352 aa17.46■□□□□ 0.39
VEGFA-225ENST00000523950 NLRP6P59044 892 aa17.46■□□□□ 0.39
VEGFA-225ENST00000523950 BCL9LQ86UU0 1499 aa17.45■□□□□ 0.38
VEGFA-225ENST00000523950 CPDO75976 1380 aa17.45■□□□□ 0.38
VEGFA-225ENST00000523950 PLEKHG5O94827 1062 aa17.45■□□□□ 0.38
VEGFA-225ENST00000523950 NUTM2GQ5VZR2 741 aa17.45■□□□□ 0.38
VEGFA-225ENST00000523950 TRPC5Q9UL62 973 aaPredicted RBP17.45■□□□□ 0.38
VEGFA-225ENST00000523950 NRAPQ86VF7 1730 aa17.44■□□□□ 0.38
VEGFA-225ENST00000523950 ILDR2Q71H61 639 aa17.44■□□□□ 0.38
VEGFA-225ENST00000523950 ATRNO75882 1429 aa17.44■□□□□ 0.38
VEGFA-225ENST00000523950 CDK12Q9NYV4 1490 aaPredicted RBP17.44■□□□□ 0.38
VEGFA-225ENST00000523950 GCP02774 474 aa17.43■□□□□ 0.38
VEGFA-225ENST00000523950 UNC5CLQ8IV45 518 aa17.43■□□□□ 0.38
VEGFA-225ENST00000523950 KCNH5Q8NCM2 988 aa17.43■□□□□ 0.38
VEGFA-225ENST00000523950 PRDM11Q9NQV5 511 aa17.43■□□□□ 0.38
VEGFA-225ENST00000523950 KIAA0232Q92628 1395 aa17.42■□□□□ 0.38
VEGFA-225ENST00000523950 FAM83GA6ND36 823 aa17.42■□□□□ 0.38
VEGFA-225ENST00000523950 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.42■□□□□ 0.38
VEGFA-225ENST00000523950 QTRT2Q9H974 415 aaKnown RBP17.42■□□□□ 0.38
VEGFA-225ENST00000523950 RXRBP28702 533 aa17.41■□□□□ 0.38
VEGFA-225ENST00000523950 RBM6P78332 1123 aaKnown RBP17.41■□□□□ 0.38
VEGFA-225ENST00000523950 OVOS2A0A0J9YW53 1432 aa17.4■□□□□ 0.38
VEGFA-225ENST00000523950 OVOS2Q6IE36 1432 aa17.4■□□□□ 0.38
VEGFA-225ENST00000523950 LMO7Q8WWI1 1683 aa17.4■□□□□ 0.38
VEGFA-225ENST00000523950 KIF20BQ96Q89 1820 aa17.4■□□□□ 0.38
VEGFA-225ENST00000523950 NFAT5O94916 1531 aa17.39■□□□□ 0.37
VEGFA-225ENST00000523950 ABCC6O95255 1503 aa17.39■□□□□ 0.37
VEGFA-225ENST00000523950 ZC3H6P61129 1189 aaKnown RBP17.39■□□□□ 0.37
VEGFA-225ENST00000523950 VPS72Q15906 364 aa17.38■□□□□ 0.37
VEGFA-225ENST00000523950 NME9Q86XW9 330 aa17.38■□□□□ 0.37
VEGFA-225ENST00000523950 BTG4Q9NY30 223 aa17.38■□□□□ 0.37
VEGFA-225ENST00000523950 POLR3GLQ9BT43 218 aa17.37■□□□□ 0.37
VEGFA-225ENST00000523950 GJD4Q96KN9 370 aaPredicted RBP17.36■□□□□ 0.37
VEGFA-225ENST00000523950 AATKQ6ZMQ8 1374 aa17.36■□□□□ 0.37
VEGFA-225ENST00000523950 NSD3Q9BZ95 1437 aa17.36■□□□□ 0.37
VEGFA-225ENST00000523950 COL18A1P39060 1754 aa17.35■□□□□ 0.37
VEGFA-225ENST00000523950 CHRNA2Q15822 529 aa17.35■□□□□ 0.37
VEGFA-225ENST00000523950 COG3Q96JB2 828 aa17.35■□□□□ 0.37
VEGFA-225ENST00000523950 GLI3P10071 1580 aa17.35■□□□□ 0.37
VEGFA-225ENST00000523950 C11orf95C9JLR9 678 aaPredicted RBP17.34■□□□□ 0.37
VEGFA-225ENST00000523950 LTN1O94822 1766 aa17.34■□□□□ 0.37
VEGFA-225ENST00000523950 KIF7Q2M1P5 1343 aa17.34■□□□□ 0.37
VEGFA-225ENST00000523950 ARHGEF25Q86VW2 580 aa17.34■□□□□ 0.37
VEGFA-225ENST00000523950 ZRANB1Q9UGI0 708 aa17.34■□□□□ 0.37
VEGFA-225ENST00000523950 CAMTA1Q9Y6Y1 1673 aa17.34■□□□□ 0.37
VEGFA-225ENST00000523950 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.36
VEGFA-225ENST00000523950 CARD14Q9BXL6 1004 aa17.33■□□□□ 0.36
VEGFA-225ENST00000523950 COL5A2P05997 1499 aaPredicted RBP17.32■□□□□ 0.36
VEGFA-225ENST00000523950 RGS12O14924 1447 aa17.32■□□□□ 0.36
VEGFA-225ENST00000523950 FYB1O15117 783 aa17.32■□□□□ 0.36
VEGFA-225ENST00000523950 ANKRD26Q9UPS8 1709 aa17.32■□□□□ 0.36
VEGFA-225ENST00000523950 CGNL1Q0VF96 1302 aa17.31■□□□□ 0.36
VEGFA-225ENST00000523950 SOCS7O14512 581 aa17.31■□□□□ 0.36
VEGFA-225ENST00000523950 EVA1CP58658 441 aa17.3■□□□□ 0.36
VEGFA-225ENST00000523950 CCDC9Q9Y3X0 531 aaKnown RBP17.3■□□□□ 0.36
VEGFA-225ENST00000523950 CCDC7Q96M83 1385 aa17.29■□□□□ 0.36
VEGFA-225ENST00000523950 SPATA31A5Q5VU36 1347 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms